RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Plcb4Q91UZ1 1175 aa16.85■□□□□ 0.29
Trim28-201ENSMUST00000005705 TfQ921I1 697 aa16.85■□□□□ 0.29
Trim28-201ENSMUST00000005705 Gdap2Q9DBL2 498 aa16.85■□□□□ 0.29
Trim28-201ENSMUST00000005705 PrkchP23298 683 aa16.85■□□□□ 0.29
Trim28-201ENSMUST00000005705 PdgfraP26618 1089 aa16.85■□□□□ 0.29
Trim28-201ENSMUST00000005705 Rnf220Q6PDX6 566 aa16.85■□□□□ 0.29
Trim28-201ENSMUST00000005705 Vmn2r43Q80Z08 845 aa16.85■□□□□ 0.29
Trim28-201ENSMUST00000005705 Mrpl58Q8R035 206 aa16.85■□□□□ 0.29
Trim28-201ENSMUST00000005705 Nek8Q91ZR4 698 aa16.85■□□□□ 0.29
Trim28-201ENSMUST00000005705 Ubxn11Q9D572 484 aa16.85■□□□□ 0.29
Trim28-201ENSMUST00000005705 DpysQ9EQF5 519 aa16.85■□□□□ 0.29
Trim28-201ENSMUST00000005705 PcntP48725 2898 aa16.85■□□□□ 0.29
Trim28-201ENSMUST00000005705 Olfr391-psA0A0U1RNJ4 312 aa16.85■□□□□ 0.29
Trim28-201ENSMUST00000005705 Dpy19l4A2AJQ3 722 aa16.85■□□□□ 0.29
Trim28-201ENSMUST00000005705 Olfr456B2RT27 312 aa16.85■□□□□ 0.29
Trim28-201ENSMUST00000005705 IapP03975 557 aa16.85■□□□□ 0.29
Trim28-201ENSMUST00000005705 Fgl2P12804 432 aa16.85■□□□□ 0.29
Trim28-201ENSMUST00000005705 S100bP50114 92 aa16.85■□□□□ 0.29
Trim28-201ENSMUST00000005705 Gpsm3Q3U1Z5 159 aa16.85■□□□□ 0.29
Trim28-201ENSMUST00000005705 Pak4Q8BTW9 593 aa16.85■□□□□ 0.29
Trim28-201ENSMUST00000005705 Olfr458Q8VF80 313 aa16.85■□□□□ 0.29
Trim28-201ENSMUST00000005705 Olfr457Q8VGP5 313 aa16.85■□□□□ 0.29
Trim28-201ENSMUST00000005705 Atp6v1b1Q91YH6 513 aa16.85■□□□□ 0.29
Trim28-201ENSMUST00000005705 Dok4Q99KE3 325 aa16.85■□□□□ 0.29
Trim28-201ENSMUST00000005705 Rrp15Q9CYX7 281 aaKnown RBP16.85■□□□□ 0.29
Trim28-201ENSMUST00000005705 Rassf7Q9DD19 359 aa16.85■□□□□ 0.29
Trim28-201ENSMUST00000005705 Zswim8Q3UHH1 1832 aaKnown RBP16.85■□□□□ 0.29
Trim28-201ENSMUST00000005705 Mcpt4P21812 246 aa16.84■□□□□ 0.29
Trim28-201ENSMUST00000005705 SftpdP50404 374 aa16.84■□□□□ 0.29
Trim28-201ENSMUST00000005705 Gata5P97489 404 aa16.84■□□□□ 0.29
Trim28-201ENSMUST00000005705 Pdlim7Q3TJD7 457 aa16.84■□□□□ 0.29
Trim28-201ENSMUST00000005705 OtulinQ3UCV8 352 aa16.84■□□□□ 0.29
Trim28-201ENSMUST00000005705 Ppp4r3cQ3V0Y1 813 aa16.84■□□□□ 0.29
Trim28-201ENSMUST00000005705 Sp140Q6NSQ5 534 aa16.84■□□□□ 0.29
Trim28-201ENSMUST00000005705 Mpp4Q6P7F1 635 aa16.84■□□□□ 0.29
Trim28-201ENSMUST00000005705 Znf579Q80VM4 562 aa16.84■□□□□ 0.29
Trim28-201ENSMUST00000005705 NfascQ810U3 1240 aa16.84■□□□□ 0.29
Trim28-201ENSMUST00000005705 Polr2bQ8CFI7 1174 aaKnown RBP16.84■□□□□ 0.29
Trim28-201ENSMUST00000005705 PdgfdQ925I7 370 aa16.84■□□□□ 0.29
Trim28-201ENSMUST00000005705 Mageb4A2A9R3 556 aa16.84■□□□□ 0.29
Trim28-201ENSMUST00000005705 Nedd9O35177 833 aa16.84■□□□□ 0.29
Trim28-201ENSMUST00000005705 Lypla1P97823 230 aa16.84■□□□□ 0.29
Trim28-201ENSMUST00000005705 Glt6d1Q2NKH9 311 aa16.84■□□□□ 0.29
Trim28-201ENSMUST00000005705 B3gntl1Q3U129 357 aa16.84■□□□□ 0.29
Trim28-201ENSMUST00000005705 Olfm4Q3UZZ4 505 aa16.84■□□□□ 0.29
Trim28-201ENSMUST00000005705 Eif2dQ61211 570 aaKnown RBP16.84■□□□□ 0.29
Trim28-201ENSMUST00000005705 Tmcc1Q69ZZ6 649 aa16.84■□□□□ 0.29
Trim28-201ENSMUST00000005705 Acvr1cQ8K348 493 aa16.84■□□□□ 0.29
Trim28-201ENSMUST00000005705 Epn3Q91W69 636 aa16.84■□□□□ 0.29
Trim28-201ENSMUST00000005705 BrdtQ91Y44 956 aa16.84■□□□□ 0.29
Trim28-201ENSMUST00000005705 Pdk3Q922H2 415 aaKnown RBP16.84■□□□□ 0.29
Trim28-201ENSMUST00000005705 Taf11Q99JX1 211 aa16.84■□□□□ 0.29
Trim28-201ENSMUST00000005705 Slc29a1Q9JIM1 460 aa16.84■□□□□ 0.29
Trim28-201ENSMUST00000005705 PorcnQ9JJJ7 461 aa16.84■□□□□ 0.29
Trim28-201ENSMUST00000005705 Capn7Q9R1S8 813 aa16.84■□□□□ 0.29
Trim28-201ENSMUST00000005705 Bnip3lQ9Z2F7 218 aa16.84■□□□□ 0.29
Trim28-201ENSMUST00000005705 Spata31d1aE9QA35 1336 aa16.84■□□□□ 0.29
Trim28-201ENSMUST00000005705 Plekhg4A0A1L1SU27 1217 aa16.83■□□□□ 0.29
Trim28-201ENSMUST00000005705 Vmn2r104E9Q2J5 860 aa16.83■□□□□ 0.29
Trim28-201ENSMUST00000005705 Grpel2O88396 224 aa16.83■□□□□ 0.29
Trim28-201ENSMUST00000005705 L1camP11627 1260 aa16.83■□□□□ 0.29
Trim28-201ENSMUST00000005705 Bcar1Q61140 874 aa16.83■□□□□ 0.29
Trim28-201ENSMUST00000005705 Fam107aQ78TU8 144 aa16.83■□□□□ 0.29
Trim28-201ENSMUST00000005705 Q8CIL4 281 aa16.83■□□□□ 0.29
Trim28-201ENSMUST00000005705 Kctd15Q8K0E1 283 aa16.83■□□□□ 0.29
Trim28-201ENSMUST00000005705 Setd3Q91WC0 594 aa16.83■□□□□ 0.29
Trim28-201ENSMUST00000005705 Jph2Q9ET78 696 aa16.83■□□□□ 0.29
Trim28-201ENSMUST00000005705 Fbxl18E9PYR1 771 aa16.83■□□□□ 0.28
Trim28-201ENSMUST00000005705 Birc5O70201 140 aa16.83■□□□□ 0.28
Trim28-201ENSMUST00000005705 Ptp4a2O70274 167 aa16.83■□□□□ 0.28
Trim28-201ENSMUST00000005705 Ppargc1aO70343 797 aa16.83■□□□□ 0.28
Trim28-201ENSMUST00000005705 M6prP24668 278 aa16.83■□□□□ 0.28
Trim28-201ENSMUST00000005705 Taf1bP97358 586 aa16.83■□□□□ 0.28
Trim28-201ENSMUST00000005705 Sox8Q04886 464 aa16.83■□□□□ 0.28
Trim28-201ENSMUST00000005705 Snx25Q3ZT31 840 aa16.83■□□□□ 0.28
Trim28-201ENSMUST00000005705 DgkqQ6P5E8 934 aa16.83■□□□□ 0.28
Trim28-201ENSMUST00000005705 Atp6v0d2Q80SY3 350 aa16.83■□□□□ 0.28
Trim28-201ENSMUST00000005705 Glis2Q8VDL9 521 aa16.83■□□□□ 0.28
Trim28-201ENSMUST00000005705 Ascc2Q91WR3 749 aa16.83■□□□□ 0.28
Trim28-201ENSMUST00000005705 Ddx56Q9D0R4 546 aaKnown RBP16.83■□□□□ 0.28
Trim28-201ENSMUST00000005705 Chrac1Q9JKP8 129 aa16.83■□□□□ 0.28
Trim28-201ENSMUST00000005705 Mpp5Q9JLB2 675 aa16.83■□□□□ 0.28
Trim28-201ENSMUST00000005705 B3galt4Q9Z0F0 371 aa16.83■□□□□ 0.28
Trim28-201ENSMUST00000005705 Sbf2E9PXF8 1872 aa16.83■□□□□ 0.28
Trim28-201ENSMUST00000005705 Apold1E9Q0X2 246 aa16.83■□□□□ 0.28
Trim28-201ENSMUST00000005705 PtpraP18052 829 aa16.83■□□□□ 0.28
Trim28-201ENSMUST00000005705 NfiaQ02780 532 aa16.83■□□□□ 0.28
Trim28-201ENSMUST00000005705 Arhgap45Q3TBD2 1116 aa16.83■□□□□ 0.28
Trim28-201ENSMUST00000005705 Arid5aQ3U108 590 aa16.83■□□□□ 0.28
Trim28-201ENSMUST00000005705 Sv2cQ69ZS6 727 aa16.83■□□□□ 0.28
Trim28-201ENSMUST00000005705 MregQ6NVG5 214 aa16.83■□□□□ 0.28
Trim28-201ENSMUST00000005705 Zfyve28Q6ZPK7 905 aa16.83■□□□□ 0.28
Trim28-201ENSMUST00000005705 Lyve1Q8BHC0 318 aa16.83■□□□□ 0.28
Trim28-201ENSMUST00000005705 Cpsf7Q8BTV2 471 aaKnown RBP16.83■□□□□ 0.28
Trim28-201ENSMUST00000005705 Rhpn2Q8BWR8 686 aa16.83■□□□□ 0.28
Trim28-201ENSMUST00000005705 Lin7aQ8JZS0 233 aa16.83■□□□□ 0.28
Trim28-201ENSMUST00000005705 Stx18Q8VDS8 334 aa16.83■□□□□ 0.28
Trim28-201ENSMUST00000005705 Nrbp2Q91V36 499 aa16.83■□□□□ 0.28
Trim28-201ENSMUST00000005705 Krt5Q922U2 580 aa16.83■□□□□ 0.28
Trim28-201ENSMUST00000005705 AenQ9CZI9 336 aaKnown RBP16.83■□□□□ 0.28
Retrieved 100 of 22,080 RNA–protein pairs in 47.2 ms