RNA–Protein interactions for RNA: YPL085W

SEC16, Transcript of COPII vesicle coat protein required for ER transport vesicle budding, yeastyeast

Gene SEC16, Length 6,588 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC16YPL085W SHU1P38751 150 aa1.69□□□□□ -2.14
SEC16YPL085W YTH1Q06102 208 aaPredicted RBP1.69□□□□□ -2.14
SEC16YPL085W Q0297Q9ZZV8 51 aa1.69□□□□□ -2.14
SEC16YPL085W NRG1Q03125 231 aa1.69□□□□□ -2.14
SEC16YPL085W PRM7Q12459 698 aa1.69□□□□□ -2.14
SEC16YPL085W MRS3P10566 314 aa1.69□□□□□ -2.14
SEC16YPL085W AIM11P87275 137 aa1.69□□□□□ -2.14
SEC16YPL085W YOL085CQ99345 113 aa1.69□□□□□ -2.14
SEC16YPL085W YDR182W-AQ3E796 67 aa1.69□□□□□ -2.14
SEC16YPL085W YNL162W-AQ3E7A8 72 aa1.69□□□□□ -2.14
SEC16YPL085W AGA1P32323 725 aa1.68□□□□□ -2.14
SEC16YPL085W YKL065W-AQ2V2P2 73 aa1.68□□□□□ -2.14
SEC16YPL085W YDR034W-BQ6Q5X2 51 aa1.68□□□□□ -2.14
SEC16YPL085W YPR014CQ6B0W2 109 aa1.68□□□□□ -2.14
SEC16YPL085W YJR107C-AP0CT86 78 aa1.68□□□□□ -2.14
SEC16YPL085W YOL097W-AQ3E7Y9 61 aa1.68□□□□□ -2.14
SEC16YPL085W AQY2P0CD90 149 aa1.68□□□□□ -2.14
SEC16YPL085W YGL149WP53116 101 aa1.68□□□□□ -2.14
SEC16YPL085W YDR029WQ12111 104 aa1.68□□□□□ -2.14
SEC16YPL085W MVB12P42939 101 aa1.68□□□□□ -2.14
SEC16YPL085W RPL14AP36105 138 aaKnown RBP1.67□□□□□ -2.14
SEC16YPL085W YBR209WP38311 105 aa1.67□□□□□ -2.14
SEC16YPL085W RPL14BP38754 138 aaKnown RBP1.67□□□□□ -2.14
SEC16YPL085W USV1Q12132 391 aa1.67□□□□□ -2.14
SEC16YPL085W SPS100P13130 326 aa1.67□□□□□ -2.14
SEC16YPL085W LIP1Q03579 150 aa1.67□□□□□ -2.14
SEC16YPL085W YOL160WQ08321 113 aa1.67□□□□□ -2.14
SEC16YPL085W YEL008WP40001 126 aa1.67□□□□□ -2.14
SEC16YPL085W YGL034CP53186 121 aa1.67□□□□□ -2.14
SEC16YPL085W YOL118CQ08259 102 aa1.67□□□□□ -2.14
SEC16YPL085W RPL28P02406 149 aaKnown RBP1.67□□□□□ -2.14
SEC16YPL085W RPL18AP0CX49 186 aaKnown RBP1.67□□□□□ -2.14
SEC16YPL085W RPL18BP0CX50 186 aaKnown RBP1.67□□□□□ -2.14
SEC16YPL085W KRE9P39005 276 aa1.67□□□□□ -2.14
SEC16YPL085W OLI1P61829 76 aa1.67□□□□□ -2.14
SEC16YPL085W YIL014C-AQ02598 104 aa1.67□□□□□ -2.14
SEC16YPL085W HUB1Q6Q546 73 aa1.67□□□□□ -2.14
SEC16YPL085W HHF1P02309 103 aaKnown RBP1.67□□□□□ -2.14
SEC16YPL085W RPL39P04650 51 aa1.67□□□□□ -2.14
SEC16YPL085W YBR121C-AP0C5L4 52 aa1.67□□□□□ -2.14
SEC16YPL085W YGL260WP53056 76 aa1.67□□□□□ -2.14
SEC16YPL085W YOR314WQ12506 109 aa1.67□□□□□ -2.14
SEC16YPL085W UTP20P35194 2493 aaKnown RBP1.67□□□□□ -2.14
SEC16YPL085W CAX4P53223 239 aa1.66□□□□□ -2.14
SEC16YPL085W YHL018WP38744 120 aaPredicted RBP1.66□□□□□ -2.14
SEC16YPL085W ICS3P47034 131 aa1.66□□□□□ -2.14
SEC16YPL085W ATO3Q12359 275 aa1.66□□□□□ -2.14
SEC16YPL085W YPR053CQ6Q5F3 151 aa1.66□□□□□ -2.14
SEC16YPL085W MIG1P27705 504 aa1.66□□□□□ -2.14
SEC16YPL085W YCL048W-AQ2V2Q2 79 aa1.66□□□□□ -2.14
SEC16YPL085W YIL134C-AQ45U18 67 aa1.66□□□□□ -2.14
SEC16YPL085W BRR2P32639 2163 aaKnown RBP1.66□□□□□ -2.14
SEC16YPL085W YHR212W-AP0CX91 67 aa1.66□□□□□ -2.14
SEC16YPL085W COX23P38824 151 aa1.66□□□□□ -2.14
SEC16YPL085W PBA1Q05778 276 aa1.66□□□□□ -2.14
SEC16YPL085W YER175W-AQ8TGU4 54 aa1.66□□□□□ -2.14
SEC16YPL085W RIF1P29539 1916 aa1.66□□□□□ -2.14
SEC16YPL085W YKR045CP36138 183 aa1.66□□□□□ -2.14
SEC16YPL085W GAT4P40569 121 aa1.65□□□□□ -2.14
SEC16YPL085W ATP18P81450 59 aa1.65□□□□□ -2.14
SEC16YPL085W DDR2P89113 61 aa1.65□□□□□ -2.14
SEC16YPL085W URA2P07259 2214 aaKnown RBP1.65□□□□□ -2.14
SEC16YPL085W YPR170W-BP0C5R9 85 aa1.65□□□□□ -2.14
SEC16YPL085W PBI2P0CT04 75 aaKnown RBP1.65□□□□□ -2.14
SEC16YPL085W FZF1P32805 299 aa1.65□□□□□ -2.14
SEC16YPL085W YDL157CQ12082 118 aa1.65□□□□□ -2.14
SEC16YPL085W IGD1P43598 195 aa1.65□□□□□ -2.15
SEC16YPL085W YGL088WP53151 121 aa1.65□□□□□ -2.15
SEC16YPL085W POL2P21951 2222 aaKnown RBP1.65□□□□□ -2.15
SEC16YPL085W SEN15Q04675 128 aa1.65□□□□□ -2.15
SEC16YPL085W YAL063C-AQ3E791 96 aa1.65□□□□□ -2.15
SEC16YPL085W EDC1P53080 175 aaPredicted RBP1.65□□□□□ -2.15
SEC16YPL085W YNL184CP53876 108 aa1.65□□□□□ -2.15
SEC16YPL085W MRP10O75012 95 aa1.64□□□□□ -2.15
SEC16YPL085W YDL022C-AP0C5L6 82 aa1.64□□□□□ -2.15
SEC16YPL085W YGL193CP53097 103 aa1.64□□□□□ -2.15
SEC16YPL085W SNA2P56508 79 aa1.64□□□□□ -2.15
SEC16YPL085W CMC4Q3E7A9 73 aa1.64□□□□□ -2.15
SEC16YPL085W YFL051CP43552 160 aa1.64□□□□□ -2.15
SEC16YPL085W YJR085CP47131 105 aaKnown RBP1.64□□□□□ -2.15
SEC16YPL085W YOR381W-AQ3E804 55 aa1.64□□□□□ -2.15
SEC16YPL085W COX7P10174 60 aa1.64□□□□□ -2.15
SEC16YPL085W TMC1Q08422 150 aaPredicted RBP1.64□□□□□ -2.15
SEC16YPL085W YOR072WQ08486 104 aa1.64□□□□□ -2.15
SEC16YPL085W RPL33AP05744 107 aaKnown RBP1.64□□□□□ -2.15
SEC16YPL085W RPL33BP41056 107 aaKnown RBP1.64□□□□□ -2.15
SEC16YPL085W YML054C-AQ3E809 52 aa1.64□□□□□ -2.15
SEC16YPL085W MPC3P53311 146 aa1.64□□□□□ -2.15
SEC16YPL085W LCL2Q08045 131 aa1.64□□□□□ -2.15
SEC16YPL085W YLR255CO13574 117 aa1.63□□□□□ -2.15
SEC16YPL085W COF1Q03048 143 aaKnown RBP1.63□□□□□ -2.15
SEC16YPL085W YJL127C-BQ3E828 52 aa1.63□□□□□ -2.15
SEC16YPL085W TOM6P33448 61 aa1.63□□□□□ -2.15
SEC16YPL085W YDR114CQ04597 100 aa1.63□□□□□ -2.15
SEC16YPL085W MIC10Q96VH5 97 aa1.63□□□□□ -2.15
SEC16YPL085W YHR073W-AP0C5N7 58 aa1.63□□□□□ -2.15
SEC16YPL085W Q0017Q9ZZX8 53 aa1.63□□□□□ -2.15
SEC16YPL085W ACC1Q00955 2233 aaKnown RBP1.63□□□□□ -2.15
SEC16YPL085W YAL065CO13511 128 aa1.63□□□□□ -2.15
SEC16YPL085W SAP30P38429 201 aa1.63□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms