RNA–Protein interactions for RNA: ENST00000006053.6

CX3CL1-201, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CL1, Length 3,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-201ENST00000006053 DNAJC6O75061 913 aa10.96□□□□□ -0.65
CX3CL1-201ENST00000006053 LDHAP00338 332 aaKnown RBP10.96□□□□□ -0.65
CX3CL1-201ENST00000006053 EDN1P05305 212 aa10.96□□□□□ -0.65
CX3CL1-201ENST00000006053 HIRAP54198 1017 aaPredicted RBP10.96□□□□□ -0.65
CX3CL1-201ENST00000006053 PSMC1P62191 440 aaKnown RBP10.96□□□□□ -0.65
CX3CL1-201ENST00000006053 AP1B1Q10567 949 aa10.96□□□□□ -0.65
CX3CL1-201ENST00000006053 ORC1Q13415 861 aa10.96□□□□□ -0.65
CX3CL1-201ENST00000006053 FAXCQ5TGI0 409 aa10.96□□□□□ -0.65
CX3CL1-201ENST00000006053 SLFN12LQ6IEE8 588 aa10.96□□□□□ -0.65
CX3CL1-201ENST00000006053 DENND1BQ6P3S1 775 aa10.96□□□□□ -0.65
CX3CL1-201ENST00000006053 TSHZ1Q6ZSZ6 1077 aa10.96□□□□□ -0.65
CX3CL1-201ENST00000006053 BBS12Q6ZW61 710 aa10.96□□□□□ -0.65
CX3CL1-201ENST00000006053 PRPF39Q86UA1 669 aaKnown RBP10.96□□□□□ -0.65
CX3CL1-201ENST00000006053 TREML1Q86YW5 311 aa10.96□□□□□ -0.65
CX3CL1-201ENST00000006053 CCNJLQ8IV13 435 aa10.96□□□□□ -0.65
CX3CL1-201ENST00000006053 KIAA0319LQ8IZA0 1049 aa10.96□□□□□ -0.65
CX3CL1-201ENST00000006053 SLC25A41Q8N5S1 370 aa10.96□□□□□ -0.65
CX3CL1-201ENST00000006053 ARFGAP1Q8N6T3 406 aa10.96□□□□□ -0.65
CX3CL1-201ENST00000006053 SMC1BQ8NDV3 1235 aa10.96□□□□□ -0.65
CX3CL1-201ENST00000006053 RDM1Q8NG50 284 aa10.96□□□□□ -0.65
CX3CL1-201ENST00000006053 SPATA18Q8TC71 538 aa10.96□□□□□ -0.65
CX3CL1-201ENST00000006053 WNK4Q96J92 1243 aa10.96□□□□□ -0.65
CX3CL1-201ENST00000006053 DNAAF2Q9NVR5 837 aaKnown RBP10.96□□□□□ -0.65
CX3CL1-201ENST00000006053 NXF1Q9UBU9 619 aaKnown RBP10.96□□□□□ -0.65
CX3CL1-201ENST00000006053 CNTN6Q9UQ52 1028 aa10.96□□□□□ -0.65
CX3CL1-201ENST00000006053 E7ESA3 106 aa10.96□□□□□ -0.66
CX3CL1-201ENST00000006053 KRT7P08729 469 aa10.96□□□□□ -0.66
CX3CL1-201ENST00000006053 PTPN7P35236 360 aa10.96□□□□□ -0.66
CX3CL1-201ENST00000006053 ALDH18A1P54886 795 aaKnown RBP10.96□□□□□ -0.66
CX3CL1-201ENST00000006053 IRX4P78413 519 aa10.96□□□□□ -0.66
CX3CL1-201ENST00000006053 SLC25A11Q02978 314 aaKnown RBP10.96□□□□□ -0.66
CX3CL1-201ENST00000006053 ENPEPQ07075 957 aa10.96□□□□□ -0.66
CX3CL1-201ENST00000006053 TMEM62Q0P6H9 643 aa10.96□□□□□ -0.66
CX3CL1-201ENST00000006053 TRPC3Q13507 836 aa10.96□□□□□ -0.66
CX3CL1-201ENST00000006053 KRT72Q14CN4 511 aa10.96□□□□□ -0.66
CX3CL1-201ENST00000006053 SPDYE2Q495Y8 402 aa10.96□□□□□ -0.66
CX3CL1-201ENST00000006053 PTPN20Q4JDL3 420 aa10.96□□□□□ -0.66
CX3CL1-201ENST00000006053 RSBN1LQ6PCB5 846 aaPredicted RBP10.96□□□□□ -0.66
CX3CL1-201ENST00000006053 VSIG10LQ86VR7 867 aa10.96□□□□□ -0.66
CX3CL1-201ENST00000006053 CHSY1Q86X52 802 aa10.96□□□□□ -0.66
CX3CL1-201ENST00000006053 RBM15BQ8NDT2 890 aaKnown RBP10.96□□□□□ -0.66
CX3CL1-201ENST00000006053 SLC44A1Q8WWI5 657 aa10.96□□□□□ -0.66
CX3CL1-201ENST00000006053 FAF2Q96CS3 445 aa10.96□□□□□ -0.66
CX3CL1-201ENST00000006053 RILPQ96NA2 401 aa10.96□□□□□ -0.66
CX3CL1-201ENST00000006053 ZNF184Q99676 751 aaPredicted RBP10.96□□□□□ -0.66
CX3CL1-201ENST00000006053 KRT82Q9NSB4 513 aa10.96□□□□□ -0.66
CX3CL1-201ENST00000006053 STRIP2Q9ULQ0 834 aa10.96□□□□□ -0.66
CX3CL1-201ENST00000006053 ASB3Q9Y575 518 aa10.96□□□□□ -0.66
CX3CL1-201ENST00000006053 CNTNAP2Q9UHC6 1331 aa10.96□□□□□ -0.66
CX3CL1-201ENST00000006053 CYB561D2O14569 222 aa10.96□□□□□ -0.66
CX3CL1-201ENST00000006053 CIB2O75838 187 aa10.96□□□□□ -0.66
CX3CL1-201ENST00000006053 TGDSO95455 350 aa10.96□□□□□ -0.66
CX3CL1-201ENST00000006053 DHRS4L1P0CG22 281 aa10.96□□□□□ -0.66
CX3CL1-201ENST00000006053 KCNA2P16389 499 aa10.96□□□□□ -0.66
CX3CL1-201ENST00000006053 ZNF132P52740 706 aa10.96□□□□□ -0.66
CX3CL1-201ENST00000006053 RTP1P59025 263 aa10.96□□□□□ -0.66
CX3CL1-201ENST00000006053 TFAMQ00059 246 aaKnown RBP10.96□□□□□ -0.66
CX3CL1-201ENST00000006053 BST1Q10588 318 aa10.96□□□□□ -0.66
CX3CL1-201ENST00000006053 MMRN1Q13201 1228 aa10.96□□□□□ -0.66
CX3CL1-201ENST00000006053 BMPR2Q13873 1038 aa10.96□□□□□ -0.66
CX3CL1-201ENST00000006053 C6orf163Q5TEZ5 329 aa10.96□□□□□ -0.66
CX3CL1-201ENST00000006053 ATG4CQ96DT6 458 aa10.96□□□□□ -0.66
CX3CL1-201ENST00000006053 FGD4Q96M96 766 aa10.96□□□□□ -0.66
CX3CL1-201ENST00000006053 GBP5Q96PP8 586 aa10.96□□□□□ -0.66
CX3CL1-201ENST00000006053 MAGEA13PA6NCF6 341 aa10.95□□□□□ -0.66
CX3CL1-201ENST00000006053 TTLL13PA6NNM8 815 aa10.95□□□□□ -0.66
CX3CL1-201ENST00000006053 H7C0C1 242 aa10.95□□□□□ -0.66
CX3CL1-201ENST00000006053 MAP3K6O95382 1288 aa10.95□□□□□ -0.66
CX3CL1-201ENST00000006053 LSM8O95777 96 aaKnown RBP10.95□□□□□ -0.66
CX3CL1-201ENST00000006053 ASS1P00966 412 aaKnown RBP10.95□□□□□ -0.66
CX3CL1-201ENST00000006053 ATP5OP48047 213 aa10.95□□□□□ -0.66
CX3CL1-201ENST00000006053 TAP1Q03518 808 aa10.95□□□□□ -0.66
CX3CL1-201ENST00000006053 CHI3L2Q15782 390 aa10.95□□□□□ -0.66
CX3CL1-201ENST00000006053 LRRN4Q8WUT4 740 aa10.95□□□□□ -0.66
CX3CL1-201ENST00000006053 ARHGEF4Q9NR80 690 aa10.95□□□□□ -0.66
CX3CL1-201ENST00000006053 ZNF212Q9UDV6 495 aa10.95□□□□□ -0.66
CX3CL1-201ENST00000006053 ANGPTL2Q9UKU9 493 aa10.95□□□□□ -0.66
CX3CL1-201ENST00000006053 A0A0B4J269 797 aa10.95□□□□□ -0.66
CX3CL1-201ENST00000006053 USP1O94782 785 aa10.95□□□□□ -0.66
CX3CL1-201ENST00000006053 YY1P25490 414 aa10.95□□□□□ -0.66
CX3CL1-201ENST00000006053 SLC18A2Q05940 514 aa10.95□□□□□ -0.66
CX3CL1-201ENST00000006053 XKR3Q5GH77 459 aa10.95□□□□□ -0.66
CX3CL1-201ENST00000006053 C1orf228Q6PIY5 440 aa10.95□□□□□ -0.66
CX3CL1-201ENST00000006053 IZUMO2Q6UXV1 221 aa10.95□□□□□ -0.66
CX3CL1-201ENST00000006053 RIPOR1Q6ZS17 1223 aa10.95□□□□□ -0.66
CX3CL1-201ENST00000006053 DPH6Q7L8W6 267 aa10.95□□□□□ -0.66
CX3CL1-201ENST00000006053 TMPRSS6Q8IU80 811 aa10.95□□□□□ -0.66
CX3CL1-201ENST00000006053 SCUBE1Q8IWY4 988 aa10.95□□□□□ -0.66
CX3CL1-201ENST00000006053 GALNT15Q8N3T1 639 aa10.95□□□□□ -0.66
CX3CL1-201ENST00000006053 GPRASP2Q96D09 838 aa10.95□□□□□ -0.66
CX3CL1-201ENST00000006053 NIF3L1Q9GZT8 377 aa10.95□□□□□ -0.66
CX3CL1-201ENST00000006053 RPAP3Q9H6T3 665 aaPredicted RBP10.95□□□□□ -0.66
CX3CL1-201ENST00000006053 RAB6BQ9NRW1 208 aa10.95□□□□□ -0.66
CX3CL1-201ENST00000006053 STYXL1Q9Y6J8 313 aa10.95□□□□□ -0.66
CX3CL1-201ENST00000006053 COL2A1P02458 1487 aaPredicted RBP10.95□□□□□ -0.66
CX3CL1-201ENST00000006053 SPECC1L-ADORA2AF8WAN1 911 aa10.94□□□□□ -0.66
CX3CL1-201ENST00000006053 CREB3O43889 395 aa10.94□□□□□ -0.66
CX3CL1-201ENST00000006053 RGS20O76081 388 aa10.94□□□□□ -0.66
CX3CL1-201ENST00000006053 POLR2BP30876 1174 aaKnown RBP10.94□□□□□ -0.66
CX3CL1-201ENST00000006053 RAP1GAPP47736 663 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms