RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Atg7Q9D906 698 aa23.75■■□□□ 1.39
Scn1b-201ENSMUST00000098548 Tmem174Q9DCX7 243 aa23.75■■□□□ 1.39
Scn1b-201ENSMUST00000098548 Gdf7P43029 461 aa23.74■■□□□ 1.39
Scn1b-201ENSMUST00000098548 Wfs1P56695 890 aa23.74■■□□□ 1.39
Scn1b-201ENSMUST00000098548 Gabrb2P63137 512 aa23.74■■□□□ 1.39
Scn1b-201ENSMUST00000098548 YwhahP68510 246 aaKnown RBP23.74■■□□□ 1.39
Scn1b-201ENSMUST00000098548 SbdsP70122 250 aa23.74■■□□□ 1.39
Scn1b-201ENSMUST00000098548 Ccdc57Q6PHN1 1016 aa23.74■■□□□ 1.39
Scn1b-201ENSMUST00000098548 Ntrk3Q6VNS1 825 aa23.74■■□□□ 1.39
Scn1b-201ENSMUST00000098548 Wdtc1Q80ZK9 677 aa23.74■■□□□ 1.39
Scn1b-201ENSMUST00000098548 Arhgap15Q811M1 481 aa23.74■■□□□ 1.39
Scn1b-201ENSMUST00000098548 Mill1Q8HWE7 395 aa23.74■■□□□ 1.39
Scn1b-201ENSMUST00000098548 Pcdhb19Q91Y01 801 aa23.74■■□□□ 1.39
Scn1b-201ENSMUST00000098548 Rab30Q923S9 203 aa23.74■■□□□ 1.39
Scn1b-201ENSMUST00000098548 Mis12Q9CY25 206 aa23.74■■□□□ 1.39
Scn1b-201ENSMUST00000098548 Mrpl4Q9DCU6 294 aaKnown RBP23.74■■□□□ 1.39
Scn1b-201ENSMUST00000098548 Tnni1Q9WUZ5 187 aa23.74■■□□□ 1.39
Scn1b-201ENSMUST00000098548 Atg2aQ6P4T0 1914 aa23.74■■□□□ 1.39
Scn1b-201ENSMUST00000098548 CitP49025 2055 aa23.74■■□□□ 1.39
Scn1b-201ENSMUST00000098548 Fam209A2APA5 170 aa23.74■■□□□ 1.39
Scn1b-201ENSMUST00000098548 March10E9PX79 788 aa23.74■■□□□ 1.39
Scn1b-201ENSMUST00000098548 Top6blJ3QMY9 579 aa23.74■■□□□ 1.39
Scn1b-201ENSMUST00000098548 PdgfraP26618 1089 aa23.74■■□□□ 1.39
Scn1b-201ENSMUST00000098548 NrlP54846 237 aa23.74■■□□□ 1.39
Scn1b-201ENSMUST00000098548 Tspyl5Q69ZB3 406 aa23.74■■□□□ 1.39
Scn1b-201ENSMUST00000098548 ScapQ6GQT6 1276 aa23.74■■□□□ 1.39
Scn1b-201ENSMUST00000098548 Ttc22Q8C159 568 aa23.74■■□□□ 1.39
Scn1b-201ENSMUST00000098548 Slfn5Q8CBA2 884 aa23.74■■□□□ 1.39
Scn1b-201ENSMUST00000098548 Syn3Q8JZP2 579 aa23.74■■□□□ 1.39
Scn1b-201ENSMUST00000098548 Fam151aQ8QZW3 608 aa23.74■■□□□ 1.39
Scn1b-201ENSMUST00000098548 DpysQ9EQF5 519 aa23.74■■□□□ 1.39
Scn1b-201ENSMUST00000098548 C6E9Q6D8 931 aa23.73■■□□□ 1.39
Scn1b-201ENSMUST00000098548 Gm5160F8VPN3 147 aa23.73■■□□□ 1.39
Scn1b-201ENSMUST00000098548 P01650 108 aa23.73■■□□□ 1.39
Scn1b-201ENSMUST00000098548 P01653 108 aa23.73■■□□□ 1.39
Scn1b-201ENSMUST00000098548 Camk4P08414 469 aa23.73■■□□□ 1.39
Scn1b-201ENSMUST00000098548 Pax3P24610 479 aa23.73■■□□□ 1.39
Scn1b-201ENSMUST00000098548 Kcnj6P48542 425 aa23.73■■□□□ 1.39
Scn1b-201ENSMUST00000098548 Stmn1P54227 149 aaKnown RBP23.73■■□□□ 1.39
Scn1b-201ENSMUST00000098548 Cpne7Q0VE82 557 aa23.73■■□□□ 1.39
Scn1b-201ENSMUST00000098548 Fut7Q11131 389 aa23.73■■□□□ 1.39
Scn1b-201ENSMUST00000098548 Rgs9bpQ148R9 237 aa23.73■■□□□ 1.39
Scn1b-201ENSMUST00000098548 Defb25Q30KN8 71 aa23.73■■□□□ 1.39
Scn1b-201ENSMUST00000098548 GstcdQ5RL51 634 aa23.73■■□□□ 1.39
Scn1b-201ENSMUST00000098548 PostnQ62009 838 aa23.73■■□□□ 1.39
Scn1b-201ENSMUST00000098548 Papd5Q68ED3 633 aaKnown RBP23.73■■□□□ 1.39
Scn1b-201ENSMUST00000098548 Rad9bQ6WBX7 403 aa23.73■■□□□ 1.39
Scn1b-201ENSMUST00000098548 Srrm3Q80WV7 648 aa23.73■■□□□ 1.39
Scn1b-201ENSMUST00000098548 Rnf168Q80XJ2 565 aa23.73■■□□□ 1.39
Scn1b-201ENSMUST00000098548 Fam193aQ8CGI1 1231 aaKnown RBP23.73■■□□□ 1.39
Scn1b-201ENSMUST00000098548 Ugp2Q91ZJ5 508 aa23.73■■□□□ 1.39
Scn1b-201ENSMUST00000098548 Fam49bQ921M7 324 aa23.73■■□□□ 1.39
Scn1b-201ENSMUST00000098548 Timp4Q9JHB3 224 aa23.73■■□□□ 1.39
Scn1b-201ENSMUST00000098548 4930402K13RikB1AW18 415 aa23.72■■□□□ 1.39
Scn1b-201ENSMUST00000098548 6030498E09RikB1AX85 169 aa23.72■■□□□ 1.39
Scn1b-201ENSMUST00000098548 Gm1661E9Q963 441 aa23.72■■□□□ 1.39
Scn1b-201ENSMUST00000098548 Edil3O35474 480 aa23.72■■□□□ 1.39
Scn1b-201ENSMUST00000098548 Slc26a1P58735 704 aa23.72■■□□□ 1.39
Scn1b-201ENSMUST00000098548 Atp8a1P70704 1164 aa23.72■■□□□ 1.39
Scn1b-201ENSMUST00000098548 Pi4k2aQ2TBE6 479 aa23.72■■□□□ 1.39
Scn1b-201ENSMUST00000098548 Cyp2j11Q3UNV2 504 aa23.72■■□□□ 1.39
Scn1b-201ENSMUST00000098548 Rab34Q64008 259 aa23.72■■□□□ 1.39
Scn1b-201ENSMUST00000098548 Zdhhc17Q80TN5 632 aa23.72■■□□□ 1.39
Scn1b-201ENSMUST00000098548 Nod1Q8BHB0 953 aa23.72■■□□□ 1.39
Scn1b-201ENSMUST00000098548 Nlrp4aQ8BU40 982 aa23.72■■□□□ 1.39
Scn1b-201ENSMUST00000098548 Pcdhb1Q91Y08 818 aa23.72■■□□□ 1.39
Scn1b-201ENSMUST00000098548 Oxct2bQ9ESL0 520 aa23.72■■□□□ 1.39
Scn1b-201ENSMUST00000098548 Cpb2Q9JHH6 422 aa23.72■■□□□ 1.39
Scn1b-201ENSMUST00000098548 Oxct2aQ9JJN4 520 aa23.72■■□□□ 1.39
Scn1b-201ENSMUST00000098548 GabrqQ9JLF1 638 aa23.72■■□□□ 1.39
Scn1b-201ENSMUST00000098548 Oaz3Q9R109 243 aa23.72■■□□□ 1.39
Scn1b-201ENSMUST00000098548 Trpv2Q9WTR1 756 aa23.72■■□□□ 1.39
Scn1b-201ENSMUST00000098548 Pck1Q9Z2V4 622 aa23.72■■□□□ 1.39
Scn1b-201ENSMUST00000098548 Rpl9-ps1S4R1R7 191 aa23.72■■□□□ 1.39
Scn1b-201ENSMUST00000098548 Olfr1305A2AVW3 312 aa23.71■■□□□ 1.39
Scn1b-201ENSMUST00000098548 Gm3371F7CQW8 167 aa23.71■■□□□ 1.39
Scn1b-201ENSMUST00000098548 Oaz2O08608 189 aa23.71■■□□□ 1.39
Scn1b-201ENSMUST00000098548 Rasgrf1P27671 1262 aa23.71■■□□□ 1.39
Scn1b-201ENSMUST00000098548 Epha3P29319 983 aa23.71■■□□□ 1.39
Scn1b-201ENSMUST00000098548 Arpp19P56212 112 aaKnown RBP23.71■■□□□ 1.39
Scn1b-201ENSMUST00000098548 Opa1P58281 960 aa23.71■■□□□ 1.39
Scn1b-201ENSMUST00000098548 B020004J07RikQ3UTC0 476 aa23.71■■□□□ 1.39
Scn1b-201ENSMUST00000098548 SkiQ60698 725 aa23.71■■□□□ 1.39
Scn1b-201ENSMUST00000098548 Slc20a1Q61609 681 aa23.71■■□□□ 1.39
Scn1b-201ENSMUST00000098548 Ttyh3Q6P5F7 524 aa23.71■■□□□ 1.39
Scn1b-201ENSMUST00000098548 Spag7Q7TNE3 227 aaKnown RBP23.71■■□□□ 1.39
Scn1b-201ENSMUST00000098548 LnpkQ7TQ95 425 aa23.71■■□□□ 1.39
Scn1b-201ENSMUST00000098548 Slc38a9Q8BGD6 560 aa23.71■■□□□ 1.39
Scn1b-201ENSMUST00000098548 Mtss1Q8R1S4 759 aa23.71■■□□□ 1.39
Scn1b-201ENSMUST00000098548 Adam33Q923W9 797 aa23.71■■□□□ 1.39
Scn1b-201ENSMUST00000098548 Smc6Q924W5 1097 aa23.71■■□□□ 1.39
Scn1b-201ENSMUST00000098548 Lztr1Q9CQ33 837 aa23.71■■□□□ 1.39
Scn1b-201ENSMUST00000098548 Iigp1Q9QZ85 413 aa23.71■■□□□ 1.39
Scn1b-201ENSMUST00000098548 Cog1Q9Z160 980 aa23.71■■□□□ 1.39
Scn1b-201ENSMUST00000098548 Zfp472B0V2W5 534 aa23.7■■□□□ 1.38
Scn1b-201ENSMUST00000098548 Foxp2P58463 714 aa23.7■■□□□ 1.38
Scn1b-201ENSMUST00000098548 Gdpd4Q3TT99 632 aa23.7■■□□□ 1.38
Scn1b-201ENSMUST00000098548 Cyp2c66Q5GLZ0 490 aa23.7■■□□□ 1.38
Scn1b-201ENSMUST00000098548 Gpt2Q8BGT5 522 aa23.7■■□□□ 1.38
Scn1b-201ENSMUST00000098548 Rhpn2Q8BWR8 686 aa23.7■■□□□ 1.38
Retrieved 100 of 22,080 RNA–protein pairs in 21.5 ms