RNA–Protein interactions for RNA: ENST00000215956.9

SNU13-201, Transcript of small nuclear ribonucleoprotein 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNU13, Length 1,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-201ENST00000215956 MRPL17Q9NRX2 175 aaKnown RBP12.9□□□□□ -0.34
SNU13-201ENST00000215956 FAM105AQ9NUU6 356 aa12.9□□□□□ -0.34
SNU13-201ENST00000215956 WDR35Q9P2L0 1181 aa12.9□□□□□ -0.34
SNU13-201ENST00000215956 EPS15L1Q9UBC2 864 aa12.9□□□□□ -0.34
SNU13-201ENST00000215956 GIT1Q9Y2X7 761 aa12.9□□□□□ -0.34
SNU13-201ENST00000215956 CLUHO75153 1309 aa12.9□□□□□ -0.35
SNU13-201ENST00000215956 DOCK6Q96HP0 2047 aa12.89□□□□□ -0.35
SNU13-201ENST00000215956 TARSL2A2RTX5 802 aaKnown RBP12.89□□□□□ -0.35
SNU13-201ENST00000215956 CCDC66A2RUB6 948 aa12.89□□□□□ -0.35
SNU13-201ENST00000215956 MEFVO15553 781 aaPredicted RBP12.89□□□□□ -0.35
SNU13-201ENST00000215956 LILRB3O75022 631 aa12.89□□□□□ -0.35
SNU13-201ENST00000215956 SP9P0CG40 484 aa12.89□□□□□ -0.35
SNU13-201ENST00000215956 BRD3Q15059 726 aa12.89□□□□□ -0.35
SNU13-201ENST00000215956 SGO2Q562F6 1265 aa12.89□□□□□ -0.35
SNU13-201ENST00000215956 C9orf57Q5W0N0 161 aa12.89□□□□□ -0.35
SNU13-201ENST00000215956 ZNF280BQ86YH2 543 aa12.89□□□□□ -0.35
SNU13-201ENST00000215956 SLC44A3Q8N4M1 653 aa12.89□□□□□ -0.35
SNU13-201ENST00000215956 DCLK2Q8N568 766 aa12.89□□□□□ -0.35
SNU13-201ENST00000215956 ELMO3Q96BJ8 720 aa12.89□□□□□ -0.35
SNU13-201ENST00000215956 PARVAQ9NVD7 372 aa12.89□□□□□ -0.35
SNU13-201ENST00000215956 DLGAP2Q9P1A6 1054 aa12.89□□□□□ -0.35
SNU13-201ENST00000215956 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.89□□□□□ -0.35
SNU13-201ENST00000215956 POLIQ9UNA4 740 aa12.89□□□□□ -0.35
SNU13-201ENST00000215956 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.89□□□□□ -0.35
SNU13-201ENST00000215956 V9GYY5 206 aaPredicted RBP12.89□□□□□ -0.35
SNU13-201ENST00000215956 PATJQ8NI35 1801 aa12.89□□□□□ -0.35
SNU13-201ENST00000215956 SMIM28A0A1B0GU29 152 aa12.88□□□□□ -0.35
SNU13-201ENST00000215956 CCDC195A0A1B0GUA6 201 aa12.88□□□□□ -0.35
SNU13-201ENST00000215956 MYO1FO00160 1098 aa12.88□□□□□ -0.35
SNU13-201ENST00000215956 PGRMC1O00264 195 aaKnown RBP12.88□□□□□ -0.35
SNU13-201ENST00000215956 INPPL1O15357 1258 aa12.88□□□□□ -0.35
SNU13-201ENST00000215956 SPOPO43791 374 aa12.88□□□□□ -0.35
SNU13-201ENST00000215956 MMP8P22894 467 aa12.88□□□□□ -0.35
SNU13-201ENST00000215956 BRD2P25440 801 aaKnown RBP12.88□□□□□ -0.35
SNU13-201ENST00000215956 CTNNA2P26232 953 aa12.88□□□□□ -0.35
SNU13-201ENST00000215956 LRPAP1P30533 357 aa12.88□□□□□ -0.35
SNU13-201ENST00000215956 TAF6P49848 677 aa12.88□□□□□ -0.35
SNU13-201ENST00000215956 CNGA2Q16280 664 aa12.88□□□□□ -0.35
SNU13-201ENST00000215956 DPH6Q7L8W6 267 aa12.88□□□□□ -0.35
SNU13-201ENST00000215956 C1orf210Q8IVY1 113 aa12.88□□□□□ -0.35
SNU13-201ENST00000215956 RASGEF1CQ8N431 466 aa12.88□□□□□ -0.35
SNU13-201ENST00000215956 SPATA4Q8NEY3 305 aa12.88□□□□□ -0.35
SNU13-201ENST00000215956 URGCPQ8TCY9 931 aa12.88□□□□□ -0.35
SNU13-201ENST00000215956 GPR152Q8TDT2 470 aa12.88□□□□□ -0.35
SNU13-201ENST00000215956 COG1Q8WTW3 980 aa12.88□□□□□ -0.35
SNU13-201ENST00000215956 CPA5Q8WXQ8 436 aa12.88□□□□□ -0.35
SNU13-201ENST00000215956 NXPE3Q969Y0 559 aa12.88□□□□□ -0.35
SNU13-201ENST00000215956 CNTNAP3BQ96NU0 1288 aa12.88□□□□□ -0.35
SNU13-201ENST00000215956 MYADMQ96S97 322 aa12.88□□□□□ -0.35
SNU13-201ENST00000215956 RHOBTB2Q9BYZ6 727 aa12.88□□□□□ -0.35
SNU13-201ENST00000215956 CNTNAP3Q9BZ76 1288 aa12.88□□□□□ -0.35
SNU13-201ENST00000215956 SMYD3Q9H7B4 428 aa12.88□□□□□ -0.35
SNU13-201ENST00000215956 ARHGEF3Q9NR81 526 aa12.88□□□□□ -0.35
SNU13-201ENST00000215956 TTC7AQ9ULT0 858 aaPredicted RBP12.88□□□□□ -0.35
SNU13-201ENST00000215956 SIT1Q9Y3P8 196 aa12.88□□□□□ -0.35
SNU13-201ENST00000215956 ALG6Q9Y672 507 aa12.88□□□□□ -0.35
SNU13-201ENST00000215956 TDRD15B5MCY1 1934 aaKnown RBP12.88□□□□□ -0.35
SNU13-201ENST00000215956 GOLGA6L10A0A0M3HER8 536 aa12.88□□□□□ -0.35
SNU13-201ENST00000215956 CCDC188H7C350 402 aa12.88□□□□□ -0.35
SNU13-201ENST00000215956 PIRO00625 290 aa12.88□□□□□ -0.35
SNU13-201ENST00000215956 C2CD2LO14523 706 aa12.88□□□□□ -0.35
SNU13-201ENST00000215956 ZNF185O15231 689 aa12.88□□□□□ -0.35
SNU13-201ENST00000215956 CEP104O60308 925 aa12.88□□□□□ -0.35
SNU13-201ENST00000215956 ZNF623O75123 536 aa12.88□□□□□ -0.35
SNU13-201ENST00000215956 KRT37O76014 449 aa12.88□□□□□ -0.35
SNU13-201ENST00000215956 URODP06132 367 aa12.88□□□□□ -0.35
SNU13-201ENST00000215956 ADH1AP07327 375 aa12.88□□□□□ -0.35
SNU13-201ENST00000215956 AKAP5P24588 427 aa12.88□□□□□ -0.35
SNU13-201ENST00000215956 MAN1A1P33908 653 aa12.88□□□□□ -0.35
SNU13-201ENST00000215956 RAD23BP54727 409 aa12.88□□□□□ -0.35
SNU13-201ENST00000215956 MESDQ14696 234 aa12.88□□□□□ -0.35
SNU13-201ENST00000215956 MAP9Q49MG5 647 aa12.88□□□□□ -0.35
SNU13-201ENST00000215956 ZNF394Q53GI3 561 aa12.88□□□□□ -0.35
SNU13-201ENST00000215956 SEL1L2Q5TEA6 688 aa12.88□□□□□ -0.35
SNU13-201ENST00000215956 PLEKHA7Q6IQ23 1121 aa12.88□□□□□ -0.35
SNU13-201ENST00000215956 ELMSAN1Q6PJG2 1045 aa12.88□□□□□ -0.35
SNU13-201ENST00000215956 MRPL10Q7Z7H8 261 aaKnown RBP12.88□□□□□ -0.35
SNU13-201ENST00000215956 ERICH1Q86X53 443 aa12.88□□□□□ -0.35
SNU13-201ENST00000215956 DNAAF5Q86Y56 855 aa12.88□□□□□ -0.35
SNU13-201ENST00000215956 SMG8Q8ND04 991 aaKnown RBP12.88□□□□□ -0.35
SNU13-201ENST00000215956 LRRN4CLQ8ND94 238 aa12.88□□□□□ -0.35
SNU13-201ENST00000215956 IPO4Q8TEX9 1081 aaKnown RBP12.88□□□□□ -0.35
SNU13-201ENST00000215956 HEXIM2Q96MH2 286 aaKnown RBP12.88□□□□□ -0.35
SNU13-201ENST00000215956 C11orf70Q9BRQ4 267 aa12.88□□□□□ -0.35
SNU13-201ENST00000215956 GDAP2Q9NXN4 497 aa12.88□□□□□ -0.35
SNU13-201ENST00000215956 DPP7Q9UHL4 492 aa12.88□□□□□ -0.35
SNU13-201ENST00000215956 ANAPC7Q9UJX3 599 aa12.88□□□□□ -0.35
SNU13-201ENST00000215956 HES2Q9Y543 173 aa12.88□□□□□ -0.35
SNU13-201ENST00000215956 MAP1BP46821 2468 aaKnown RBP12.87□□□□□ -0.35
SNU13-201ENST00000215956 ZFHX4Q86UP3 3567 aa12.87□□□□□ -0.35
SNU13-201ENST00000215956 ARHGEF37A1IGU5 675 aa12.87□□□□□ -0.35
SNU13-201ENST00000215956 CCDC151A5D8V7 595 aa12.87□□□□□ -0.35
SNU13-201ENST00000215956 DDHD2O94830 711 aa12.87□□□□□ -0.35
SNU13-201ENST00000215956 GLUD1P00367 558 aa12.87□□□□□ -0.35
SNU13-201ENST00000215956 SOD2P04179 222 aa12.87□□□□□ -0.35
SNU13-201ENST00000215956 SETSIPP0DME0 302 aa12.87□□□□□ -0.35
SNU13-201ENST00000215956 RRM1P23921 792 aa12.87□□□□□ -0.35
SNU13-201ENST00000215956 RPL9P32969 192 aaKnown RBP12.87□□□□□ -0.35
SNU13-201ENST00000215956 GSCP56915 257 aaPredicted RBP12.87□□□□□ -0.35
SNU13-201ENST00000215956 RSPO4Q2I0M5 234 aaPredicted RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms