RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 Ndufaf7Q9CWG8 436 aa9.46□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Dlgap1Q9D415 992 aa9.46□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Frmd7A2AD83 703 aa9.46□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Ugt1a6bK9J7B2 531 aa9.46□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 H2-Eb1P04230 264 aa9.46□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 PolP11369 1281 aa9.46□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 ItgalP24063 1163 aa9.46□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Pax3P24610 479 aa9.46□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Cdk16Q04735 496 aa9.46□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 RubcnlQ3TD16 648 aa9.46□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Scrn3Q3TMH2 418 aa9.46□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Znf746Q3U133 652 aa9.46□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Olfml2bQ3V1G4 746 aa9.46□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Sfmbt2Q5DTW2 938 aa9.46□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Ugt1a6Q64435 531 aa9.46□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Frmd5Q6P5H6 517 aa9.46□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Ugt1a7cQ6ZQM8 531 aa9.46□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 C2cd2lQ80X80 706 aa9.46□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Q8C1R3 189 aa9.46□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Gsdmc3Q8CB12 480 aa9.46□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Trpv3Q8K424 791 aa9.46□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Dusp19Q8K4T5 220 aa9.46□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Ndufs1Q91VD9 727 aaKnown RBP9.46□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Nkd1Q99MH6 471 aa9.46□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Sesn3Q9CYP7 492 aa9.46□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Sept12Q9D451 317 aa9.46□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Tex44Q9DA60 530 aa9.46□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Coro1cQ9WUM4 474 aa9.46□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Atp8b5A3FIN4 1183 aa9.45□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Pramef20B1ARV6 477 aa9.45□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Pnldc1B2RXZ1 531 aa9.45□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Gm17093F6XGJ4 214 aa9.45□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Birc5O70201 140 aa9.45□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Psmd7P26516 321 aa9.45□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Itga7Q61738 1179 aa9.45□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Nsun6Q7TS68 476 aa9.45□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 3830417A13RikQ8BQJ2 303 aa9.45□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 NkrfQ8BY02 690 aaKnown RBP9.45□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Mtrf1Q8K126 446 aa9.45□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Gtf2h3Q8VD76 309 aa9.45□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Rsl24d1Q99L28 163 aa9.45□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Bcs1lQ9CZP5 418 aa9.45□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Rfc5Q9D0F6 339 aa9.45□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Mrpl19Q9D338 292 aaKnown RBP9.45□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Ak1Q9R0Y5 194 aa9.45□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Ddx39bQ9Z1N5 428 aaKnown RBP9.45□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Zmym2Q9CU65 1376 aa9.45□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Magea4F2Z493 315 aa9.45□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Tnfrsf11bO08712 401 aa9.45□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Got1P05201 413 aa9.45□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Phka1P18826 1241 aa9.45□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Nol4P60954 483 aa9.45□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Lpar1P61793 364 aa9.45□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Serpina6Q06770 397 aa9.45□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Entpd7Q3TCT4 606 aa9.45□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Fam83fQ3UKU4 495 aa9.45□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 HadhQ61425 314 aa9.45□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Cyp3a11Q64459 504 aa9.45□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Atg9aQ68FE2 551 aa9.45□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Cep78Q6IRU7 790 aa9.45□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Dlgap3Q6PFD5 977 aa9.45□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Pi4kbQ8BKC8 816 aa9.45□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Pkn2Q8BWW9 983 aa9.45□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 TbcelQ8C5W3 424 aa9.45□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Eva1bQ8K2Y3 164 aa9.45□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Epm2aip1Q8VEH5 606 aa9.45□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Olfr1467Q8VFW1 308 aa9.45□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 1700129C05RikQ9CQ77 218 aa9.45□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Trmt11Q9CWH5 460 aa9.45□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 MtrexQ9CZU3 1040 aaKnown RBP9.45□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Tssc4Q9JHE7 317 aa9.45□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Olfr271-ps1A0A1L1SQH2 283 aa9.45□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Ankrd63A2ARS0 390 aa9.45□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Mocs3A2BDX3 460 aaKnown RBP9.45□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Zfp472B0V2W5 534 aa9.45□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Gucy1a2F8VQK3 730 aa9.45□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Rgs9O54828 675 aa9.45□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Nmt2O70311 529 aa9.45□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 BC051142Q3V0M8 400 aa9.45□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 BC030870Q3V2G4 71 aa9.45□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Llgl1Q80Y17 1036 aa9.45□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Znf451Q8C0P7 1056 aa9.45□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Mettl3Q8C3P7 580 aa9.45□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Snrnp27Q8K194 155 aa9.45□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Taf6lQ8R2K4 616 aa9.45□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Socs4Q91ZA6 436 aa9.45□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Msh5Q9QUM7 833 aa9.45□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Sbno2Q7TNB8 1349 aa9.45□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Znf711A2ANX9 761 aa9.45□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Rsrc2A2RTL5 376 aaKnown RBP9.45□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Mms22lB1AUR6 1238 aa9.45□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 InvsO89019 1062 aa9.45□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Nfkb1P25799 971 aa9.45□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Ccnd2P30280 289 aa9.45□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Akt1P31750 480 aa9.45□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Slc1a2P43006 572 aa9.45□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 InaP46660 501 aa9.45□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Sat1P48026 171 aa9.45□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Snap25P60879 206 aa9.45□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Gdf10P97737 476 aa9.45□□□□□ -0.9
Retrieved 100 of 22,080 RNA–protein pairs in 18.6 ms