RNA–Protein interactions for RNA: YPL004C

LSP1, Transcript of Eisosome core component, yeastyeast

Gene LSP1, Length 1,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSP1YPL004C HAP3P13434 144 aa5.27□□□□□ -1.57
LSP1YPL004C RPF1P38805 295 aaKnown RBP5.27□□□□□ -1.57
LSP1YPL004C MSL1P40567 111 aaPredicted RBP5.27□□□□□ -1.57
LSP1YPL004C MVB12P42939 101 aa5.27□□□□□ -1.57
LSP1YPL004C CWP2P43497 92 aa5.27□□□□□ -1.57
LSP1YPL004C YNR077CP53758 84 aa5.27□□□□□ -1.57
LSP1YPL004C YPL073CP40323 161 aa5.26□□□□□ -1.57
LSP1YPL004C ABF2Q02486 183 aa5.26□□□□□ -1.57
LSP1YPL004C YDL157CQ12082 118 aa5.26□□□□□ -1.57
LSP1YPL004C IGO2Q9P305 131 aa5.26□□□□□ -1.57
LSP1YPL004C RPL28P02406 149 aaKnown RBP5.25□□□□□ -1.57
LSP1YPL004C YCR007CP25354 239 aa5.25□□□□□ -1.57
LSP1YPL004C YFL019CP43576 117 aa5.25□□□□□ -1.57
LSP1YPL004C CGR1P53188 120 aa5.25□□□□□ -1.57
LSP1YPL004C YBL039W-BP0C268 59 aa5.24□□□□□ -1.57
LSP1YPL004C CDC43P18898 376 aa5.24□□□□□ -1.57
LSP1YPL004C FYV7Q12247 151 aa5.24□□□□□ -1.57
LSP1YPL004C FUN14P18411 198 aa5.23□□□□□ -1.57
LSP1YPL004C UGX2P32772 223 aa5.23□□□□□ -1.57
LSP1YPL004C UBC11P52492 156 aa5.23□□□□□ -1.57
LSP1YPL004C RPL29P05747 59 aaPredicted RBP5.22□□□□□ -1.57
LSP1YPL004C AIM19P40502 157 aa5.22□□□□□ -1.57
LSP1YPL004C YNL190WP53872 204 aa5.22□□□□□ -1.57
LSP1YPL004C YLL006W-AQ3E814 58 aa5.22□□□□□ -1.57
LSP1YPL004C Q0032Q9ZZX7 96 aa5.22□□□□□ -1.57
LSP1YPL004C IGD1P43598 195 aa5.21□□□□□ -1.58
LSP1YPL004C YML079WQ03629 201 aa5.21□□□□□ -1.58
LSP1YPL004C NAT5Q08689 176 aa5.21□□□□□ -1.58
LSP1YPL004C MMS2P53152 137 aa5.2□□□□□ -1.58
LSP1YPL004C YFR057WP43625 151 aa5.19□□□□□ -1.58
LSP1YPL004C YGL193CP53097 103 aa5.19□□□□□ -1.58
LSP1YPL004C HPA2Q06592 156 aa5.19□□□□□ -1.58
LSP1YPL004C YKL023C-AQ2V2P3 75 aa5.19□□□□□ -1.58
LSP1YPL004C ATP5P09457 212 aa5.18□□□□□ -1.58
LSP1YPL004C UBC4P15731 148 aa5.17□□□□□ -1.58
LSP1YPL004C LSM8P47093 109 aaKnown RBP5.17□□□□□ -1.58
LSP1YPL004C YFL067WP43537 175 aa5.16□□□□□ -1.58
LSP1YPL004C YNL162W-AQ3E7A8 72 aa5.16□□□□□ -1.58
LSP1YPL004C YBL112CQ3E7Y4 105 aa5.16□□□□□ -1.58
LSP1YPL004C YOR020W-AQ3E824 90 aa5.16□□□□□ -1.58
LSP1YPL004C RGM1Q00453 211 aa5.15□□□□□ -1.59
LSP1YPL004C MID2P36027 376 aa5.14□□□□□ -1.59
LSP1YPL004C YIA6P40556 373 aa5.14□□□□□ -1.59
LSP1YPL004C KNH1P50112 268 aa5.13□□□□□ -1.59
LSP1YPL004C YDL085C-AQ3E7B7 68 aaKnown RBP5.13□□□□□ -1.59
LSP1YPL004C CPR1P14832 162 aaKnown RBP5.12□□□□□ -1.59
LSP1YPL004C DDR48P18899 430 aaKnown RBP5.12□□□□□ -1.59
LSP1YPL004C SCM4P32564 187 aa5.12□□□□□ -1.59
LSP1YPL004C PAU23Q07987 124 aa5.12□□□□□ -1.59
LSP1YPL004C PAU17Q12370 124 aa5.12□□□□□ -1.59
LSP1YPL004C COX10P21592 462 aa5.11□□□□□ -1.59
LSP1YPL004C ELC1Q03071 99 aa5.11□□□□□ -1.59
LSP1YPL004C YLR415CO13578 112 aa5.1□□□□□ -1.59
LSP1YPL004C YER039C-AP0CD97 72 aa5.1□□□□□ -1.59
LSP1YPL004C ICY1Q04329 127 aa5.1□□□□□ -1.59
LSP1YPL004C IRC21Q04772 201 aa5.1□□□□□ -1.59
LSP1YPL004C RPL26AP05743 127 aaKnown RBP5.09□□□□□ -1.59
LSP1YPL004C RPL26BP53221 127 aaKnown RBP5.09□□□□□ -1.59
LSP1YPL004C SAE3P89114 91 aa5.09□□□□□ -1.59
LSP1YPL004C MHR1Q06630 226 aa5.09□□□□□ -1.59
LSP1YPL004C EOS1P53938 366 aa5.08□□□□□ -1.6
LSP1YPL004C YHR130CP38834 111 aa5.07□□□□□ -1.6
LSP1YPL004C YPL257WQ08974 193 aa5.07□□□□□ -1.6
LSP1YPL004C YNL042W-BQ3E7Z2 85 aa5.07□□□□□ -1.6
LSP1YPL004C YLR363W-AQ3E747 85 aa5.06□□□□□ -1.6
LSP1YPL004C ARO2P28777 376 aaKnown RBP5.05□□□□□ -1.6
LSP1YPL004C SPT4P32914 102 aaPredicted RBP5.05□□□□□ -1.6
LSP1YPL004C EDC2P40023 145 aaPredicted RBP5.05□□□□□ -1.6
LSP1YPL004C YDR010CQ12426 110 aa5.05□□□□□ -1.6
LSP1YPL004C YBR230W-AQ3E762 66 aa5.05□□□□□ -1.6
LSP1YPL004C YLR156WP0CE96 114 aa5.04□□□□□ -1.6
LSP1YPL004C YLR159WP0CE97 114 aa5.04□□□□□ -1.6
LSP1YPL004C YLR161WP0CE98 114 aa5.04□□□□□ -1.6
LSP1YPL004C DUT1P33317 147 aa5.04□□□□□ -1.6
LSP1YPL004C YER181CP40097 107 aa5.04□□□□□ -1.6
LSP1YPL004C YGL149WP53116 101 aa5.04□□□□□ -1.6
LSP1YPL004C DDR2P89113 61 aa5.04□□□□□ -1.6
LSP1YPL004C YGR121W-AQ3E816 71 aa5.04□□□□□ -1.6
LSP1YPL004C HYP2P23301 157 aaKnown RBP5.03□□□□□ -1.6
LSP1YPL004C FYV5P25585 152 aa5.03□□□□□ -1.6
LSP1YPL004C YJL127C-BQ3E828 52 aa5.03□□□□□ -1.6
LSP1YPL004C SPG1P50088 95 aa5.02□□□□□ -1.61
LSP1YPL004C YLR296WQ05898 108 aa5.02□□□□□ -1.61
LSP1YPL004C POP7P38291 140 aa5.01□□□□□ -1.61
LSP1YPL004C YOR268CQ08734 132 aa5.01□□□□□ -1.61
LSP1YPL004C NHP2P32495 156 aaPredicted RBP5□□□□□ -1.61
LSP1YPL004C MRPL24P36525 258 aaPredicted RBP5□□□□□ -1.61
LSP1YPL004C YOR034C-AQ3E735 80 aa5□□□□□ -1.61
LSP1YPL004C YLR236CA0A023PZG4 107 aa4.99□□□□□ -1.61
LSP1YPL004C PAI3P01094 68 aa4.99□□□□□ -1.61
LSP1YPL004C YJR085CP47131 105 aaKnown RBP4.99□□□□□ -1.61
LSP1YPL004C LSM6Q06406 86 aaKnown RBP4.99□□□□□ -1.61
LSP1YPL004C MSA2P36157 363 aa4.98□□□□□ -1.61
LSP1YPL004C GLC8P41818 229 aa4.97□□□□□ -1.61
LSP1YPL004C BSC4P53841 131 aa4.96□□□□□ -1.62
LSP1YPL004C CWC27Q02770 301 aa4.96□□□□□ -1.62
LSP1YPL004C KRE1P17260 313 aa4.95□□□□□ -1.62
LSP1YPL004C HUR1P45820 110 aa4.95□□□□□ -1.62
LSP1YPL004C SFT1P43682 97 aa4.94□□□□□ -1.62
LSP1YPL004C YHR007C-AQ07074 71 aa4.93□□□□□ -1.62
Retrieved 100 of 5,963 RNA–protein pairs in 25.1 ms