RNA–Protein interactions for RNA: ENST00000201963.3

DNMT3B-201, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 1 (best) BASIC

Gene DNMT3B, Length 4,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-201ENST00000201963 HABP4Q5JVS0 413 aaKnown RBP11.97□□□□□ -0.49
DNMT3B-201ENST00000201963 IFNEQ86WN2 208 aa11.97□□□□□ -0.49
DNMT3B-201ENST00000201963 CHST13Q8NET6 341 aa11.97□□□□□ -0.49
DNMT3B-201ENST00000201963 PRPF18Q99633 342 aaKnown RBP11.97□□□□□ -0.49
DNMT3B-201ENST00000201963 PORCNQ9H237 461 aa11.97□□□□□ -0.49
DNMT3B-201ENST00000201963 DMAP1Q9NPF5 467 aaPredicted RBP11.97□□□□□ -0.49
DNMT3B-201ENST00000201963 MRPL40Q9NQ50 206 aaKnown RBP11.97□□□□□ -0.49
DNMT3B-201ENST00000201963 STX18Q9P2W9 335 aaKnown RBP11.97□□□□□ -0.49
DNMT3B-201ENST00000201963 NHSQ6T4R5 1651 aa11.97□□□□□ -0.49
DNMT3B-201ENST00000201963 ATP9BO43861 1147 aa11.97□□□□□ -0.49
DNMT3B-201ENST00000201963 TBC1D12O60347 775 aa11.97□□□□□ -0.49
DNMT3B-201ENST00000201963 PGK1P00558 417 aa11.97□□□□□ -0.49
DNMT3B-201ENST00000201963 ICAM1P05362 532 aa11.97□□□□□ -0.49
DNMT3B-201ENST00000201963 PDGFRAP16234 1089 aa11.97□□□□□ -0.49
DNMT3B-201ENST00000201963 SERPINB9P50453 376 aa11.97□□□□□ -0.49
DNMT3B-201ENST00000201963 KRT76Q01546 638 aa11.97□□□□□ -0.49
DNMT3B-201ENST00000201963 PTK6Q13882 451 aa11.97□□□□□ -0.49
DNMT3B-201ENST00000201963 FASTKD1Q53R41 847 aaKnown RBP11.97□□□□□ -0.49
DNMT3B-201ENST00000201963 GJC2Q5T442 439 aaPredicted RBP11.97□□□□□ -0.49
DNMT3B-201ENST00000201963 OTOAQ7RTW8 1153 aa11.97□□□□□ -0.49
DNMT3B-201ENST00000201963 RNF148Q8N7C7 305 aa11.97□□□□□ -0.49
DNMT3B-201ENST00000201963 LRRC57Q8N9N7 239 aa11.97□□□□□ -0.49
DNMT3B-201ENST00000201963 EXD1Q8NHP7 514 aa11.97□□□□□ -0.49
DNMT3B-201ENST00000201963 GTF3C2Q8WUA4 911 aaPredicted RBP11.97□□□□□ -0.49
DNMT3B-201ENST00000201963 POLR3FQ9H1D9 316 aaPredicted RBP11.97□□□□□ -0.49
DNMT3B-201ENST00000201963 HMX1Q9NP08 348 aaPredicted RBP11.97□□□□□ -0.49
DNMT3B-201ENST00000201963 KCND2Q9NZV8 630 aa11.97□□□□□ -0.49
DNMT3B-201ENST00000201963 FAM237BA0A1B0GVD1 139 aa11.96□□□□□ -0.49
DNMT3B-201ENST00000201963 PQBP1O60828 265 aaKnown RBP11.96□□□□□ -0.49
DNMT3B-201ENST00000201963 EDF1O60869 148 aaKnown RBP11.96□□□□□ -0.49
DNMT3B-201ENST00000201963 PSMC3P17980 439 aa11.96□□□□□ -0.49
DNMT3B-201ENST00000201963 SERPINB5P36952 375 aa11.96□□□□□ -0.49
DNMT3B-201ENST00000201963 SERPINB8P50452 374 aa11.96□□□□□ -0.49
DNMT3B-201ENST00000201963 C16orf72Q14CZ0 275 aa11.96□□□□□ -0.49
DNMT3B-201ENST00000201963 GPAT2Q6NUI2 795 aa11.96□□□□□ -0.49
DNMT3B-201ENST00000201963 ZCCHC23Q6ZST2 131 aa11.96□□□□□ -0.49
DNMT3B-201ENST00000201963 MARK2Q7KZI7 788 aaKnown RBP11.96□□□□□ -0.49
DNMT3B-201ENST00000201963 DDI1Q8WTU0 396 aa11.96□□□□□ -0.49
DNMT3B-201ENST00000201963 UNC45AQ9H3U1 944 aa11.96□□□□□ -0.49
DNMT3B-201ENST00000201963 SLC12A4Q9UP95 1085 aa11.96□□□□□ -0.49
DNMT3B-201ENST00000201963 TCRBV7S2A1N4TA0A589 114 aa11.96□□□□□ -0.49
DNMT3B-201ENST00000201963 E9PBE3 544 aa11.96□□□□□ -0.49
DNMT3B-201ENST00000201963 KLHL41O60662 606 aa11.96□□□□□ -0.49
DNMT3B-201ENST00000201963 RPL10AP62906 217 aaKnown RBP11.96□□□□□ -0.49
DNMT3B-201ENST00000201963 TBCCQ15814 346 aa11.96□□□□□ -0.49
DNMT3B-201ENST00000201963 TFDP3Q5H9I0 405 aa11.96□□□□□ -0.49
DNMT3B-201ENST00000201963 C16orf89Q6UX73 402 aa11.96□□□□□ -0.49
DNMT3B-201ENST00000201963 CCNJLQ8IV13 435 aa11.96□□□□□ -0.49
DNMT3B-201ENST00000201963 ZNF786Q8N393 782 aa11.96□□□□□ -0.49
DNMT3B-201ENST00000201963 DCUN1D5Q9BTE7 237 aa11.96□□□□□ -0.49
DNMT3B-201ENST00000201963 GRIP2Q9C0E4 1043 aa11.96□□□□□ -0.49
DNMT3B-201ENST00000201963 RPF1Q9H9Y2 349 aaKnown RBP11.96□□□□□ -0.49
DNMT3B-201ENST00000201963 EBF2Q9HAK2 575 aa11.96□□□□□ -0.49
DNMT3B-201ENST00000201963 ZNF229Q9UJW7 825 aa11.96□□□□□ -0.49
DNMT3B-201ENST00000201963 SNX5Q9Y5X3 404 aa11.96□□□□□ -0.49
DNMT3B-201ENST00000201963 SPDYE16A6NNV3 312 aaPredicted RBP11.96□□□□□ -0.5
DNMT3B-201ENST00000201963 SYCE1LA8MT33 242 aa11.96□□□□□ -0.5
DNMT3B-201ENST00000201963 SMNDC1O75940 238 aaKnown RBP eCLIP11.96□□□□□ -0.59e-31■■■□□ 17.7
DNMT3B-201ENST00000201963 PSEN1P49768 467 aa11.96□□□□□ -0.5
DNMT3B-201ENST00000201963 RPS6KA3P51812 740 aa11.96□□□□□ -0.5
DNMT3B-201ENST00000201963 GABPAQ06546 454 aa11.96□□□□□ -0.5
DNMT3B-201ENST00000201963 SKIV2LQ15477 1246 aaKnown RBP11.96□□□□□ -0.5
DNMT3B-201ENST00000201963 WDR72Q3MJ13 1102 aa11.96□□□□□ -0.5
DNMT3B-201ENST00000201963 MFSD7Q6UXD7 560 aa11.96□□□□□ -0.5
DNMT3B-201ENST00000201963 PID1Q7Z2X4 250 aa11.96□□□□□ -0.5
DNMT3B-201ENST00000201963 RNF180Q86T96 592 aa11.96□□□□□ -0.5
DNMT3B-201ENST00000201963 SLC26A11Q86WA9 606 aa11.96□□□□□ -0.5
DNMT3B-201ENST00000201963 CDKL3Q8IVW4 592 aaPredicted RBP11.96□□□□□ -0.5
DNMT3B-201ENST00000201963 ZSWIM2Q8NEG5 633 aa11.96□□□□□ -0.5
DNMT3B-201ENST00000201963 CYGBQ8WWM9 190 aa11.96□□□□□ -0.5
DNMT3B-201ENST00000201963 PGBD4Q96DM1 585 aa11.96□□□□□ -0.5
DNMT3B-201ENST00000201963 PAK5Q9P286 719 aa11.96□□□□□ -0.5
DNMT3B-201ENST00000201963 SHOC2Q9UQ13 582 aa11.96□□□□□ -0.5
DNMT3B-201ENST00000201963 THSD7AQ9UPZ6 1657 aa11.96□□□□□ -0.5
DNMT3B-201ENST00000201963 GJB6O95452 261 aa11.95□□□□□ -0.5
DNMT3B-201ENST00000201963 CALCAP01258 141 aa11.95□□□□□ -0.5
DNMT3B-201ENST00000201963 PROCP04070 461 aa11.95□□□□□ -0.5
DNMT3B-201ENST00000201963 ELK3P41970 407 aa11.95□□□□□ -0.5
DNMT3B-201ENST00000201963 HDAC4P56524 1084 aa11.95□□□□□ -0.5
DNMT3B-201ENST00000201963 CATSPERGQ6ZRH7 1159 aa11.95□□□□□ -0.5
DNMT3B-201ENST00000201963 SV2AQ7L0J3 742 aa11.95□□□□□ -0.5
DNMT3B-201ENST00000201963 MYLK4Q86YV6 388 aaPredicted RBP11.95□□□□□ -0.5
DNMT3B-201ENST00000201963 MTMR14Q8NCE2 650 aa11.95□□□□□ -0.5
DNMT3B-201ENST00000201963 EPS8L1Q8TE68 723 aa11.95□□□□□ -0.5
DNMT3B-201ENST00000201963 HAS1Q92839 578 aa11.95□□□□□ -0.5
DNMT3B-201ENST00000201963 ZNF570Q96NI8 536 aa11.95□□□□□ -0.5
DNMT3B-201ENST00000201963 TRIM15Q9C019 465 aa11.95□□□□□ -0.5
DNMT3B-201ENST00000201963 IKZF4Q9H2S9 585 aa11.95□□□□□ -0.5
DNMT3B-201ENST00000201963 SNX25Q9H3E2 840 aa11.95□□□□□ -0.5
DNMT3B-201ENST00000201963 C10orf88Q9H8K7 445 aa11.95□□□□□ -0.5
DNMT3B-201ENST00000201963 LRFN2Q9ULH4 789 aa11.95□□□□□ -0.5
DNMT3B-201ENST00000201963 APOL1O14791 398 aa11.95□□□□□ -0.5
DNMT3B-201ENST00000201963 SRGAP2BP0DMP2 458 aa11.95□□□□□ -0.5
DNMT3B-201ENST00000201963 ETS1P14921 441 aa11.95□□□□□ -0.5
DNMT3B-201ENST00000201963 RAG1P15918 1043 aa11.95□□□□□ -0.5
DNMT3B-201ENST00000201963 ZFXP17010 805 aaPredicted RBP11.95□□□□□ -0.5
DNMT3B-201ENST00000201963 ABCD1P33897 745 aa11.95□□□□□ -0.5
DNMT3B-201ENST00000201963 TBL3Q12788 808 aaKnown RBP11.95□□□□□ -0.5
DNMT3B-201ENST00000201963 NPY5RQ15761 445 aa11.95□□□□□ -0.5
DNMT3B-201ENST00000201963 RAB44Q7Z6P3 723 aaPredicted RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms