RNA–Protein interactions for RNA: ENST00000216038.5

RTCB-201, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTCB, Length 2,027 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-201ENST00000216038 PCDHB5Q9Y5E4 795 aa10.48□□□□□ -0.73
RTCB-201ENST00000216038 DOCK6Q96HP0 2047 aa10.48□□□□□ -0.73
RTCB-201ENST00000216038 PLXNA3P51805 1871 aa10.48□□□□□ -0.73
RTCB-201ENST00000216038 C2orf71A6NGG8 1288 aa10.48□□□□□ -0.73
RTCB-201ENST00000216038 H3BNC9 293 aa10.48□□□□□ -0.73
RTCB-201ENST00000216038 SEC24AO95486 1093 aa10.48□□□□□ -0.73
RTCB-201ENST00000216038 ERBB2P04626 1255 aa10.48□□□□□ -0.73
RTCB-201ENST00000216038 RB1P06400 928 aa10.48□□□□□ -0.73
RTCB-201ENST00000216038 MMP8P22894 467 aa10.48□□□□□ -0.73
RTCB-201ENST00000216038 RRM1P23921 792 aa10.48□□□□□ -0.73
RTCB-201ENST00000216038 CDH5P33151 784 aaPredicted RBP10.48□□□□□ -0.73
RTCB-201ENST00000216038 NDUFV1P49821 464 aa10.48□□□□□ -0.73
RTCB-201ENST00000216038 VAV2P52735 878 aa10.48□□□□□ -0.73
RTCB-201ENST00000216038 SLC8A3P57103 927 aa10.48□□□□□ -0.73
RTCB-201ENST00000216038 IFRD2Q12894 506 aaPredicted RBP10.48□□□□□ -0.73
RTCB-201ENST00000216038 NFE2Q16621 373 aaPredicted RBP10.48□□□□□ -0.73
RTCB-201ENST00000216038 MON1BQ7L1V2 547 aa10.48□□□□□ -0.73
RTCB-201ENST00000216038 RBM23Q86U06 439 aaKnown RBP10.48□□□□□ -0.73
RTCB-201ENST00000216038 MCOLN2Q8IZK6 566 aa10.48□□□□□ -0.73
RTCB-201ENST00000216038 MRPL43Q8N983 215 aaKnown RBP10.48□□□□□ -0.73
RTCB-201ENST00000216038 ZNF461Q8TAF7 563 aa10.48□□□□□ -0.73
RTCB-201ENST00000216038 CLEC4CQ8WTT0 213 aa10.48□□□□□ -0.73
RTCB-201ENST00000216038 NDRG1Q92597 394 aaKnown RBP10.48□□□□□ -0.73
RTCB-201ENST00000216038 ZNF653Q96CK0 615 aa10.48□□□□□ -0.73
RTCB-201ENST00000216038 PIWIL1Q96J94 861 aaKnown RBP10.48□□□□□ -0.73
RTCB-201ENST00000216038 SALL4Q9UJQ4 1053 aa10.48□□□□□ -0.73
RTCB-201ENST00000216038 LZTS1Q9Y250 596 aa10.48□□□□□ -0.73
RTCB-201ENST00000216038 COL6A3P12111 3177 aa10.48□□□□□ -0.73
RTCB-201ENST00000216038 ZNF638Q14966 1978 aaKnown RBP10.47□□□□□ -0.73
RTCB-201ENST00000216038 MACROD2A1Z1Q3 448 aa10.47□□□□□ -0.73
RTCB-201ENST00000216038 GOLGA8SH3BPF8 625 aa10.47□□□□□ -0.73
RTCB-201ENST00000216038 PER2O15055 1255 aa10.47□□□□□ -0.73
RTCB-201ENST00000216038 KLRC2P26717 231 aa10.47□□□□□ -0.73
RTCB-201ENST00000216038 PTP4A2Q12974 167 aa10.47□□□□□ -0.73
RTCB-201ENST00000216038 CFAP221Q4G0U5 840 aa10.47□□□□□ -0.73
RTCB-201ENST00000216038 CNPY4Q8N129 248 aa10.47□□□□□ -0.73
RTCB-201ENST00000216038 CEP112Q8N8E3 955 aa10.47□□□□□ -0.73
RTCB-201ENST00000216038 MSANTD4Q8NCY6 345 aa10.47□□□□□ -0.73
RTCB-201ENST00000216038 SCAMP5Q8TAC9 235 aa10.47□□□□□ -0.73
RTCB-201ENST00000216038 CTNNBL1Q8WYA6 563 aaPredicted RBP10.47□□□□□ -0.73
RTCB-201ENST00000216038 IRX2Q9BZI1 471 aaPredicted RBP10.47□□□□□ -0.73
RTCB-201ENST00000216038 VIPAS39Q9H9C1 493 aa10.47□□□□□ -0.73
RTCB-201ENST00000216038 CYP4F11Q9HBI6 524 aa10.47□□□□□ -0.73
RTCB-201ENST00000216038 DMAP1Q9NPF5 467 aaPredicted RBP10.47□□□□□ -0.73
RTCB-201ENST00000216038 GUCA1BQ9UMX6 200 aa10.47□□□□□ -0.73
RTCB-201ENST00000216038 CCDC189A1A4V9 331 aa10.46□□□□□ -0.73
RTCB-201ENST00000216038 ANKRD62A6NC57 917 aa10.46□□□□□ -0.73
RTCB-201ENST00000216038 XPO1O14980 1071 aaKnown RBP10.46□□□□□ -0.73
RTCB-201ENST00000216038 TGM5O43548 720 aa10.46□□□□□ -0.73
RTCB-201ENST00000216038 BUB1O43683 1085 aa10.46□□□□□ -0.73
RTCB-201ENST00000216038 GRAP2O75791 330 aa10.46□□□□□ -0.73
RTCB-201ENST00000216038 ABLIM3O94929 683 aa10.46□□□□□ -0.73
RTCB-201ENST00000216038 SETSIPP0DME0 302 aa10.46□□□□□ -0.73
RTCB-201ENST00000216038 MNAT1P51948 309 aa10.46□□□□□ -0.73
RTCB-201ENST00000216038 ADIGQ0VDE8 80 aa10.46□□□□□ -0.73
RTCB-201ENST00000216038 KIF5AQ12840 1032 aa10.46□□□□□ -0.73
RTCB-201ENST00000216038 TAF5Q15542 800 aa10.46□□□□□ -0.73
RTCB-201ENST00000216038 PHF13Q86YI8 300 aaPredicted RBP10.46□□□□□ -0.73
RTCB-201ENST00000216038 GIPC2Q8TF65 315 aa10.46□□□□□ -0.73
RTCB-201ENST00000216038 C18orf8Q96DM3 657 aa10.46□□□□□ -0.73
RTCB-201ENST00000216038 SAMD11Q96NU1 681 aa10.46□□□□□ -0.73
RTCB-201ENST00000216038 NOX5Q96PH1 765 aa10.46□□□□□ -0.73
RTCB-201ENST00000216038 KLHL5Q96PQ7 755 aa10.46□□□□□ -0.73
RTCB-201ENST00000216038 RXFP1Q9HBX9 757 aa10.46□□□□□ -0.73
RTCB-201ENST00000216038 CSNK1G1Q9HCP0 422 aa10.46□□□□□ -0.73
RTCB-201ENST00000216038 OSGEPQ9NPF4 335 aa10.46□□□□□ -0.73
RTCB-201ENST00000216038 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.46□□□□□ -0.73
RTCB-201ENST00000216038 FNIP2Q9P278 1114 aa10.46□□□□□ -0.73
RTCB-201ENST00000216038 STK39Q9UEW8 545 aa10.46□□□□□ -0.73
RTCB-201ENST00000216038 CNOT8Q9UFF9 292 aaKnown RBP10.46□□□□□ -0.73
RTCB-201ENST00000216038 ATP8B3O60423 1300 aa10.46□□□□□ -0.73
RTCB-201ENST00000216038 BRWD1Q9NSI6 2320 aa10.46□□□□□ -0.73
RTCB-201ENST00000216038 GREB1Q4ZG55 1949 aa10.46□□□□□ -0.74
RTCB-201ENST00000216038 HHLA1C9JL84 531 aa10.46□□□□□ -0.74
RTCB-201ENST00000216038 PRRG1O14668 218 aa10.46□□□□□ -0.74
RTCB-201ENST00000216038 ATF2P15336 505 aa10.46□□□□□ -0.74
RTCB-201ENST00000216038 ARHGAP25P42331 645 aa10.46□□□□□ -0.74
RTCB-201ENST00000216038 NAP1L1P55209 391 aaKnown RBP10.46□□□□□ -0.74
RTCB-201ENST00000216038 RNASE9P60153 205 aaKnown RBP10.46□□□□□ -0.74
RTCB-201ENST00000216038 GPC5P78333 572 aa10.46□□□□□ -0.74
RTCB-201ENST00000216038 SMAD3P84022 425 aaKnown RBP10.46□□□□□ -0.74
RTCB-201ENST00000216038 UBE3AQ05086 875 aa10.46□□□□□ -0.74
RTCB-201ENST00000216038 RAB33AQ14088 237 aa10.46□□□□□ -0.74
RTCB-201ENST00000216038 C10orf76Q5T2E6 689 aa10.46□□□□□ -0.74
RTCB-201ENST00000216038 SMYD5Q6GMV2 418 aa10.46□□□□□ -0.74
RTCB-201ENST00000216038 OR6B2Q6IFH4 312 aa10.46□□□□□ -0.74
RTCB-201ENST00000216038 FAM183BPQ6ZVS7 135 aa10.46□□□□□ -0.74
RTCB-201ENST00000216038 ADGRD2Q7Z7M1 963 aa10.46□□□□□ -0.74
RTCB-201ENST00000216038 XYLT1Q86Y38 959 aa10.46□□□□□ -0.74
RTCB-201ENST00000216038 MICALL1Q8N3F8 863 aa10.46□□□□□ -0.74
RTCB-201ENST00000216038 SLC35G2Q8TBE7 412 aa10.46□□□□□ -0.74
RTCB-201ENST00000216038 SPPL2BQ8TCT7 592 aa10.46□□□□□ -0.74
RTCB-201ENST00000216038 FUBP3Q96I24 572 aaKnown RBP eCLIP10.46□□□□□ -0.74
RTCB-201ENST00000216038 SLC4A5Q9BY07 1137 aa10.46□□□□□ -0.74
RTCB-201ENST00000216038 OXCT2Q9BYC2 517 aaPredicted RBP10.46□□□□□ -0.74
RTCB-201ENST00000216038 TRIM7Q9C029 511 aa10.46□□□□□ -0.74
RTCB-201ENST00000216038 LUC7LQ9NQ29 371 aaKnown RBP10.46□□□□□ -0.74
RTCB-201ENST00000216038 AFF4Q9UHB7 1163 aaKnown RBP10.46□□□□□ -0.74
RTCB-201ENST00000216038 COG5Q9UP83 839 aa10.46□□□□□ -0.74
RTCB-201ENST00000216038 COL4A4P53420 1690 aaPredicted RBP10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms