RNA–Protein interactions for RNA: ENSMUST00000027127.13

Sf3b1-201, Transcript of Splicing factor 3B subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b1, Length 6,195 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1-201ENSMUST00000027127 FaxcQ3UMF9 409 aa8.8□□□□□ -1
Sf3b1-201ENSMUST00000027127 Cypt2Q6P924 180 aa8.8□□□□□ -1
Sf3b1-201ENSMUST00000027127 Prr18Q6PAN7 307 aa8.8□□□□□ -1
Sf3b1-201ENSMUST00000027127 Olfr1415Q7TQS4 311 aa8.8□□□□□ -1
Sf3b1-201ENSMUST00000027127 Snap47Q8R570 413 aa8.8□□□□□ -1
Sf3b1-201ENSMUST00000027127 Dnajc28Q8VCE1 385 aa8.8□□□□□ -1
Sf3b1-201ENSMUST00000027127 Evi2bQ8VD58 444 aa8.8□□□□□ -1
Sf3b1-201ENSMUST00000027127 Olfr1416Q8VGU4 312 aa8.8□□□□□ -1
Sf3b1-201ENSMUST00000027127 Akr1c14Q91WT7 323 aa8.8□□□□□ -1
Sf3b1-201ENSMUST00000027127 Dtnbp1Q91WZ8 352 aa8.8□□□□□ -1
Sf3b1-201ENSMUST00000027127 Fam212aQ9CX62 282 aa8.8□□□□□ -1
Sf3b1-201ENSMUST00000027127 Pgm1Q9D0F9 562 aa8.8□□□□□ -1
Sf3b1-201ENSMUST00000027127 Spin2fJ3QPU0 254 aa8.8□□□□□ -1
Sf3b1-201ENSMUST00000027127 HpdP49429 393 aa8.8□□□□□ -1
Sf3b1-201ENSMUST00000027127 Myl2P51667 166 aa8.8□□□□□ -1
Sf3b1-201ENSMUST00000027127 Ubxn2bQ0KL01 331 aa8.8□□□□□ -1
Sf3b1-201ENSMUST00000027127 Rxfp1Q6R6I7 758 aa8.8□□□□□ -1
Sf3b1-201ENSMUST00000027127 Slc25a11Q9CR62 314 aaKnown RBP8.8□□□□□ -1
Sf3b1-201ENSMUST00000027127 Oxct1Q9D0K2 520 aaKnown RBP8.8□□□□□ -1
Sf3b1-201ENSMUST00000027127 Polr3cQ9D483 533 aa8.8□□□□□ -1
Sf3b1-201ENSMUST00000027127 Ccdc88aQ5SNZ0 1873 aa8.8□□□□□ -1
Sf3b1-201ENSMUST00000027127 Gm3187M0QWW3 260 aa8.8□□□□□ -1
Sf3b1-201ENSMUST00000027127 Klc2O88448 599 aa8.8□□□□□ -1
Sf3b1-201ENSMUST00000027127 Crabp2P22935 138 aa8.8□□□□□ -1
Sf3b1-201ENSMUST00000027127 Rpl22P67984 128 aaKnown RBP8.8□□□□□ -1
Sf3b1-201ENSMUST00000027127 Ugt1a2P70691 533 aa8.8□□□□□ -1
Sf3b1-201ENSMUST00000027127 Arhgap17Q3UIA2 846 aa8.8□□□□□ -1
Sf3b1-201ENSMUST00000027127 Ppp1r12cQ3UMT1 782 aa8.8□□□□□ -1
Sf3b1-201ENSMUST00000027127 Mapre1Q61166 268 aaKnown RBP8.8□□□□□ -1
Sf3b1-201ENSMUST00000027127 Zfp943Q6NZP4 507 aa8.8□□□□□ -1
Sf3b1-201ENSMUST00000027127 PoliQ6R3M4 717 aa8.8□□□□□ -1
Sf3b1-201ENSMUST00000027127 VcpkmtQ8C436 228 aa8.8□□□□□ -1
Sf3b1-201ENSMUST00000027127 Pih1h3bQ8C6P5 218 aa8.8□□□□□ -1
Sf3b1-201ENSMUST00000027127 Slc15a5Q8CBB2 566 aa8.8□□□□□ -1
Sf3b1-201ENSMUST00000027127 Q8CD60 292 aa8.8□□□□□ -1
Sf3b1-201ENSMUST00000027127 Cd300ldQ8VCH2 221 aa8.8□□□□□ -1
Sf3b1-201ENSMUST00000027127 Kifc1Q9QWT9 674 aa8.8□□□□□ -1
Sf3b1-201ENSMUST00000027127 Celf2Q9Z0H4 508 aaKnown RBP8.8□□□□□ -1
Sf3b1-201ENSMUST00000027127 Ggt5Q9Z2A9 573 aa8.8□□□□□ -1
Sf3b1-201ENSMUST00000027127 Olfr271-ps1A0A1L1SQH2 283 aa8.8□□□□□ -1
Sf3b1-201ENSMUST00000027127 F6Y6L6 278 aa8.8□□□□□ -1
Sf3b1-201ENSMUST00000027127 Cbx2P30658 519 aa8.8□□□□□ -1
Sf3b1-201ENSMUST00000027127 EdnrbP48302 442 aa8.8□□□□□ -1
Sf3b1-201ENSMUST00000027127 LipeP54310 759 aa8.8□□□□□ -1
Sf3b1-201ENSMUST00000027127 KhsrpQ3U0V1 748 aaKnown RBP8.8□□□□□ -1
Sf3b1-201ENSMUST00000027127 Q3UTZ3 580 aa8.8□□□□□ -1
Sf3b1-201ENSMUST00000027127 Etaa1Q5SVT3 877 aa8.8□□□□□ -1
Sf3b1-201ENSMUST00000027127 Kiaa1841Q68FF0 718 aa8.8□□□□□ -1
Sf3b1-201ENSMUST00000027127 Slain1Q68FF7 579 aa8.8□□□□□ -1
Sf3b1-201ENSMUST00000027127 Gpatch2lQ6PE65 482 aa8.8□□□□□ -1
Sf3b1-201ENSMUST00000027127 Tas2r102Q7M717 329 aa8.8□□□□□ -1
Sf3b1-201ENSMUST00000027127 Olfr389Q7TRX7 312 aa8.8□□□□□ -1
Sf3b1-201ENSMUST00000027127 Zfp454Q80Y34 536 aa8.8□□□□□ -1
Sf3b1-201ENSMUST00000027127 Rmnd1Q8CI78 450 aa8.8□□□□□ -1
Sf3b1-201ENSMUST00000027127 Colgalt1Q8K297 617 aa8.8□□□□□ -1
Sf3b1-201ENSMUST00000027127 Ssu72Q9CY97 194 aaKnown RBP8.8□□□□□ -1
Sf3b1-201ENSMUST00000027127 Dcaf6Q9DC22 876 aa8.8□□□□□ -1
Sf3b1-201ENSMUST00000027127 Zfp626A0A0U1RQ84 676 aa8.8□□□□□ -1
Sf3b1-201ENSMUST00000027127 Ccdc175E9PVB3 822 aa8.8□□□□□ -1
Sf3b1-201ENSMUST00000027127 Gm7694J3QNH8 270 aa8.8□□□□□ -1
Sf3b1-201ENSMUST00000027127 Cacna2d1O08532 1103 aa8.8□□□□□ -1
Sf3b1-201ENSMUST00000027127 Tsta3P23591 321 aa8.8□□□□□ -1
Sf3b1-201ENSMUST00000027127 Gpd1lQ3ULJ0 351 aa8.8□□□□□ -1
Sf3b1-201ENSMUST00000027127 Serpinb6Q60854 378 aa8.8□□□□□ -1
Sf3b1-201ENSMUST00000027127 PrkciQ62074 595 aaKnown RBP8.8□□□□□ -1
Sf3b1-201ENSMUST00000027127 Znf879Q8BI99 563 aa8.8□□□□□ -1
Sf3b1-201ENSMUST00000027127 Rps6kc1Q8BLK9 1056 aa8.8□□□□□ -1
Sf3b1-201ENSMUST00000027127 Snx9Q91VH2 595 aa8.8□□□□□ -1
Sf3b1-201ENSMUST00000027127 Dusp21Q9D9D8 189 aa8.8□□□□□ -1
Sf3b1-201ENSMUST00000027127 Chmp2aQ9DB34 222 aa8.8□□□□□ -1
Sf3b1-201ENSMUST00000027127 Tmem174Q9DCX7 243 aa8.8□□□□□ -1
Sf3b1-201ENSMUST00000027127 PrccQ9EQC8 491 aaKnown RBP8.8□□□□□ -1
Sf3b1-201ENSMUST00000027127 Ror2Q9Z138 944 aa8.8□□□□□ -1
Sf3b1-201ENSMUST00000027127 Orc1Q9Z1N2 840 aaKnown RBP8.8□□□□□ -1
Sf3b1-201ENSMUST00000027127 TpteG5E8H5 664 aa8.79□□□□□ -1
Sf3b1-201ENSMUST00000027127 Exoc7O35250 697 aa8.79□□□□□ -1
Sf3b1-201ENSMUST00000027127 Fen1P39749 378 aa8.79□□□□□ -1
Sf3b1-201ENSMUST00000027127 Thumpd3P97770 505 aa8.79□□□□□ -1
Sf3b1-201ENSMUST00000027127 Ccdc160Q3UYG1 323 aa8.79□□□□□ -1
Sf3b1-201ENSMUST00000027127 Pik3r5Q5SW28 871 aa8.79□□□□□ -1
Sf3b1-201ENSMUST00000027127 Kctd15Q8K0E1 283 aa8.79□□□□□ -1
Sf3b1-201ENSMUST00000027127 Spag16Q8K450 639 aa8.79□□□□□ -1
Sf3b1-201ENSMUST00000027127 Msi2Q920Q6 346 aaKnown RBP8.79□□□□□ -1
Sf3b1-201ENSMUST00000027127 Rps6ka2Q9WUT3 733 aa8.79□□□□□ -1
Sf3b1-201ENSMUST00000027127 Rpl9-ps1S4R1R7 191 aa8.79□□□□□ -1
Sf3b1-201ENSMUST00000027127 Rhox3fA2ANE1 215 aa8.79□□□□□ -1
Sf3b1-201ENSMUST00000027127 D3Z070 196 aa8.79□□□□□ -1
Sf3b1-201ENSMUST00000027127 Mup13L7N222 235 aa8.79□□□□□ -1
Sf3b1-201ENSMUST00000027127 Acot1O55137 419 aa8.79□□□□□ -1
Sf3b1-201ENSMUST00000027127 CcnoP0C242 352 aa8.79□□□□□ -1
Sf3b1-201ENSMUST00000027127 Elk3P41971 409 aa8.79□□□□□ -1
Sf3b1-201ENSMUST00000027127 Hnrnph2P70333 449 aaKnown RBP8.79□□□□□ -1
Sf3b1-201ENSMUST00000027127 Grid1Q61627 1009 aa8.79□□□□□ -1
Sf3b1-201ENSMUST00000027127 Rcn2Q8BP92 320 aa8.79□□□□□ -1
Sf3b1-201ENSMUST00000027127 Phactr3Q8BYK5 558 aa8.79□□□□□ -1
Sf3b1-201ENSMUST00000027127 Thoc1Q8R3N6 657 aaKnown RBP8.79□□□□□ -1
Sf3b1-201ENSMUST00000027127 Prkag2Q91WG5 566 aa8.79□□□□□ -1
Sf3b1-201ENSMUST00000027127 Zfp623Q9CY99 499 aa8.79□□□□□ -1
Sf3b1-201ENSMUST00000027127 Dnajc18Q9CZJ9 357 aa8.79□□□□□ -1
Sf3b1-201ENSMUST00000027127 Doc2gQ9ESN1 387 aa8.79□□□□□ -1
Retrieved 100 of 22,080 RNA–protein pairs in 23.9 ms