RNA–Protein interactions for RNA: ENST00000219299.8

CCDC113-201, Transcript of coiled-coil domain containing 113, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC113, Length 5,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-201ENST00000219299 IGFBP4P22692 258 aa9.8□□□□□ -0.84
CCDC113-201ENST00000219299 RANBP1P43487 201 aa9.8□□□□□ -0.84
CCDC113-201ENST00000219299 EPHB3P54753 998 aa9.8□□□□□ -0.84
CCDC113-201ENST00000219299 TTC30AQ86WT1 665 aa9.8□□□□□ -0.84
CCDC113-201ENST00000219299 RXFP2Q8WXD0 754 aa9.8□□□□□ -0.84
CCDC113-201ENST00000219299 SEMA4DQ92854 862 aa9.8□□□□□ -0.84
CCDC113-201ENST00000219299 INTUQ9ULD6 942 aa9.8□□□□□ -0.84
CCDC113-201ENST00000219299 EXOC1LA0A1B0GW35 172 aa9.79□□□□□ -0.84
CCDC113-201ENST00000219299 GOLGA8MH3BSY2 632 aa9.79□□□□□ -0.84
CCDC113-201ENST00000219299 CST8O60676 142 aa9.79□□□□□ -0.84
CCDC113-201ENST00000219299 ZNF189O75820 626 aaPredicted RBP9.79□□□□□ -0.84
CCDC113-201ENST00000219299 MYL4P12829 197 aa9.79□□□□□ -0.84
CCDC113-201ENST00000219299 SYN1P17600 705 aa9.79□□□□□ -0.84
CCDC113-201ENST00000219299 ADSSP30520 456 aa9.79□□□□□ -0.84
CCDC113-201ENST00000219299 SPARCL1Q14515 664 aa9.79□□□□□ -0.84
CCDC113-201ENST00000219299 CCDC137Q6PK04 289 aaKnown RBP9.79□□□□□ -0.84
CCDC113-201ENST00000219299 TMEM86AQ8N2M4 240 aa9.79□□□□□ -0.84
CCDC113-201ENST00000219299 PPWD1Q96BP3 646 aaKnown RBP9.79□□□□□ -0.84
CCDC113-201ENST00000219299 KLC2Q9H0B6 622 aa9.79□□□□□ -0.84
CCDC113-201ENST00000219299 EPC1Q9H2F5 836 aa9.79□□□□□ -0.84
CCDC113-201ENST00000219299 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.79□□□□□ -0.84
CCDC113-201ENST00000219299 AMACRQ9UHK6 382 aa9.79□□□□□ -0.84
CCDC113-201ENST00000219299 NUDT5Q9UKK9 219 aa9.79□□□□□ -0.84
CCDC113-201ENST00000219299 A0A1W2PQ45 241 aaPredicted RBP9.79□□□□□ -0.84
CCDC113-201ENST00000219299 A0A1W2PQY0 241 aa9.79□□□□□ -0.84
CCDC113-201ENST00000219299 APOL1O14791 398 aa9.79□□□□□ -0.84
CCDC113-201ENST00000219299 ATG7O95352 703 aa9.79□□□□□ -0.84
CCDC113-201ENST00000219299 MAP3K6O95382 1288 aa9.79□□□□□ -0.84
CCDC113-201ENST00000219299 LSM8O95777 96 aaKnown RBP9.79□□□□□ -0.84
CCDC113-201ENST00000219299 RPL9P32969 192 aaKnown RBP9.79□□□□□ -0.84
CCDC113-201ENST00000219299 EIF3EP60228 445 aaKnown RBP9.79□□□□□ -0.84
CCDC113-201ENST00000219299 BOLA3Q53S33 107 aa9.79□□□□□ -0.84
CCDC113-201ENST00000219299 LRRC43Q8N309 656 aa9.79□□□□□ -0.84
CCDC113-201ENST00000219299 CEP70Q8NHQ1 597 aa9.79□□□□□ -0.84
CCDC113-201ENST00000219299 PIP4K2CQ8TBX8 421 aa9.79□□□□□ -0.84
CCDC113-201ENST00000219299 EPS8L1Q8TE68 723 aa9.79□□□□□ -0.84
CCDC113-201ENST00000219299 GIPC2Q8TF65 315 aa9.79□□□□□ -0.84
CCDC113-201ENST00000219299 PABPC5Q96DU9 382 aaKnown RBP9.79□□□□□ -0.84
CCDC113-201ENST00000219299 FAM167BQ9BTA0 163 aa9.79□□□□□ -0.84
CCDC113-201ENST00000219299 C11orf49Q9H6J7 331 aa9.79□□□□□ -0.84
CCDC113-201ENST00000219299 DMAP1Q9NPF5 467 aaPredicted RBP9.79□□□□□ -0.84
CCDC113-201ENST00000219299 SMPD4Q9NXE4 827 aa9.79□□□□□ -0.84
CCDC113-201ENST00000219299 SMARCAL1Q9NZC9 954 aa9.79□□□□□ -0.84
CCDC113-201ENST00000219299 LRP5O75197 1615 aa9.79□□□□□ -0.84
CCDC113-201ENST00000219299 NAV1Q8NEY1 1877 aa9.79□□□□□ -0.84
CCDC113-201ENST00000219299 GYG2O15488 501 aa9.79□□□□□ -0.84
CCDC113-201ENST00000219299 MICAL2O94851 1124 aa9.79□□□□□ -0.84
CCDC113-201ENST00000219299 PDHA1P08559 390 aa9.79□□□□□ -0.84
CCDC113-201ENST00000219299 PAEPP09466 180 aa9.79□□□□□ -0.84
CCDC113-201ENST00000219299 FGFR1P11362 822 aa9.79□□□□□ -0.84
CCDC113-201ENST00000219299 CA4P22748 312 aa9.79□□□□□ -0.84
CCDC113-201ENST00000219299 MAGOHP61326 146 aaKnown RBP9.79□□□□□ -0.84
CCDC113-201ENST00000219299 CLEC16AQ2KHT3 1053 aa9.79□□□□□ -0.84
CCDC113-201ENST00000219299 SLC10A6Q3KNW5 377 aa9.79□□□□□ -0.84
CCDC113-201ENST00000219299 GRAMD1BQ3KR37 738 aa9.79□□□□□ -0.84
CCDC113-201ENST00000219299 EPM2AIP1Q7L775 607 aaPredicted RBP9.79□□□□□ -0.84
CCDC113-201ENST00000219299 RCOR2Q8IZ40 523 aa9.79□□□□□ -0.84
CCDC113-201ENST00000219299 C12orf29Q8N999 325 aa9.79□□□□□ -0.84
CCDC113-201ENST00000219299 SPATA4Q8NEY3 305 aa9.79□□□□□ -0.84
CCDC113-201ENST00000219299 TPCN2Q8NHX9 752 aa9.79□□□□□ -0.84
CCDC113-201ENST00000219299 NRBF2Q96F24 287 aa9.79□□□□□ -0.84
CCDC113-201ENST00000219299 CHMP6Q96FZ7 201 aa9.79□□□□□ -0.84
CCDC113-201ENST00000219299 SMARCD1Q96GM5 515 aa9.79□□□□□ -0.84
CCDC113-201ENST00000219299 FGD4Q96M96 766 aa9.79□□□□□ -0.84
CCDC113-201ENST00000219299 IGFLR1Q9H665 355 aa9.79□□□□□ -0.84
CCDC113-201ENST00000219299 MRPL17Q9NRX2 175 aaKnown RBP9.79□□□□□ -0.84
CCDC113-201ENST00000219299 TBK1Q9UHD2 729 aa9.79□□□□□ -0.84
CCDC113-201ENST00000219299 CAPN6Q9Y6Q1 641 aa9.79□□□□□ -0.84
CCDC113-201ENST00000219299 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.79□□□□□ -0.84
CCDC113-201ENST00000219299 GRID2IPA4D2P6 1211 aa9.79□□□□□ -0.84
CCDC113-201ENST00000219299 H0Y3Z8 333 aa9.79□□□□□ -0.84
CCDC113-201ENST00000219299 EEF2KO00418 725 aaKnown RBP9.79□□□□□ -0.84
CCDC113-201ENST00000219299 ZFXP17010 805 aaPredicted RBP9.79□□□□□ -0.84
CCDC113-201ENST00000219299 ZCWPW2Q504Y3 356 aa9.79□□□□□ -0.84
CCDC113-201ENST00000219299 MORN1Q5T089 497 aa9.79□□□□□ -0.84
CCDC113-201ENST00000219299 LRRC52Q8N7C0 313 aa9.79□□□□□ -0.84
CCDC113-201ENST00000219299 C1orf127Q8N9H9 656 aa9.79□□□□□ -0.84
CCDC113-201ENST00000219299 PXYLP1Q8TE99 480 aa9.79□□□□□ -0.84
CCDC113-201ENST00000219299 FAM172AQ8WUF8 416 aa9.79□□□□□ -0.84
CCDC113-201ENST00000219299 SHC3Q92529 594 aa9.79□□□□□ -0.84
CCDC113-201ENST00000219299 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.79□□□□□ -0.84
CCDC113-201ENST00000219299 SCYL1Q96KG9 808 aa9.79□□□□□ -0.84
CCDC113-201ENST00000219299 RPRD1AQ96P16 312 aaPredicted RBP9.79□□□□□ -0.84
CCDC113-201ENST00000219299 DDX50Q9BQ39 737 aaKnown RBP9.79□□□□□ -0.84
CCDC113-201ENST00000219299 OSBPL1AQ9BXW6 950 aa9.79□□□□□ -0.84
CCDC113-201ENST00000219299 MYH7P12883 1935 aa9.78□□□□□ -0.84
CCDC113-201ENST00000219299 SLC12A8A0AV02 714 aa9.78□□□□□ -0.84
CCDC113-201ENST00000219299 MYADML2A6NDP7 307 aa9.78□□□□□ -0.84
CCDC113-201ENST00000219299 ADCY6O43306 1168 aa9.78□□□□□ -0.84
CCDC113-201ENST00000219299 MBL2P11226 248 aaPredicted RBP9.78□□□□□ -0.84
CCDC113-201ENST00000219299 GPS1Q13098 491 aa9.78□□□□□ -0.84
CCDC113-201ENST00000219299 NR1H3Q13133 447 aa9.78□□□□□ -0.84
CCDC113-201ENST00000219299 DCLRE1AQ6PJP8 1040 aa9.78□□□□□ -0.84
CCDC113-201ENST00000219299 FSD1LQ9BXM9 530 aa9.78□□□□□ -0.84
CCDC113-201ENST00000219299 ELOVL4Q9GZR5 314 aa9.78□□□□□ -0.84
CCDC113-201ENST00000219299 FLRT1Q9NZU1 646 aa9.78□□□□□ -0.84
CCDC113-201ENST00000219299 PARNO95453 639 aaKnown RBP9.78□□□□□ -0.84
CCDC113-201ENST00000219299 AVPR1AP37288 418 aa9.78□□□□□ -0.84
CCDC113-201ENST00000219299 PDE1BQ01064 536 aa9.78□□□□□ -0.84
CCDC113-201ENST00000219299 ARHGAP15Q53QZ3 475 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms