RNA–Protein interactions for RNA: YMR048W

CSM3, Transcript of Replication fork associated factor, yeastyeast

Gene CSM3, Length 954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSM3YMR048W HUA1P40325 198 aa2.2□□□□□ -2.06
CSM3YMR048W RPL33BP41056 107 aaKnown RBP2.2□□□□□ -2.06
CSM3YMR048W YGR025WP53216 100 aa2.2□□□□□ -2.06
CSM3YMR048W YMR103CQ04436 120 aa2.2□□□□□ -2.06
CSM3YMR048W AUA1P32450 94 aa2.19□□□□□ -2.06
CSM3YMR048W RPF1P38805 295 aaKnown RBP2.19□□□□□ -2.06
CSM3YMR048W YNL200CP40165 246 aaKnown RBP2.19□□□□□ -2.06
CSM3YMR048W YIL014C-AQ02598 104 aa2.19□□□□□ -2.06
CSM3YMR048W YIL134C-AQ45U18 67 aa2.19□□□□□ -2.06
CSM3YMR048W FUN14P18411 198 aa2.18□□□□□ -2.06
CSM3YMR048W MRPL44P19956 98 aa2.18□□□□□ -2.06
CSM3YMR048W YRA2P36036 203 aaKnown RBP RIP-Chip data2.18□□□□□ -2.06not detected
CSM3YMR048W MSA2P36157 363 aa2.18□□□□□ -2.06
CSM3YMR048W NRG2P38082 220 aa2.18□□□□□ -2.06
CSM3YMR048W YER134CP40081 178 aa2.18□□□□□ -2.06
CSM3YMR048W RPC10P40422 70 aa2.18□□□□□ -2.06
CSM3YMR048W MSL1P40567 111 aaPredicted RBP2.18□□□□□ -2.06
CSM3YMR048W GLC8P41818 229 aa2.18□□□□□ -2.06
CSM3YMR048W SAE3P89114 91 aa2.18□□□□□ -2.06
CSM3YMR048W YLR194CQ05777 254 aa2.18□□□□□ -2.06
CSM3YMR048W YGL041C-BQ3E750 60 aa2.18□□□□□ -2.06
CSM3YMR048W IGO2Q9P305 131 aa2.18□□□□□ -2.06
CSM3YMR048W SEC11P15367 167 aa2.17□□□□□ -2.06
CSM3YMR048W YBR209WP38311 105 aa2.17□□□□□ -2.06
CSM3YMR048W YGL230CP53074 147 aa2.17□□□□□ -2.06
CSM3YMR048W PAU23Q07987 124 aa2.17□□□□□ -2.06
CSM3YMR048W PAU17Q12370 124 aa2.17□□□□□ -2.06
CSM3YMR048W LSO2Q3E772 92 aaKnown RBP2.17□□□□□ -2.06
CSM3YMR048W COA3Q3E7B2 85 aa2.17□□□□□ -2.06
CSM3YMR048W UTP20P35194 2493 aaKnown RBP2.16□□□□□ -2.06
CSM3YMR048W YHR032W-AP0C5N6 59 aa2.16□□□□□ -2.06
CSM3YMR048W SHU1P38751 150 aa2.16□□□□□ -2.06
CSM3YMR048W SVP26P38869 228 aa2.16□□□□□ -2.06
CSM3YMR048W YEL008WP40001 126 aa2.16□□□□□ -2.06
CSM3YMR048W VTC1P40046 129 aaRIP-Chip data2.16□□□□□ -2.06not detected
CSM3YMR048W YPL073CP40323 161 aa2.16□□□□□ -2.06
CSM3YMR048W YMR320WQ04897 101 aa2.16□□□□□ -2.06
CSM3YMR048W YPL257WQ08974 193 aa2.16□□□□□ -2.06
CSM3YMR048W YPL261CQ08976 102 aa2.16□□□□□ -2.06
CSM3YMR048W YPL229WQ99395 206 aa2.16□□□□□ -2.06
CSM3YMR048W YAR023CD6VPM8 179 aa2.15□□□□□ -2.07
CSM3YMR048W PRE1P22141 198 aaKnown RBP2.15□□□□□ -2.07
CSM3YMR048W SCM4P32564 187 aa2.15□□□□□ -2.07
CSM3YMR048W YKR041WP36134 250 aa2.15□□□□□ -2.07
CSM3YMR048W YHR125WP38831 101 aa2.15□□□□□ -2.07
CSM3YMR048W CIN5P40917 295 aa2.15□□□□□ -2.07
CSM3YMR048W YFL019CP43576 117 aa2.15□□□□□ -2.07
CSM3YMR048W AIM11P87275 137 aa2.15□□□□□ -2.07
CSM3YMR048W ABF2Q02486 183 aa2.15□□□□□ -2.07
CSM3YMR048W YDL157CQ12082 118 aa2.15□□□□□ -2.07
CSM3YMR048W EMC6Q12431 108 aa2.15□□□□□ -2.07
CSM3YMR048W YLR363W-AQ3E747 85 aa2.15□□□□□ -2.07
CSM3YMR048W YOR020W-AQ3E824 90 aa2.15□□□□□ -2.07
CSM3YMR048W MBF1O14467 151 aaKnown RBP2.14□□□□□ -2.07
CSM3YMR048W ATP15P21306 62 aa2.14□□□□□ -2.07
CSM3YMR048W POP7P38291 140 aa2.14□□□□□ -2.07
CSM3YMR048W YKL023C-AQ2V2P3 75 aa2.14□□□□□ -2.07
CSM3YMR048W YAL065CO13511 128 aa2.13□□□□□ -2.07
CSM3YMR048W RPL29P05747 59 aaPredicted RBP2.13□□□□□ -2.07
CSM3YMR048W AQY2P0CD90 149 aa2.13□□□□□ -2.07
CSM3YMR048W YER039C-AP0CD97 72 aa2.13□□□□□ -2.07
CSM3YMR048W ANB1P19211 157 aa2.13□□□□□ -2.07
CSM3YMR048W YER085CP40058 173 aa2.13□□□□□ -2.07
CSM3YMR048W ELC1Q03071 99 aa2.13□□□□□ -2.07
CSM3YMR048W YMR295CQ03559 197 aa2.13□□□□□ -2.07
CSM3YMR048W NAT5Q08689 176 aa2.13□□□□□ -2.07
CSM3YMR048W YLL066W-BQ8TGJ7 56 aa2.13□□□□□ -2.07
CSM3YMR048W YBL039W-BP0C268 59 aa2.12□□□□□ -2.07
CSM3YMR048W YHR130CP38834 111 aa2.12□□□□□ -2.07
CSM3YMR048W YER181CP40097 107 aa2.12□□□□□ -2.07
CSM3YMR048W CWP2P43497 92 aa2.12□□□□□ -2.07
CSM3YMR048W SNA2P56508 79 aa2.12□□□□□ -2.07
CSM3YMR048W SEN15Q04675 128 aa2.12□□□□□ -2.07
CSM3YMR048W YDR029WQ12111 104 aa2.12□□□□□ -2.07
CSM3YMR048W ECM12O13529 151 aa2.11□□□□□ -2.07
CSM3YMR048W PAI3P01094 68 aa2.11□□□□□ -2.07
CSM3YMR048W YDR034C-AP0C289 58 aa2.11□□□□□ -2.07
CSM3YMR048W NHP2P32495 156 aaPredicted RBP2.11□□□□□ -2.07
CSM3YMR048W MVB12P42939 101 aa2.11□□□□□ -2.07
CSM3YMR048W SFT1P43682 97 aa2.11□□□□□ -2.07
CSM3YMR048W UGX2P32772 223 aa2.1□□□□□ -2.07
CSM3YMR048W YNL190WP53872 204 aa2.1□□□□□ -2.07
CSM3YMR048W LCL1Q02786 101 aa2.1□□□□□ -2.07
CSM3YMR048W YLR296WQ05898 108 aa2.1□□□□□ -2.07
CSM3YMR048W Q0032Q9ZZX7 96 aa2.1□□□□□ -2.07
CSM3YMR048W YBR219CP38317 127 aa2.09□□□□□ -2.07
CSM3YMR048W YAL064WP39711 94 aa2.09□□□□□ -2.07
CSM3YMR048W LSM6Q06406 86 aaKnown RBP2.09□□□□□ -2.07
CSM3YMR048W HPA2Q06592 156 aa2.09□□□□□ -2.07
CSM3YMR048W YHR086W-AQ3E746 53 aa2.09□□□□□ -2.07
CSM3YMR048W RPL28P02406 149 aaKnown RBP2.08□□□□□ -2.08
CSM3YMR048W UBC4P15731 148 aa2.08□□□□□ -2.08
CSM3YMR048W MRPL24P36525 258 aaPredicted RBP2.08□□□□□ -2.08
CSM3YMR048W AIM19P40502 157 aa2.08□□□□□ -2.08
CSM3YMR048W ICY1Q04329 127 aa2.08□□□□□ -2.08
CSM3YMR048W YIL102C-AQ2V2P5 75 aa2.08□□□□□ -2.08
CSM3YMR048W YLL006W-AQ3E814 58 aa2.08□□□□□ -2.08
CSM3YMR048W YLR236CA0A023PZG4 107 aa2.07□□□□□ -2.08
CSM3YMR048W KNH1P50112 268 aa2.07□□□□□ -2.08
CSM3YMR048W MRPS12P53732 153 aa2.07□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 8.3 ms