RNA–Protein interactions for RNA: YPR056W

TFB4, Transcript of Subunit of TFIIH complex, yeastyeast

Gene TFB4, Length 1,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TFB4YPR056W IRC21Q04772 201 aa3.78□□□□□ -1.8
TFB4YPR056W YIL134C-AQ45U18 67 aa3.78□□□□□ -1.8
TFB4YPR056W CDC39P25655 2108 aaKnown RBP3.77□□□□□ -1.81
TFB4YPR056W CCW14O13547 238 aa3.77□□□□□ -1.81
TFB4YPR056W MRX7P53869 86 aa3.77□□□□□ -1.81
TFB4YPR056W YOR105WQ08504 108 aa3.77□□□□□ -1.81
TFB4YPR056W YOR314WQ12506 109 aa3.77□□□□□ -1.81
TFB4YPR056W YSF3P0C074 85 aaPredicted RBP3.76□□□□□ -1.81
TFB4YPR056W UBR2Q07963 1872 aa3.75□□□□□ -1.81
TFB4YPR056W PAU6P0CE90 120 aa3.75□□□□□ -1.81
TFB4YPR056W PAU18P0CE91 120 aa3.75□□□□□ -1.81
TFB4YPR056W VMA9Q3E7B6 73 aa3.75□□□□□ -1.81
TFB4YPR056W FKS3Q04952 1785 aa3.75□□□□□ -1.81
TFB4YPR056W SNQ2P32568 1501 aaKnown RBP3.75□□□□□ -1.81
TFB4YPR056W YNR034W-AQ3E841 98 aa3.74□□□□□ -1.81
TFB4YPR056W YER188C-AP0C0V2 99 aa3.73□□□□□ -1.81
TFB4YPR056W COX12Q01519 83 aa3.73□□□□□ -1.81
TFB4YPR056W YKL065W-AQ2V2P2 73 aa3.73□□□□□ -1.81
TFB4YPR056W NTE1Q04958 1679 aa3.73□□□□□ -1.81
TFB4YPR056W PDR5P33302 1511 aaKnown RBP3.73□□□□□ -1.81
TFB4YPR056W PDX3P38075 228 aaKnown RBP3.72□□□□□ -1.81
TFB4YPR056W CCW12Q12127 133 aa3.72□□□□□ -1.81
TFB4YPR056W RPO21P04050 1733 aaKnown RBP3.72□□□□□ -1.81
TFB4YPR056W YAL065CO13511 128 aa3.71□□□□□ -1.82
TFB4YPR056W MPC2P38857 129 aa3.71□□□□□ -1.82
TFB4YPR056W YDR210WQ03482 75 aa3.71□□□□□ -1.82
TFB4YPR056W YGL041C-BQ3E750 60 aa3.71□□□□□ -1.82
TFB4YPR056W PMD1P32634 1753 aa3.71□□□□□ -1.82
TFB4YPR056W YPR096CO13587 100 aa3.7□□□□□ -1.82
TFB4YPR056W YCL042WP25572 119 aa3.7□□□□□ -1.82
TFB4YPR056W TIM12P32830 109 aa3.7□□□□□ -1.82
TFB4YPR056W YBR219CP38317 127 aa3.7□□□□□ -1.82
TFB4YPR056W LCL2Q08045 131 aa3.7□□□□□ -1.82
TFB4YPR056W COA3Q3E7B2 85 aa3.7□□□□□ -1.82
TFB4YPR056W MMS1Q06211 1407 aa3.7□□□□□ -1.82
TFB4YPR056W YGR121W-AQ3E816 71 aa3.69□□□□□ -1.82
TFB4YPR056W CYR1P08678 2026 aaKnown RBP3.68□□□□□ -1.82
TFB4YPR056W SPT6P23615 1451 aaKnown RBP3.68□□□□□ -1.82
TFB4YPR056W MRPS12P53732 153 aa3.68□□□□□ -1.82
TFB4YPR056W BSC4P53841 131 aa3.68□□□□□ -1.82
TFB4YPR056W YIL102C-AQ2V2P5 75 aa3.67□□□□□ -1.82
TFB4YPR056W MRPL31P14063 131 aaPredicted RBP3.66□□□□□ -1.82
TFB4YPR056W QCR9P22289 66 aa3.66□□□□□ -1.82
TFB4YPR056W AIM19P40502 157 aa3.66□□□□□ -1.82
TFB4YPR056W YLR162WQ06235 118 aa3.66□□□□□ -1.82
TFB4YPR056W COX19Q3E731 98 aa3.65□□□□□ -1.83
TFB4YPR056W YNL146C-AQ3E7Z1 64 aa3.65□□□□□ -1.83
TFB4YPR056W VTH1P40438 1549 aa3.65□□□□□ -1.83
TFB4YPR056W VTH2P40890 1549 aa3.65□□□□□ -1.83
TFB4YPR056W PAU8P0CE92 120 aa3.64□□□□□ -1.83
TFB4YPR056W PAU11P0CE93 120 aa3.64□□□□□ -1.83
TFB4YPR056W PAU13P38725 120 aa3.64□□□□□ -1.83
TFB4YPR056W PAU4P53427 120 aa3.64□□□□□ -1.83
TFB4YPR056W PAU10Q03050 120 aa3.64□□□□□ -1.83
TFB4YPR056W YDR010CQ12426 110 aa3.64□□□□□ -1.83
TFB4YPR056W PAU9Q3E770 120 aa3.64□□□□□ -1.83
TFB4YPR056W YGR240C-AQ3E786 66 aa3.64□□□□□ -1.83
TFB4YPR056W SPO14P36126 1683 aa3.64□□□□□ -1.83
TFB4YPR056W IRC20Q06554 1556 aa3.63□□□□□ -1.83
TFB4YPR056W PAU1P0CE88 120 aa3.63□□□□□ -1.83
TFB4YPR056W PAU14P0CE89 120 aa3.63□□□□□ -1.83
TFB4YPR056W YHR173CP38864 112 aa3.63□□□□□ -1.83
TFB4YPR056W YRF1-1P0CX20 1796 aa3.63□□□□□ -1.83
TFB4YPR056W YRF1-5P0CX21 1796 aa3.63□□□□□ -1.83
TFB4YPR056W YRF1-8P0CX22 1796 aa3.63□□□□□ -1.83
TFB4YPR056W BCK1Q01389 1478 aa3.62□□□□□ -1.83
TFB4YPR056W TY4B-HP0C2J7 1802 aa3.61□□□□□ -1.83
TFB4YPR056W CDC25P04821 1589 aa3.61□□□□□ -1.83
TFB4YPR056W RPS11AP0CX47 156 aaKnown RBP3.61□□□□□ -1.83
TFB4YPR056W RPS11BP0CX48 156 aaKnown RBP3.61□□□□□ -1.83
TFB4YPR056W PRM7Q12459 698 aa3.6□□□□□ -1.83
TFB4YPR056W YIL156W-BQ2V2P4 73 aa3.6□□□□□ -1.83
TFB4YPR056W YHR086W-AQ3E746 53 aa3.6□□□□□ -1.83
TFB4YPR056W APC1P53886 1748 aa3.6□□□□□ -1.83
TFB4YPR056W TY4B-JP47024 1803 aa3.6□□□□□ -1.83
TFB4YPR056W STT4P37297 1900 aa3.6□□□□□ -1.83
TFB4YPR056W TY3B-GQ99315 1547 aa3.6□□□□□ -1.83
TFB4YPR056W IML1P47170 1584 aa3.59□□□□□ -1.83
TFB4YPR056W SPI1P40092 148 aa3.59□□□□□ -1.83
TFB4YPR056W YDL012CQ12489 107 aa3.59□□□□□ -1.83
TFB4YPR056W YGR035W-AQ45U48 73 aa3.59□□□□□ -1.83
TFB4YPR056W NOP10Q6Q547 58 aaPredicted RBP3.59□□□□□ -1.83
TFB4YPR056W FPR2P32472 135 aa3.57□□□□□ -1.84
TFB4YPR056W RIM15P43565 1770 aa3.57□□□□□ -1.84
TFB4YPR056W ULS1Q08562 1619 aa3.57□□□□□ -1.84
TFB4YPR056W YJL009WP47078 108 aa3.56□□□□□ -1.84
TFB4YPR056W PAU20Q08322 120 aa3.55□□□□□ -1.84
TFB4YPR056W SLH1P53327 1967 aaKnown RBP3.54□□□□□ -1.84
TFB4YPR056W ERI1P62651 68 aaKnown RBP3.54□□□□□ -1.84
TFB4YPR056W UTP10P42945 1769 aaKnown RBP3.53□□□□□ -1.84
TFB4YPR056W YSY6P38374 65 aa3.53□□□□□ -1.84
TFB4YPR056W YDR246W-AQ3E763 66 aa3.53□□□□□ -1.84
TFB4YPR056W MOT1P32333 1867 aa3.53□□□□□ -1.84
TFB4YPR056W PEP1P32319 1579 aa3.52□□□□□ -1.85
TFB4YPR056W YLR255CO13574 117 aa3.52□□□□□ -1.85
TFB4YPR056W YNL122CP53921 115 aaPredicted RBP3.52□□□□□ -1.85
TFB4YPR056W YBT1P32386 1661 aa3.52□□□□□ -1.85
TFB4YPR056W URB1P34241 1764 aaKnown RBP3.5□□□□□ -1.85
TFB4YPR056W FAB1P34756 2278 aa3.5□□□□□ -1.85
TFB4YPR056W BRR2P32639 2163 aaKnown RBP3.48□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 86.9 ms