RNA–Protein interactions for RNA: YPR025C

CCL1, Transcript of Cyclin associated with protein kinase Kin28p, yeastyeast

Gene CCL1, Length 1,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCL1YPR025C YCL001W-BQ96VH2 84 aa0.82□□□□□ -2.28
CCL1YPR025C RPS11AP0CX47 156 aaKnown RBP0.81□□□□□ -2.28
CCL1YPR025C RPS11BP0CX48 156 aaKnown RBP0.81□□□□□ -2.28
CCL1YPR025C YBR292CP38357 123 aa0.81□□□□□ -2.28
CCL1YPR025C RSM18P40033 138 aa0.81□□□□□ -2.28
CCL1YPR025C YDR042CQ03205 200 aa0.81□□□□□ -2.28
CCL1YPR025C MOT1P32333 1867 aa0.81□□□□□ -2.28
CCL1YPR025C PAU1P0CE88 120 aa0.8□□□□□ -2.28
CCL1YPR025C PAU14P0CE89 120 aa0.8□□□□□ -2.28
CCL1YPR025C PAU8P0CE92 120 aa0.8□□□□□ -2.28
CCL1YPR025C PAU11P0CE93 120 aa0.8□□□□□ -2.28
CCL1YPR025C RPA12P32529 125 aaKnown RBP0.8□□□□□ -2.28
CCL1YPR025C PAU13P38725 120 aa0.8□□□□□ -2.28
CCL1YPR025C AIM19P40502 157 aa0.8□□□□□ -2.28
CCL1YPR025C PAU10Q03050 120 aa0.8□□□□□ -2.28
CCL1YPR025C PAU9Q3E770 120 aa0.8□□□□□ -2.28
CCL1YPR025C SUS1Q6WNK7 96 aa0.8□□□□□ -2.28
CCL1YPR025C YMR082CQ04276 118 aa0.79□□□□□ -2.28
CCL1YPR025C UTP10P42945 1769 aaKnown RBP0.78□□□□□ -2.28
CCL1YPR025C SNU13P39990 126 aaKnown RBP0.78□□□□□ -2.28
CCL1YPR025C PAU4P53427 120 aa0.78□□□□□ -2.28
CCL1YPR025C YOL164W-AQ3E7A5 60 aa0.78□□□□□ -2.28
CCL1YPR025C YGL194C-AQ2V2P6 80 aa0.77□□□□□ -2.29
CCL1YPR025C SKI3P17883 1432 aaKnown RBP0.76□□□□□ -2.29
CCL1YPR025C STT4P37297 1900 aa0.76□□□□□ -2.29
CCL1YPR025C TY1B-DR5P0C2I2 1755 aa0.75□□□□□ -2.29
CCL1YPR025C TY1B-PR1P0C2I9 1755 aaKnown RBP0.75□□□□□ -2.29
CCL1YPR025C TY1B-JR1P47098 1755 aa0.75□□□□□ -2.29
CCL1YPR025C TY1B-ML2Q03434 1755 aaKnown RBP0.75□□□□□ -2.29
CCL1YPR025C TY1B-ER1Q03612 1755 aa0.75□□□□□ -2.29
CCL1YPR025C TY1B-ER2Q03619 1755 aa0.75□□□□□ -2.29
CCL1YPR025C TY1B-DR1Q03855 1755 aa0.75□□□□□ -2.29
CCL1YPR025C TY1B-ML1Q04711 1755 aaKnown RBP0.75□□□□□ -2.29
CCL1YPR025C TY1B-LR1Q12088 1755 aaKnown RBP0.75□□□□□ -2.29
CCL1YPR025C TY1B-GR2Q12269 1755 aa0.75□□□□□ -2.29
CCL1YPR025C TY1B-OLQ12273 1755 aa0.75□□□□□ -2.29
CCL1YPR025C TY1B-DR3Q99231 1755 aa0.75□□□□□ -2.29
CCL1YPR025C YSP2Q06681 1438 aa0.75□□□□□ -2.29
CCL1YPR025C ECM12O13529 151 aa0.75□□□□□ -2.29
CCL1YPR025C NHP2P32495 156 aaPredicted RBP0.75□□□□□ -2.29
CCL1YPR025C MHF2Q3E829 80 aa0.75□□□□□ -2.29
CCL1YPR025C MLP1Q02455 1875 aaKnown RBP0.75□□□□□ -2.29
CCL1YPR025C LTE1P07866 1435 aa0.73□□□□□ -2.29
CCL1YPR025C SCP1Q08873 200 aa0.73□□□□□ -2.29
CCL1YPR025C BSC4P53841 131 aa0.72□□□□□ -2.29
CCL1YPR025C YNL190WP53872 204 aa0.72□□□□□ -2.29
CCL1YPR025C YNL042W-BQ3E7Z2 85 aa0.72□□□□□ -2.29
CCL1YPR025C Q0032Q9ZZX7 96 aa0.72□□□□□ -2.29
CCL1YPR025C RPC10P40422 70 aa0.71□□□□□ -2.3
CCL1YPR025C YMR175W-AQ3E766 64 aa0.71□□□□□ -2.3
CCL1YPR025C HKR1P41809 1802 aa0.71□□□□□ -2.3
CCL1YPR025C RPS29BP41058 56 aaKnown RBP0.69□□□□□ -2.3
CCL1YPR025C XRN1P22147 1528 aaKnown RBP0.69□□□□□ -2.3
CCL1YPR025C YBR201C-AQ2V2Q3 67 aa0.68□□□□□ -2.3
CCL1YPR025C COX7P10174 60 aa0.66□□□□□ -2.3
CCL1YPR025C YNL198CP40166 100 aa0.66□□□□□ -2.3
CCL1YPR025C YMR122W-AQ3E842 84 aa0.66□□□□□ -2.3
CCL1YPR025C ESP1Q03018 1630 aa0.66□□□□□ -2.3
CCL1YPR025C PMD1P32634 1753 aa0.65□□□□□ -2.3
CCL1YPR025C RPL38P49167 78 aaKnown RBP0.65□□□□□ -2.31
CCL1YPR025C PAU23Q07987 124 aa0.65□□□□□ -2.31
CCL1YPR025C PAU17Q12370 124 aa0.65□□□□□ -2.31
CCL1YPR025C FPR2P32472 135 aa0.64□□□□□ -2.31
CCL1YPR025C YAL065CO13511 128 aa0.63□□□□□ -2.31
CCL1YPR025C YJR107C-AP0CT86 78 aa0.63□□□□□ -2.31
CCL1YPR025C YHR214C-DP0CX93 97 aa0.63□□□□□ -2.31
CCL1YPR025C CWP2P43497 92 aa0.63□□□□□ -2.31
CCL1YPR025C POC4Q12245 148 aaPredicted RBP0.63□□□□□ -2.31
CCL1YPR025C YOR343CQ12484 108 aa0.63□□□□□ -2.31
CCL1YPR025C TY2B-CP25384 1770 aa0.62□□□□□ -2.31
CCL1YPR025C TY2B-DR1Q12472 1770 aa0.62□□□□□ -2.31
CCL1YPR025C TOM6P33448 61 aa0.61□□□□□ -2.31
CCL1YPR025C PDX3P38075 228 aaKnown RBP0.61□□□□□ -2.31
CCL1YPR025C YIL156W-BQ2V2P4 73 aa0.61□□□□□ -2.31
CCL1YPR025C NOP10Q6Q547 58 aaPredicted RBP0.61□□□□□ -2.31
CCL1YPR025C BPH1P25356 2167 aa0.61□□□□□ -2.31
CCL1YPR025C TAO3P40468 2376 aa0.61□□□□□ -2.31
CCL1YPR025C ATP18P81450 59 aa0.6□□□□□ -2.31
CCL1YPR025C TY1B-NL2Q99337 1749 aaKnown RBP0.6□□□□□ -2.31
CCL1YPR025C YCR085WP25650 117 aa0.59□□□□□ -2.31
CCL1YPR025C YPR145C-AQ2V2P0 78 aa0.59□□□□□ -2.31
CCL1YPR025C MMS22Q06164 1454 aa0.59□□□□□ -2.32
CCL1YPR025C SIN3P22579 1536 aa0.59□□□□□ -2.32
CCL1YPR025C YFR009W-AP0C5M9 85 aa0.58□□□□□ -2.32
CCL1YPR025C YBR016WP38216 128 aa0.58□□□□□ -2.32
CCL1YPR025C SDH6Q3E785 79 aa0.57□□□□□ -2.32
CCL1YPR025C APC1P53886 1748 aa0.57□□□□□ -2.32
CCL1YPR025C YOR105WQ08504 108 aa0.55□□□□□ -2.32
CCL1YPR025C YDR381C-AQ3E6R5 114 aa0.53□□□□□ -2.32
CCL1YPR025C YIL134C-AQ45U18 67 aa0.53□□□□□ -2.32
CCL1YPR025C TY2B-LR1P0C2J3 1770 aa0.52□□□□□ -2.33
CCL1YPR025C TY2B-FP0CX63 1770 aa0.52□□□□□ -2.33
CCL1YPR025C TY2B-GR2P0CX64 1770 aa0.52□□□□□ -2.33
CCL1YPR025C TY2B-DR2Q03494 1770 aa0.52□□□□□ -2.33
CCL1YPR025C TY2B-OR1Q12113 1770 aa0.52□□□□□ -2.33
CCL1YPR025C TY2B-BQ12491 1770 aa0.52□□□□□ -2.33
CCL1YPR025C TY2B-OR2Q12501 1770 aa0.52□□□□□ -2.33
CCL1YPR025C SGF11Q03067 99 aa0.52□□□□□ -2.33
CCL1YPR025C YOR314WQ12506 109 aa0.52□□□□□ -2.33
CCL1YPR025C YDL022C-AP0C5L6 82 aa0.51□□□□□ -2.33
Retrieved 100 of 5,963 RNA–protein pairs in 10.8 ms