RNA–Protein interactions for RNA: ENST00000216877.10

PTPRA-201, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-201ENST00000216877 MARSP56192 900 aaKnown RBP15.23■□□□□ 0.03
PTPRA-201ENST00000216877 PRR16Q569H4 304 aa15.23■□□□□ 0.03
PTPRA-201ENST00000216877 SUSD4Q5VX71 490 aa15.23■□□□□ 0.03
PTPRA-201ENST00000216877 DCDC5Q6ZRR9 648 aa15.23■□□□□ 0.03
PTPRA-201ENST00000216877 PASD1Q8IV76 773 aa15.23■□□□□ 0.03
PTPRA-201ENST00000216877 PDZD8Q8NEN9 1154 aa15.23■□□□□ 0.03
PTPRA-201ENST00000216877 WNK4Q96J92 1243 aa15.23■□□□□ 0.03
PTPRA-201ENST00000216877 QTRT2Q9H974 415 aaKnown RBP15.23■□□□□ 0.03
PTPRA-201ENST00000216877 DNAJB4Q9UDY4 337 aa15.23■□□□□ 0.03
PTPRA-201ENST00000216877 IQANK1A0A1B0GTG1 560 aa15.22■□□□□ 0.03
PTPRA-201ENST00000216877 EIF2AK2P19525 551 aaKnown RBP15.22■□□□□ 0.03
PTPRA-201ENST00000216877 PHKA2P46019 1235 aa15.22■□□□□ 0.03
PTPRA-201ENST00000216877 BMPR2Q13873 1038 aa15.22■□□□□ 0.03
PTPRA-201ENST00000216877 RGS21Q2M5E4 152 aa15.22■□□□□ 0.03
PTPRA-201ENST00000216877 SPDYAQ5MJ70 313 aa15.22■□□□□ 0.03
PTPRA-201ENST00000216877 SYDE1Q6ZW31 735 aaPredicted RBP15.22■□□□□ 0.03
PTPRA-201ENST00000216877 FBXO36Q8NEA4 188 aa15.22■□□□□ 0.03
PTPRA-201ENST00000216877 BORCS5Q969J3 196 aa15.22■□□□□ 0.03
PTPRA-201ENST00000216877 TMEM121Q9BTD3 319 aa15.22■□□□□ 0.03
PTPRA-201ENST00000216877 TRPV6Q9H1D0 765 aa15.22■□□□□ 0.03
PTPRA-201ENST00000216877 ZNF287Q9HBT7 754 aa15.22■□□□□ 0.03
PTPRA-201ENST00000216877 PCDH12Q9NPG4 1184 aa15.22■□□□□ 0.03
PTPRA-201ENST00000216877 BCL9O00512 1426 aa15.22■□□□□ 0.03
PTPRA-201ENST00000216877 TRIM49D1C9J1S8 452 aa15.22■□□□□ 0.03
PTPRA-201ENST00000216877 MED24O75448 989 aa15.22■□□□□ 0.03
PTPRA-201ENST00000216877 CSE1LP55060 971 aaKnown RBP15.22■□□□□ 0.03
PTPRA-201ENST00000216877 FAM196AQ6ZSG2 479 aa15.22■□□□□ 0.03
PTPRA-201ENST00000216877 ARHGEF19Q8IW93 802 aa15.22■□□□□ 0.03
PTPRA-201ENST00000216877 CPA5Q8WXQ8 436 aa15.22■□□□□ 0.03
PTPRA-201ENST00000216877 STARD8Q92502 1023 aa15.22■□□□□ 0.03
PTPRA-201ENST00000216877 SIAEQ9HAT2 523 aa15.22■□□□□ 0.03
PTPRA-201ENST00000216877 BCAP29Q9UHQ4 241 aa15.22■□□□□ 0.03
PTPRA-201ENST00000216877 TBC1D30Q9Y2I9 924 aa15.22■□□□□ 0.03
PTPRA-201ENST00000216877 ATRNO75882 1429 aa15.22■□□□□ 0.03
PTPRA-201ENST00000216877 KDM3AQ9Y4C1 1321 aa15.22■□□□□ 0.03
PTPRA-201ENST00000216877 A0A1W2PPW3 197 aa15.22■□□□□ 0.03
PTPRA-201ENST00000216877 TM9SF1O15321 606 aa15.22■□□□□ 0.03
PTPRA-201ENST00000216877 CYP2C9P11712 490 aa15.22■□□□□ 0.03
PTPRA-201ENST00000216877 HOXD13P35453 343 aa15.22■□□□□ 0.03
PTPRA-201ENST00000216877 EIF3EP60228 445 aaKnown RBP15.22■□□□□ 0.03
PTPRA-201ENST00000216877 RPS6P62753 249 aaKnown RBP15.22■□□□□ 0.03
PTPRA-201ENST00000216877 ADAM17P78536 824 aa15.22■□□□□ 0.03
PTPRA-201ENST00000216877 ATP13A4Q4VNC1 1196 aa15.22■□□□□ 0.03
PTPRA-201ENST00000216877 SLC30A10Q6XR72 485 aa15.22■□□□□ 0.03
PTPRA-201ENST00000216877 PSPC1Q8WXF1 523 aaKnown RBP15.22■□□□□ 0.03
PTPRA-201ENST00000216877 ZDHHC7Q9NXF8 308 aa15.22■□□□□ 0.03
PTPRA-201ENST00000216877 GPRC5DQ9NZD1 345 aa15.22■□□□□ 0.03
PTPRA-201ENST00000216877 CDC14AQ9UNH5 594 aa15.22■□□□□ 0.03
PTPRA-201ENST00000216877 GIT1Q9Y2X7 761 aa15.22■□□□□ 0.03
PTPRA-201ENST00000216877 NOX1Q9Y5S8 564 aa15.22■□□□□ 0.03
PTPRA-201ENST00000216877 LRP5O75197 1615 aa15.22■□□□□ 0.03
PTPRA-201ENST00000216877 E2F8A0AVK6 867 aa15.21■□□□□ 0.03
PTPRA-201ENST00000216877 FAM155BO75949 473 aa15.21■□□□□ 0.03
PTPRA-201ENST00000216877 LDHCP07864 332 aa15.21■□□□□ 0.03
PTPRA-201ENST00000216877 PICALMQ13492 652 aa15.21■□□□□ 0.03
PTPRA-201ENST00000216877 RINT1Q6NUQ1 792 aa15.21■□□□□ 0.03
PTPRA-201ENST00000216877 MYO1HQ8N1T3 1032 aa15.21■□□□□ 0.03
PTPRA-201ENST00000216877 USP33Q8TEY7 942 aa15.21■□□□□ 0.03
PTPRA-201ENST00000216877 KCNK4Q9NYG8 393 aa15.21■□□□□ 0.03
PTPRA-201ENST00000216877 COL4A1P02462 1669 aa15.21■□□□□ 0.03
PTPRA-201ENST00000216877 LYPLA1O75608 230 aaPredicted RBP15.21■□□□□ 0.03
PTPRA-201ENST00000216877 ENO3P13929 434 aaPredicted RBP15.21■□□□□ 0.03
PTPRA-201ENST00000216877 STIP1P31948 543 aaKnown RBP15.21■□□□□ 0.03
PTPRA-201ENST00000216877 STX3Q13277 289 aa15.21■□□□□ 0.03
PTPRA-201ENST00000216877 TMEM119Q4V9L6 283 aa15.21■□□□□ 0.03
PTPRA-201ENST00000216877 RTKN2Q8IZC4 609 aa15.21■□□□□ 0.03
PTPRA-201ENST00000216877 JADE3Q92613 823 aa15.21■□□□□ 0.03
PTPRA-201ENST00000216877 TAMM41Q96BW9 452 aa15.21■□□□□ 0.03
PTPRA-201ENST00000216877 DKK3Q9UBP4 350 aa15.21■□□□□ 0.03
PTPRA-201ENST00000216877 SLC24A2Q9UI40 661 aa15.21■□□□□ 0.03
PTPRA-201ENST00000216877 A0A1W2PQ67 120 aa15.21■□□□□ 0.03
PTPRA-201ENST00000216877 NOTOA8MTQ0 251 aa15.21■□□□□ 0.03
PTPRA-201ENST00000216877 DCXO43602 365 aa15.21■□□□□ 0.03
PTPRA-201ENST00000216877 MAP4P27816 1152 aaKnown RBP15.21■□□□□ 0.03
PTPRA-201ENST00000216877 NKX2-5P52952 324 aaPredicted RBP15.21■□□□□ 0.03
PTPRA-201ENST00000216877 PRKD1Q15139 912 aaPredicted RBP15.21■□□□□ 0.03
PTPRA-201ENST00000216877 NOP9Q86U38 636 aaKnown RBP15.21■□□□□ 0.03
PTPRA-201ENST00000216877 LRRC47Q8N1G4 583 aaKnown RBP15.21■□□□□ 0.03
PTPRA-201ENST00000216877 DAGLBQ8NCG7 672 aa15.21■□□□□ 0.03
PTPRA-201ENST00000216877 SERAC1Q96JX3 654 aa15.21■□□□□ 0.03
PTPRA-201ENST00000216877 NEURL2Q9BR09 285 aa15.21■□□□□ 0.03
PTPRA-201ENST00000216877 GIN1Q9NXP7 522 aa15.21■□□□□ 0.03
PTPRA-201ENST00000216877 CARD8Q9Y2G2 431 aa15.21■□□□□ 0.03
PTPRA-201ENST00000216877 DNAJC16Q9Y2G8 782 aa15.21■□□□□ 0.03
PTPRA-201ENST00000216877 GOLGA8IPA6NC78 632 aa15.2■□□□□ 0.02
PTPRA-201ENST00000216877 GOLGA8JA6NMD2 632 aa15.2■□□□□ 0.02
PTPRA-201ENST00000216877 CFAP99D6REC4 459 aa15.2■□□□□ 0.02
PTPRA-201ENST00000216877 RPA1P27694 616 aa15.2■□□□□ 0.02
PTPRA-201ENST00000216877 MZF1P28698 734 aaPredicted RBP15.2■□□□□ 0.02
PTPRA-201ENST00000216877 SLC16A2P36021 539 aa15.2■□□□□ 0.02
PTPRA-201ENST00000216877 ZNF76P36508 570 aa15.2■□□□□ 0.02
PTPRA-201ENST00000216877 NUDT2P50583 147 aa15.2■□□□□ 0.02
PTPRA-201ENST00000216877 CHRNDQ07001 517 aa15.2■□□□□ 0.02
PTPRA-201ENST00000216877 SNAPC2Q13487 334 aa15.2■□□□□ 0.02
PTPRA-201ENST00000216877 MAPKAPK5Q8IW41 473 aa15.2■□□□□ 0.02
PTPRA-201ENST00000216877 MARVELD2Q8N4S9 558 aa15.2■□□□□ 0.02
PTPRA-201ENST00000216877 SAE1Q9UBE0 346 aaPredicted RBP15.2■□□□□ 0.02
PTPRA-201ENST00000216877 PLA2G4CQ9UP65 541 aa15.2■□□□□ 0.02
PTPRA-201ENST00000216877 NUP98P52948 1817 aa15.2■□□□□ 0.02
PTPRA-201ENST00000216877 USP17L15C9J2P7 530 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms