RNA–Protein interactions for RNA: YPL177C

CUP9, Transcript of Homeodomain-containing transcriptional repressor, yeastyeast

Gene CUP9, Length 921 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUP9YPL177C YBL071CP38185 102 aa0.69□□□□□ -2.3
CUP9YPL177C BLM10P43583 2143 aa0.69□□□□□ -2.3
CUP9YPL177C SNA2P56508 79 aa0.69□□□□□ -2.3
CUP9YPL177C YOR343CQ12484 108 aa0.69□□□□□ -2.3
CUP9YPL177C YPR145C-AQ2V2P0 78 aa0.69□□□□□ -2.3
CUP9YPL177C YNR034W-AQ3E841 98 aa0.69□□□□□ -2.3
CUP9YPL177C SRB8P25648 1427 aa0.69□□□□□ -2.3
CUP9YPL177C NTE1Q04958 1679 aa0.69□□□□□ -2.3
CUP9YPL177C YAL065CO13511 128 aa0.68□□□□□ -2.3
CUP9YPL177C YHR214C-DP0CX93 97 aa0.68□□□□□ -2.3
CUP9YPL177C SNF2P22082 1703 aa0.68□□□□□ -2.3
CUP9YPL177C MRP17P28778 131 aa0.68□□□□□ -2.3
CUP9YPL177C MPC2P38857 129 aa0.68□□□□□ -2.3
CUP9YPL177C COX12Q01519 83 aa0.68□□□□□ -2.3
CUP9YPL177C YDR010CQ12426 110 aa0.68□□□□□ -2.3
CUP9YPL177C YDR381C-AQ3E6R5 114 aa0.68□□□□□ -2.3
CUP9YPL177C YBR072C-AQ3E794 53 aa0.68□□□□□ -2.3
CUP9YPL177C SIN3P22579 1536 aa0.68□□□□□ -2.3
CUP9YPL177C STT4P37297 1900 aa0.68□□□□□ -2.3
CUP9YPL177C PAU8P0CE92 120 aa0.67□□□□□ -2.3
CUP9YPL177C PAU11P0CE93 120 aa0.67□□□□□ -2.3
CUP9YPL177C PAU13P38725 120 aa0.67□□□□□ -2.3
CUP9YPL177C PAU4P53427 120 aa0.67□□□□□ -2.3
CUP9YPL177C PAU10Q03050 120 aa0.67□□□□□ -2.3
CUP9YPL177C COX19Q3E731 98 aa0.67□□□□□ -2.3
CUP9YPL177C PAU9Q3E770 120 aa0.67□□□□□ -2.3
CUP9YPL177C YGR121W-AQ3E816 71 aa0.67□□□□□ -2.3
CUP9YPL177C YRF1-1P0CX20 1796 aa0.67□□□□□ -2.3
CUP9YPL177C YRF1-5P0CX21 1796 aa0.67□□□□□ -2.3
CUP9YPL177C YRF1-8P0CX22 1796 aa0.67□□□□□ -2.3
CUP9YPL177C PRP8P33334 2413 aaKnown RBP0.66□□□□□ -2.3
CUP9YPL177C PDX3P38075 228 aaKnown RBP0.66□□□□□ -2.3
CUP9YPL177C SWM2P40342 146 aa0.66□□□□□ -2.3
CUP9YPL177C YOR314WQ12506 109 aa0.66□□□□□ -2.3
CUP9YPL177C YIL156W-BQ2V2P4 73 aa0.66□□□□□ -2.3
CUP9YPL177C ECM29P38737 1868 aa0.66□□□□□ -2.3
CUP9YPL177C MMS22Q06164 1454 aa0.66□□□□□ -2.3
CUP9YPL177C DOP1Q03921 1698 aa0.65□□□□□ -2.3
CUP9YPL177C TY1B-GR3Q12316 1755 aa0.65□□□□□ -2.3
CUP9YPL177C TY1B-ORQ92393 1755 aa0.65□□□□□ -2.3
CUP9YPL177C TCB3Q03640 1545 aaKnown RBP0.65□□□□□ -2.31
CUP9YPL177C YFR010W-AP0C5N0 62 aa0.65□□□□□ -2.31
CUP9YPL177C LSM2P38203 95 aaKnown RBP0.65□□□□□ -2.31
CUP9YPL177C AIM19P40502 157 aa0.65□□□□□ -2.31
CUP9YPL177C BSC4P53841 131 aa0.65□□□□□ -2.31
CUP9YPL177C YDR246W-AQ3E763 66 aa0.65□□□□□ -2.31
CUP9YPL177C YOL164W-AQ3E7A5 60 aa0.65□□□□□ -2.31
CUP9YPL177C NOP10Q6Q547 58 aaPredicted RBP0.65□□□□□ -2.31
CUP9YPL177C MLP1Q02455 1875 aaKnown RBP0.65□□□□□ -2.31
CUP9YPL177C PDR12Q02785 1511 aa0.64□□□□□ -2.31
CUP9YPL177C YDL022C-AP0C5L6 82 aa0.64□□□□□ -2.31
CUP9YPL177C PAU20Q08322 120 aa0.64□□□□□ -2.31
CUP9YPL177C YGR035W-AQ45U48 73 aa0.64□□□□□ -2.31
CUP9YPL177C TY1B-DR5P0C2I2 1755 aa0.63□□□□□ -2.31
CUP9YPL177C TY1B-DR6P0C2I3 1755 aa0.63□□□□□ -2.31
CUP9YPL177C TY1B-LR2P0C2I5 1755 aa0.63□□□□□ -2.31
CUP9YPL177C TY1B-LR3P0C2I6 1755 aaKnown RBP0.63□□□□□ -2.31
CUP9YPL177C TY1B-PR1P0C2I9 1755 aaKnown RBP0.63□□□□□ -2.31
CUP9YPL177C TY1B-PR3P0C2J1 1755 aaKnown RBP0.63□□□□□ -2.31
CUP9YPL177C TY1B-JR1P47098 1755 aa0.63□□□□□ -2.31
CUP9YPL177C TY1B-ML2Q03434 1755 aaKnown RBP0.63□□□□□ -2.31
CUP9YPL177C TY1B-ER1Q03612 1755 aa0.63□□□□□ -2.31
CUP9YPL177C TY1B-ML1Q04711 1755 aaKnown RBP0.63□□□□□ -2.31
CUP9YPL177C TY1B-GR2Q12269 1755 aa0.63□□□□□ -2.31
CUP9YPL177C TY1B-OLQ12273 1755 aa0.63□□□□□ -2.31
CUP9YPL177C TY1B-PLQ12414 1755 aaKnown RBP0.63□□□□□ -2.31
CUP9YPL177C UFD4P33202 1483 aa0.63□□□□□ -2.31
CUP9YPL177C YBR056W-AI2HB52 66 aa0.63□□□□□ -2.31
CUP9YPL177C PAI3P01094 68 aa0.63□□□□□ -2.31
CUP9YPL177C PAU1P0CE88 120 aa0.63□□□□□ -2.31
CUP9YPL177C PAU14P0CE89 120 aa0.63□□□□□ -2.31
CUP9YPL177C TIM12P32830 109 aa0.63□□□□□ -2.31
CUP9YPL177C YBR292CP38357 123 aa0.63□□□□□ -2.31
CUP9YPL177C YKL065W-AQ2V2P2 73 aa0.63□□□□□ -2.31
CUP9YPL177C MHF2Q3E829 80 aa0.63□□□□□ -2.31
CUP9YPL177C YMR122W-AQ3E842 84 aa0.63□□□□□ -2.31
CUP9YPL177C UTP10P42945 1769 aaKnown RBP0.62□□□□□ -2.31
CUP9YPL177C DNF3Q12674 1656 aa0.62□□□□□ -2.31
CUP9YPL177C YFL041W-AQ3E817 63 aa0.62□□□□□ -2.31
CUP9YPL177C PMD1P32634 1753 aa0.62□□□□□ -2.31
CUP9YPL177C SCC2Q04002 1493 aa0.61□□□□□ -2.31
CUP9YPL177C TY2B-CP25384 1770 aa0.61□□□□□ -2.31
CUP9YPL177C RIM15P43565 1770 aa0.61□□□□□ -2.31
CUP9YPL177C TY2B-DR1Q12472 1770 aa0.61□□□□□ -2.31
CUP9YPL177C YNL198CP40166 100 aa0.61□□□□□ -2.31
CUP9YPL177C PAU23Q07987 124 aa0.61□□□□□ -2.31
CUP9YPL177C YOL131WQ08270 108 aa0.61□□□□□ -2.31
CUP9YPL177C PAU17Q12370 124 aa0.61□□□□□ -2.31
CUP9YPL177C YNL042W-BQ3E7Z2 85 aa0.61□□□□□ -2.31
CUP9YPL177C DNF1P32660 1571 aa0.61□□□□□ -2.31
CUP9YPL177C VPS15P22219 1454 aa0.61□□□□□ -2.31
CUP9YPL177C FMP27Q06179 2628 aa0.6□□□□□ -2.31
CUP9YPL177C SPI1P40092 148 aa0.6□□□□□ -2.31
CUP9YPL177C ERI1P62651 68 aaKnown RBP0.6□□□□□ -2.31
CUP9YPL177C YOR105WQ08504 108 aa0.6□□□□□ -2.31
CUP9YPL177C MOT1P32333 1867 aa0.6□□□□□ -2.31
CUP9YPL177C TY1B-DR4Q07793 1604 aa0.6□□□□□ -2.31
CUP9YPL177C TY1B-BLQ12490 1755 aa0.6□□□□□ -2.31
CUP9YPL177C QCR9P22289 66 aa0.59□□□□□ -2.31
CUP9YPL177C SSS1P35179 80 aa0.59□□□□□ -2.31
Retrieved 100 of 5,963 RNA–protein pairs in 33.3 ms