RNA–Protein interactions for RNA: YMR247C

RKR1, Transcript of RING domain E3 ubiquitin ligase, yeastyeast

Gene RKR1, Length 4,689 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RKR1YMR247C YPL261CQ08976 102 aa0.41□□□□□ -2.34
RKR1YMR247C FAS1P07149 2051 aaKnown RBP0.41□□□□□ -2.34
RKR1YMR247C YAL065CO13511 128 aa0.41□□□□□ -2.34
RKR1YMR247C TOM6P33448 61 aa0.41□□□□□ -2.34
RKR1YMR247C BRP1P53194 125 aa0.41□□□□□ -2.34
RKR1YMR247C COA4Q05809 96 aa0.41□□□□□ -2.34
RKR1YMR247C YBR072C-AQ3E794 53 aa0.41□□□□□ -2.34
RKR1YMR247C MRS4P23500 304 aa0.41□□□□□ -2.34
RKR1YMR247C YDR381C-AQ3E6R5 114 aa0.41□□□□□ -2.34
RKR1YMR247C RPL22AP05749 121 aaKnown RBP0.4□□□□□ -2.34
RKR1YMR247C YGL014C-AP0C5N1 53 aa0.4□□□□□ -2.34
RKR1YMR247C PDX3P38075 228 aaKnown RBP0.4□□□□□ -2.34
RKR1YMR247C YHR173CP38864 112 aa0.4□□□□□ -2.34
RKR1YMR247C YOS1Q3E834 85 aa0.4□□□□□ -2.34
RKR1YMR247C TAO3P40468 2376 aa0.4□□□□□ -2.35
RKR1YMR247C YCR099CP25657 155 aa0.4□□□□□ -2.35
RKR1YMR247C ACP1P32463 125 aa0.4□□□□□ -2.35
RKR1YMR247C ICS3P47034 131 aa0.4□□□□□ -2.35
RKR1YMR247C YGR035W-AQ45U48 73 aa0.4□□□□□ -2.35
RKR1YMR247C LST8P41318 303 aa0.4□□□□□ -2.35
RKR1YMR247C CDC39P25655 2108 aaKnown RBP0.4□□□□□ -2.35
RKR1YMR247C QCR10P37299 77 aa0.4□□□□□ -2.35
RKR1YMR247C CYB5P40312 120 aa0.4□□□□□ -2.35
RKR1YMR247C YJL218WP40892 196 aaKnown RBP0.4□□□□□ -2.35
RKR1YMR247C RPS29BP41058 56 aaKnown RBP0.4□□□□□ -2.35
RKR1YMR247C APS2Q00381 147 aa0.4□□□□□ -2.35
RKR1YMR247C YMR090WQ04304 227 aaKnown RBP0.4□□□□□ -2.35
RKR1YMR247C SOM1Q05676 74 aa0.4□□□□□ -2.35
RKR1YMR247C RPL40AP0CH08 128 aaKnown RBP0.39□□□□□ -2.35
RKR1YMR247C RPL40BP0CH09 128 aaKnown RBP0.39□□□□□ -2.35
RKR1YMR247C SMX2P40204 77 aaKnown RBP0.39□□□□□ -2.35
RKR1YMR247C DAD1Q12248 94 aa0.39□□□□□ -2.35
RKR1YMR247C YPL038W-AQ3E7B4 63 aa0.39□□□□□ -2.35
RKR1YMR247C ECM12O13529 151 aa0.39□□□□□ -2.35
RKR1YMR247C DYN2Q02647 92 aa0.39□□□□□ -2.35
RKR1YMR247C YMR320WQ04897 101 aa0.39□□□□□ -2.35
RKR1YMR247C YDR010CQ12426 110 aa0.39□□□□□ -2.35
RKR1YMR247C YIL014C-AQ02598 104 aa0.39□□□□□ -2.35
RKR1YMR247C YDR042CQ03205 200 aa0.39□□□□□ -2.35
RKR1YMR247C YGR240C-AQ3E786 66 aa0.39□□□□□ -2.35
RKR1YMR247C VMA9Q3E7B6 73 aa0.39□□□□□ -2.35
RKR1YMR247C YLR307C-AQ3E825 87 aa0.39□□□□□ -2.35
RKR1YMR247C RPB11P38902 120 aa0.38□□□□□ -2.35
RKR1YMR247C YPR145C-AQ2V2P0 78 aa0.38□□□□□ -2.35
RKR1YMR247C YSF3P0C074 85 aaPredicted RBP0.38□□□□□ -2.35
RKR1YMR247C YLR157W-EP0CF00 54 aa0.38□□□□□ -2.35
RKR1YMR247C HUR1P45820 110 aa0.38□□□□□ -2.35
RKR1YMR247C YJR128WP47162 119 aa0.38□□□□□ -2.35
RKR1YMR247C YOR034C-AQ3E735 80 aa0.38□□□□□ -2.35
RKR1YMR247C YDR182W-AQ3E796 67 aa0.38□□□□□ -2.35
RKR1YMR247C YOL166W-AQ8TGJ1 51 aa0.38□□□□□ -2.35
RKR1YMR247C PAU21P0CE86 164 aa0.38□□□□□ -2.35
RKR1YMR247C PAU22P0CE87 164 aa0.38□□□□□ -2.35
RKR1YMR247C MRP17P28778 131 aa0.38□□□□□ -2.35
RKR1YMR247C HSP150P32478 413 aa0.38□□□□□ -2.35
RKR1YMR247C YNL198CP40166 100 aa0.38□□□□□ -2.35
RKR1YMR247C SNN1P48232 102 aa0.38□□□□□ -2.35
RKR1YMR247C AVO2Q04749 426 aa0.38□□□□□ -2.35
RKR1YMR247C YOR343CQ12484 108 aa0.38□□□□□ -2.35
RKR1YMR247C YCR050CP25630 102 aa0.38□□□□□ -2.35
RKR1YMR247C YCL001W-BQ96VH2 84 aa0.38□□□□□ -2.35
RKR1YMR247C SNU13P39990 126 aaKnown RBP0.37□□□□□ -2.35
RKR1YMR247C FIT3Q08907 204 aa0.37□□□□□ -2.35
RKR1YMR247C YFL041W-AQ3E817 63 aa0.37□□□□□ -2.35
RKR1YMR247C YCR085WP25650 117 aa0.37□□□□□ -2.35
RKR1YMR247C SNA2P56508 79 aa0.37□□□□□ -2.35
RKR1YMR247C SGF11Q03067 99 aa0.37□□□□□ -2.35
RKR1YMR247C YPL225WQ08971 146 aaKnown RBP0.37□□□□□ -2.35
RKR1YMR247C YMR103CQ04436 120 aa0.37□□□□□ -2.35
RKR1YMR247C YDL241WQ07738 123 aa0.37□□□□□ -2.35
RKR1YMR247C YNR034W-AQ3E841 98 aa0.37□□□□□ -2.35
RKR1YMR247C NHP2P32495 156 aaPredicted RBP0.37□□□□□ -2.35
RKR1YMR247C YOL118CQ08259 102 aa0.37□□□□□ -2.35
RKR1YMR247C HMRA2P0CY13 119 aa0.36□□□□□ -2.35
RKR1YMR247C YAL064WP39711 94 aa0.36□□□□□ -2.35
RKR1YMR247C YER187WP40102 141 aa0.36□□□□□ -2.35
RKR1YMR247C YCL048W-AQ2V2Q2 79 aa0.36□□□□□ -2.35
RKR1YMR247C BLM10P43583 2143 aa0.36□□□□□ -2.35
RKR1YMR247C RTC6O14464 93 aa0.36□□□□□ -2.35
RKR1YMR247C PAU19P0CE85 124 aa0.36□□□□□ -2.35
RKR1YMR247C PAU3P25610 124 aa0.36□□□□□ -2.35
RKR1YMR247C TRS20P38334 175 aa0.36□□□□□ -2.35
RKR1YMR247C YOR314WQ12506 109 aa0.36□□□□□ -2.35
RKR1YMR247C ROX3P25046 220 aa0.36□□□□□ -2.35
RKR1YMR247C YHR138CP38841 114 aaPredicted RBP0.36□□□□□ -2.35
RKR1YMR247C SCP1Q08873 200 aa0.36□□□□□ -2.35
RKR1YMR247C COX19Q3E731 98 aa0.36□□□□□ -2.35
RKR1YMR247C YIL134C-AQ45U18 67 aa0.36□□□□□ -2.35
RKR1YMR247C PAU16P35994 123 aa0.35□□□□□ -2.35
RKR1YMR247C MSL1P40567 111 aaPredicted RBP0.35□□□□□ -2.35
RKR1YMR247C YLR194CQ05777 254 aa0.35□□□□□ -2.35
RKR1YMR247C PAU20Q08322 120 aa0.35□□□□□ -2.35
RKR1YMR247C YLR099W-AQ3E798 87 aa0.35□□□□□ -2.35
RKR1YMR247C CMC4Q3E7A9 73 aa0.35□□□□□ -2.35
RKR1YMR247C YKL044WP36092 106 aa0.35□□□□□ -2.35
RKR1YMR247C TIM8P57744 87 aa0.35□□□□□ -2.35
RKR1YMR247C YDR029WQ12111 104 aa0.35□□□□□ -2.35
RKR1YMR247C PCC1Q3E833 88 aa0.35□□□□□ -2.35
RKR1YMR247C YIL163CP40448 117 aa0.35□□□□□ -2.35
RKR1YMR247C EMC5P40540 141 aa0.35□□□□□ -2.35
Retrieved 100 of 5,963 RNA–protein pairs in 53.9 ms