RNA–Protein interactions for RNA: ENST00000216639.7

VRK1-201, Transcript of vaccinia related kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRK1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-201ENST00000216639 SLC35B2Q8TB61 432 aa18.2■□□□□ 0.5
VRK1-201ENST00000216639 KHSRPQ92945 711 aaKnown RBP eCLIP18.2■□□□□ 0.59e-7■■■□□ 16.1
VRK1-201ENST00000216639 HAUS1Q96CS2 278 aa18.2■□□□□ 0.5
VRK1-201ENST00000216639 UROC1Q96N76 676 aa18.2■□□□□ 0.5
VRK1-201ENST00000216639 PEBP4Q96S96 227 aa18.2■□□□□ 0.5
VRK1-201ENST00000216639 SYT15Q9BQS2 421 aa18.2■□□□□ 0.5
VRK1-201ENST00000216639 FOXP3Q9BZS1 431 aa18.2■□□□□ 0.5
VRK1-201ENST00000216639 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.2■□□□□ 0.5
VRK1-201ENST00000216639 CDH9Q9ULB4 789 aa18.2■□□□□ 0.5
VRK1-201ENST00000216639 APOC4-APOC2K7ER74 178 aa18.2■□□□□ 0.5
VRK1-201ENST00000216639 ATP2C2O75185 946 aa18.2■□□□□ 0.5
VRK1-201ENST00000216639 APOC2P02655 101 aa18.2■□□□□ 0.5
VRK1-201ENST00000216639 FAM200BP0CF97 657 aa18.2■□□□□ 0.5
VRK1-201ENST00000216639 CKBP12277 381 aa18.2■□□□□ 0.5
VRK1-201ENST00000216639 PCSK1P29120 753 aa18.2■□□□□ 0.5
VRK1-201ENST00000216639 TKTP29401 623 aaKnown RBP18.2■□□□□ 0.5
VRK1-201ENST00000216639 RDXP35241 583 aaKnown RBP18.2■□□□□ 0.5
VRK1-201ENST00000216639 LMAN1P49257 510 aa18.2■□□□□ 0.5
VRK1-201ENST00000216639 VPS41P49754 854 aa18.2■□□□□ 0.5
VRK1-201ENST00000216639 AFF1P51825 1210 aaKnown RBP18.2■□□□□ 0.5
VRK1-201ENST00000216639 OTUD4Q01804 1114 aaKnown RBP18.2■□□□□ 0.5
VRK1-201ENST00000216639 MDH1BQ5I0G3 518 aa18.2■□□□□ 0.5
VRK1-201ENST00000216639 IZUMO3Q5VZ72 239 aa18.2■□□□□ 0.5
VRK1-201ENST00000216639 RHBDF2Q6PJF5 856 aa18.2■□□□□ 0.5
VRK1-201ENST00000216639 PIGZQ86VD9 579 aa18.2■□□□□ 0.5
VRK1-201ENST00000216639 CCDC25Q86WR0 208 aa18.2■□□□□ 0.5
VRK1-201ENST00000216639 METTL23Q86XA0 190 aa18.2■□□□□ 0.5
VRK1-201ENST00000216639 VSIG1Q86XK7 387 aa18.2■□□□□ 0.5
VRK1-201ENST00000216639 ACTL9Q8TC94 416 aa18.2■□□□□ 0.5
VRK1-201ENST00000216639 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.2■□□□□ 0.5
VRK1-201ENST00000216639 KCTD13Q8WZ19 329 aa18.2■□□□□ 0.5
VRK1-201ENST00000216639 OSBPL7Q9BZF2 842 aa18.2■□□□□ 0.5
VRK1-201ENST00000216639 LRRC4Q9HBW1 653 aa18.2■□□□□ 0.5
VRK1-201ENST00000216639 STARD7Q9NQZ5 370 aa18.2■□□□□ 0.5
VRK1-201ENST00000216639 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.2■□□□□ 0.5
VRK1-201ENST00000216639 ARHGEF37A1IGU5 675 aa18.19■□□□□ 0.5
VRK1-201ENST00000216639 SGK1O00141 431 aa18.19■□□□□ 0.5
VRK1-201ENST00000216639 MDM4O15151 490 aa18.19■□□□□ 0.5
VRK1-201ENST00000216639 FKTNO75072 461 aa18.19■□□□□ 0.5
VRK1-201ENST00000216639 ENDOD1O94919 500 aa18.19■□□□□ 0.5
VRK1-201ENST00000216639 POMCP01189 267 aa18.19■□□□□ 0.5
VRK1-201ENST00000216639 CD48P09326 243 aa18.19■□□□□ 0.5
VRK1-201ENST00000216639 IBSPP21815 317 aaPredicted RBP18.19■□□□□ 0.5
VRK1-201ENST00000216639 ARSEP51690 589 aa18.19■□□□□ 0.5
VRK1-201ENST00000216639 TUSC3Q13454 348 aa18.19■□□□□ 0.5
VRK1-201ENST00000216639 ECHDC2Q86YB7 292 aa18.19■□□□□ 0.5
VRK1-201ENST00000216639 OR2W6PQ8NHA6 318 aa18.19■□□□□ 0.5
VRK1-201ENST00000216639 CENPHQ9H3R5 247 aa18.19■□□□□ 0.5
VRK1-201ENST00000216639 CACNG4Q9UBN1 327 aa18.19■□□□□ 0.5
VRK1-201ENST00000216639 DSEQ9UL01 958 aa18.19■□□□□ 0.5
VRK1-201ENST00000216639 A0A1W2PQ45 241 aaPredicted RBP18.18■□□□□ 0.5
VRK1-201ENST00000216639 A0A1W2PQY0 241 aa18.18■□□□□ 0.5
VRK1-201ENST00000216639 A6NNZ2 444 aa18.18■□□□□ 0.5
VRK1-201ENST00000216639 P3H1Q32P28 736 aa18.18■□□□□ 0.5
VRK1-201ENST00000216639 KRT71Q3SY84 523 aa18.18■□□□□ 0.5
VRK1-201ENST00000216639 TUBB8Q3ZCM7 444 aa18.18■□□□□ 0.5
VRK1-201ENST00000216639 KCTD16Q68DU8 428 aa18.18■□□□□ 0.5
VRK1-201ENST00000216639 SIX6OS1Q8N1H7 587 aa18.18■□□□□ 0.5
VRK1-201ENST00000216639 CLEC4CQ8WTT0 213 aa18.18■□□□□ 0.5
VRK1-201ENST00000216639 DDX23Q9BUQ8 820 aaKnown RBP18.18■□□□□ 0.5
VRK1-201ENST00000216639 PCDH9Q9HC56 1237 aa18.18■□□□□ 0.5
VRK1-201ENST00000216639 INPP5FQ9Y2H2 1132 aa18.18■□□□□ 0.5
VRK1-201ENST00000216639 PTCH2Q9Y6C5 1203 aa18.18■□□□□ 0.5
VRK1-201ENST00000216639 MCF2LO15068 1137 aa18.18■□□□□ 0.5
VRK1-201ENST00000216639 B3GAT3O94766 335 aa18.18■□□□□ 0.5
VRK1-201ENST00000216639 GRK4P32298 578 aa18.18■□□□□ 0.5
VRK1-201ENST00000216639 DMTNQ08495 405 aa18.18■□□□□ 0.5
VRK1-201ENST00000216639 ADIGQ0VDE8 80 aa18.18■□□□□ 0.5
VRK1-201ENST00000216639 DPYSL3Q14195 570 aa18.18■□□□□ 0.5
VRK1-201ENST00000216639 AGBL2Q5U5Z8 902 aa18.18■□□□□ 0.5
VRK1-201ENST00000216639 LHX8Q68G74 356 aa18.18■□□□□ 0.5
VRK1-201ENST00000216639 CYP4V2Q6ZWL3 525 aaPredicted RBP18.18■□□□□ 0.5
VRK1-201ENST00000216639 SLC43A3Q8NBI5 491 aa18.18■□□□□ 0.5
VRK1-201ENST00000216639 C3orf58Q8NDZ4 430 aa18.18■□□□□ 0.5
VRK1-201ENST00000216639 RSAD2Q8WXG1 361 aa18.18■□□□□ 0.5
VRK1-201ENST00000216639 CENPIQ92674 756 aaPredicted RBP18.18■□□□□ 0.5
VRK1-201ENST00000216639 TMEM121Q9BTD3 319 aa18.18■□□□□ 0.5
VRK1-201ENST00000216639 SEZ6LQ9BYH1 1024 aa18.18■□□□□ 0.5
VRK1-201ENST00000216639 TRPV6Q9H1D0 765 aa18.18■□□□□ 0.5
VRK1-201ENST00000216639 SEMA4AQ9H3S1 761 aa18.18■□□□□ 0.5
VRK1-201ENST00000216639 CRTAC1Q9NQ79 661 aa18.18■□□□□ 0.5
VRK1-201ENST00000216639 RGS18Q9NS28 235 aa18.18■□□□□ 0.5
VRK1-201ENST00000216639 KRT82Q9NSB4 513 aa18.18■□□□□ 0.5
VRK1-201ENST00000216639 KBTBD13C9JR72 458 aa18.17■□□□□ 0.5
VRK1-201ENST00000216639 CLDN5O00501 218 aa18.17■□□□□ 0.5
VRK1-201ENST00000216639 DNALI1O14645 258 aaPredicted RBP18.17■□□□□ 0.5
VRK1-201ENST00000216639 TP73O15350 636 aa18.17■□□□□ 0.5
VRK1-201ENST00000216639 RIPK2O43353 540 aa18.17■□□□□ 0.5
VRK1-201ENST00000216639 FBXO21O94952 628 aa18.17■□□□□ 0.5
VRK1-201ENST00000216639 EOMESO95936 686 aa18.17■□□□□ 0.5
VRK1-201ENST00000216639 MATKP42679 507 aa18.17■□□□□ 0.5
VRK1-201ENST00000216639 HDAC4P56524 1084 aa18.17■□□□□ 0.5
VRK1-201ENST00000216639 SLC29A2Q14542 456 aa18.17■□□□□ 0.5
VRK1-201ENST00000216639 TIGD5Q53EQ6 642 aa18.17■□□□□ 0.5
VRK1-201ENST00000216639 ERMARDQ5T6L9 678 aa18.17■□□□□ 0.5
VRK1-201ENST00000216639 HIBCHQ6NVY1 386 aaPredicted RBP18.17■□□□□ 0.5
VRK1-201ENST00000216639 CLEC20AQ6ZU45 233 aa18.17■□□□□ 0.5
VRK1-201ENST00000216639 PAQR9Q6ZVX9 377 aa18.17■□□□□ 0.5
VRK1-201ENST00000216639 STRADAQ7RTN6 431 aa18.17■□□□□ 0.5
VRK1-201ENST00000216639 PCGF5Q86SE9 256 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms