RNA–Protein interactions for RNA: ENST00000075430.11

CTDP1-201, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CTDP1, Length 3,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-201ENST00000075430 GOLGA8NF8WBI6 632 aa17.44■□□□□ 0.38
CTDP1-201ENST00000075430 PFDN1O60925 122 aa17.44■□□□□ 0.38
CTDP1-201ENST00000075430 CYP1A1P04798 512 aaPredicted RBP17.44■□□□□ 0.38
CTDP1-201ENST00000075430 PEX2P28328 305 aa17.44■□□□□ 0.38
CTDP1-201ENST00000075430 EFHC2Q5JST6 749 aa17.44■□□□□ 0.38
CTDP1-201ENST00000075430 TRMT10BQ6PF06 316 aaKnown RBP17.44■□□□□ 0.38
CTDP1-201ENST00000075430 FAM160B2Q86V87 743 aa17.44■□□□□ 0.38
CTDP1-201ENST00000075430 DCAKDQ8WVC6 231 aa17.44■□□□□ 0.38
CTDP1-201ENST00000075430 ATG4CQ96DT6 458 aa17.44■□□□□ 0.38
CTDP1-201ENST00000075430 PTCD3Q96EY7 689 aaKnown RBP17.44■□□□□ 0.38
CTDP1-201ENST00000075430 C20orf27Q9GZN8 174 aa17.44■□□□□ 0.38
CTDP1-201ENST00000075430 MAGEB2O15479 319 aa17.44■□□□□ 0.38
CTDP1-201ENST00000075430 GTF2A2P52657 109 aa17.44■□□□□ 0.38
CTDP1-201ENST00000075430 CDC16Q13042 620 aa17.44■□□□□ 0.38
CTDP1-201ENST00000075430 ARHGAP22Q7Z5H3 698 aa17.44■□□□□ 0.38
CTDP1-201ENST00000075430 TFAP2BQ92481 460 aa17.44■□□□□ 0.38
CTDP1-201ENST00000075430 ACSS3Q9H6R3 686 aa17.44■□□□□ 0.38
CTDP1-201ENST00000075430 AVENQ9NQS1 362 aaPredicted RBP17.44■□□□□ 0.38
CTDP1-201ENST00000075430 NRAPQ86VF7 1730 aa17.44■□□□□ 0.38
CTDP1-201ENST00000075430 EGFRP00533 1210 aa17.43■□□□□ 0.38
CTDP1-201ENST00000075430 CCNG1P51959 295 aa17.43■□□□□ 0.38
CTDP1-201ENST00000075430 GCNT1Q02742 428 aa17.43■□□□□ 0.38
CTDP1-201ENST00000075430 C15orf59Q2T9L4 293 aaPredicted RBP17.43■□□□□ 0.38
CTDP1-201ENST00000075430 PTAR1Q7Z6K3 402 aaPredicted RBP17.43■□□□□ 0.38
CTDP1-201ENST00000075430 ZBTB46Q86UZ6 589 aa17.43■□□□□ 0.38
CTDP1-201ENST00000075430 ECSITQ9BQ95 431 aa17.43■□□□□ 0.38
CTDP1-201ENST00000075430 POLIQ9UNA4 740 aa17.43■□□□□ 0.38
CTDP1-201ENST00000075430 DNAJC16Q9Y2G8 782 aa17.43■□□□□ 0.38
CTDP1-201ENST00000075430 COL5A3P25940 1745 aaPredicted RBP17.43■□□□□ 0.38
CTDP1-201ENST00000075430 HNRNPRO43390 633 aaKnown RBP17.43■□□□□ 0.38
CTDP1-201ENST00000075430 ABHD2P08910 425 aa17.43■□□□□ 0.38
CTDP1-201ENST00000075430 RARBP10826 455 aa17.43■□□□□ 0.38
CTDP1-201ENST00000075430 GRIA1P42261 906 aa17.43■□□□□ 0.38
CTDP1-201ENST00000075430 CDKN2BP42772 138 aa17.43■□□□□ 0.38
CTDP1-201ENST00000075430 PGGT1BP53609 377 aa17.43■□□□□ 0.38
CTDP1-201ENST00000075430 AQP4P55087 323 aa17.43■□□□□ 0.38
CTDP1-201ENST00000075430 MED21Q13503 144 aa17.43■□□□□ 0.38
CTDP1-201ENST00000075430 HIC1Q14526 733 aa17.43■□□□□ 0.38
CTDP1-201ENST00000075430 SDCCAG8Q86SQ7 713 aaPredicted RBP17.43■□□□□ 0.38
CTDP1-201ENST00000075430 HPS6Q86YV9 775 aa17.43■□□□□ 0.38
CTDP1-201ENST00000075430 TMEM35BQ8NCS4 154 aa17.43■□□□□ 0.38
CTDP1-201ENST00000075430 ADAM32Q8TC27 787 aa17.43■□□□□ 0.38
CTDP1-201ENST00000075430 PHACTR1Q9C0D0 580 aa17.43■□□□□ 0.38
CTDP1-201ENST00000075430 RPAP3Q9H6T3 665 aaPredicted RBP17.43■□□□□ 0.38
CTDP1-201ENST00000075430 PCDH9Q9HC56 1237 aa17.43■□□□□ 0.38
CTDP1-201ENST00000075430 PICK1Q9NRD5 415 aa17.43■□□□□ 0.38
CTDP1-201ENST00000075430 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.43■□□□□ 0.38
CTDP1-201ENST00000075430 FIS1Q9Y3D6 152 aa17.43■□□□□ 0.38
CTDP1-201ENST00000075430 A0A0B4J269 797 aa17.43■□□□□ 0.38
CTDP1-201ENST00000075430 ZBTB7AO95365 584 aa17.43■□□□□ 0.38
CTDP1-201ENST00000075430 DLG1Q12959 904 aa17.43■□□□□ 0.38
CTDP1-201ENST00000075430 TMED1Q13445 227 aa17.43■□□□□ 0.38
CTDP1-201ENST00000075430 DENND1BQ6P3S1 775 aa17.43■□□□□ 0.38
CTDP1-201ENST00000075430 SYTL5Q8TDW5 730 aaPredicted RBP17.43■□□□□ 0.38
CTDP1-201ENST00000075430 ZNRF3Q9ULT6 936 aa17.43■□□□□ 0.38
CTDP1-201ENST00000075430 TMEM191CA6NGB0 347 aa17.42■□□□□ 0.38
CTDP1-201ENST00000075430 E7ENQ6 273 aa17.42■□□□□ 0.38
CTDP1-201ENST00000075430 E9PBE3 544 aa17.42■□□□□ 0.38
CTDP1-201ENST00000075430 KLHL41O60662 606 aa17.42■□□□□ 0.38
CTDP1-201ENST00000075430 TMEM191BP0C7N4 346 aa17.42■□□□□ 0.38
CTDP1-201ENST00000075430 SESN2P58004 480 aaPredicted RBP17.42■□□□□ 0.38
CTDP1-201ENST00000075430 COG7P83436 770 aa17.42■□□□□ 0.38
CTDP1-201ENST00000075430 PDE1BQ01064 536 aa17.42■□□□□ 0.38
CTDP1-201ENST00000075430 PRKCEQ02156 737 aa17.42■□□□□ 0.38
CTDP1-201ENST00000075430 LBRQ14739 615 aaKnown RBP17.42■□□□□ 0.38
CTDP1-201ENST00000075430 SFT2D3Q587I9 215 aa17.42■□□□□ 0.38
CTDP1-201ENST00000075430 MPP4Q96JB8 637 aa17.42■□□□□ 0.38
CTDP1-201ENST00000075430 RNF146Q9NTX7 359 aa17.42■□□□□ 0.38
CTDP1-201ENST00000075430 MRPL42Q9Y6G3 142 aaKnown RBP17.42■□□□□ 0.38
CTDP1-201ENST00000075430 AIM2O14862 343 aa17.42■□□□□ 0.38
CTDP1-201ENST00000075430 SLC26A4O43511 780 aa17.42■□□□□ 0.38
CTDP1-201ENST00000075430 KRT81Q14533 505 aa17.42■□□□□ 0.38
CTDP1-201ENST00000075430 STYK1Q6J9G0 422 aa17.42■□□□□ 0.38
CTDP1-201ENST00000075430 DEFB132Q7Z7B7 95 aa17.42■□□□□ 0.38
CTDP1-201ENST00000075430 WNK4Q96J92 1243 aa17.42■□□□□ 0.38
CTDP1-201ENST00000075430 VPS11Q9H270 941 aa17.42■□□□□ 0.38
CTDP1-201ENST00000075430 CISHQ9NSE2 258 aa17.42■□□□□ 0.38
CTDP1-201ENST00000075430 SEPT10Q9P0V9 454 aa17.42■□□□□ 0.38
CTDP1-201ENST00000075430 SHOC2Q9UQ13 582 aa17.42■□□□□ 0.38
CTDP1-201ENST00000075430 CAPN8A6NHC0 703 aa17.42■□□□□ 0.38
CTDP1-201ENST00000075430 HMGCS2P54868 508 aa17.42■□□□□ 0.38
CTDP1-201ENST00000075430 CXCL9Q07325 125 aa17.42■□□□□ 0.38
CTDP1-201ENST00000075430 STX3Q13277 289 aa17.42■□□□□ 0.38
CTDP1-201ENST00000075430 DPYSL3Q14195 570 aa17.42■□□□□ 0.38
CTDP1-201ENST00000075430 Q3C1V9 767 aa17.42■□□□□ 0.38
CTDP1-201ENST00000075430 ZACNQ401N2 412 aa17.42■□□□□ 0.38
CTDP1-201ENST00000075430 PLEKHA7Q6IQ23 1121 aa17.42■□□□□ 0.38
CTDP1-201ENST00000075430 ADGRD1Q6QNK2 874 aa17.42■□□□□ 0.38
CTDP1-201ENST00000075430 CEP128Q6ZU80 1094 aa17.42■□□□□ 0.38
CTDP1-201ENST00000075430 CCDC60Q8IWA6 550 aaPredicted RBP17.42■□□□□ 0.38
CTDP1-201ENST00000075430 KIAA0319LQ8IZA0 1049 aa17.42■□□□□ 0.38
CTDP1-201ENST00000075430 DEFB107AQ8IZN7 70 aa17.42■□□□□ 0.38
CTDP1-201ENST00000075430 ST13P4Q8IZP2 240 aaPredicted RBP17.42■□□□□ 0.38
CTDP1-201ENST00000075430 CEP120Q8N960 986 aa17.42■□□□□ 0.38
CTDP1-201ENST00000075430 APOPT1Q96IL0 206 aa17.42■□□□□ 0.38
CTDP1-201ENST00000075430 MAGEB5Q9BZ81 275 aa17.42■□□□□ 0.38
CTDP1-201ENST00000075430 PCDHA10Q9Y5I2 948 aa17.42■□□□□ 0.38
CTDP1-201ENST00000075430 ATP8B3O60423 1300 aa17.41■□□□□ 0.38
CTDP1-201ENST00000075430 WNT10BO00744 389 aa17.41■□□□□ 0.38
CTDP1-201ENST00000075430 OASLQ15646 514 aaKnown RBP17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms