RNA–Protein interactions for RNA: YMR038C

CCS1, Transcript of Copper chaperone for superoxide dismutase Sod1p, yeastyeast

Gene CCS1, Length 750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCS1YMR038C YLR159WP0CE97 114 aa2.8□□□□□ -1.96
CCS1YMR038C YLR161WP0CE98 114 aa2.8□□□□□ -1.96
CCS1YMR038C ATP15P21306 62 aa2.8□□□□□ -1.96
CCS1YMR038C ATG8P38182 117 aaRIP-Chip data2.8□□□□□ -1.96not detected
CCS1YMR038C RPF1P38805 295 aaKnown RBP2.8□□□□□ -1.96
CCS1YMR038C SMD1Q02260 146 aaPredicted RBP2.8□□□□□ -1.96
CCS1YMR038C Q0032Q9ZZX7 96 aa2.8□□□□□ -1.96
CCS1YMR038C PAU16P35994 123 aa2.79□□□□□ -1.96
CCS1YMR038C YDL241WQ07738 123 aa2.79□□□□□ -1.96
CCS1YMR038C COA3Q3E7B2 85 aa2.79□□□□□ -1.96
CCS1YMR038C RPS22BQ3E7Y3 130 aaKnown RBP2.79□□□□□ -1.96
CCS1YMR038C STF1P01098 86 aa2.78□□□□□ -1.96
CCS1YMR038C UBC4P15731 148 aa2.78□□□□□ -1.96
CCS1YMR038C GSP1P32835 219 aaKnown RBP2.77□□□□□ -1.97
CCS1YMR038C GSP2P32836 220 aaKnown RBP2.77□□□□□ -1.97
CCS1YMR038C YGL193CP53097 103 aa2.77□□□□□ -1.97
CCS1YMR038C ECM19Q06011 112 aa2.77□□□□□ -1.97
CCS1YMR038C RPL18AP0CX49 186 aaKnown RBP2.76□□□□□ -1.97
CCS1YMR038C RPL18BP0CX50 186 aaKnown RBP2.76□□□□□ -1.97
CCS1YMR038C SCM4P32564 187 aa2.76□□□□□ -1.97
CCS1YMR038C SHU1P38751 150 aa2.76□□□□□ -1.97
CCS1YMR038C MVB12P42939 101 aa2.76□□□□□ -1.97
CCS1YMR038C ERV14P53173 138 aa2.76□□□□□ -1.97
CCS1YMR038C YDR042CQ03205 200 aa2.76□□□□□ -1.97
CCS1YMR038C YOR268CQ08734 132 aa2.76□□□□□ -1.97
CCS1YMR038C YBL039W-BP0C268 59 aa2.75□□□□□ -1.97
CCS1YMR038C YFL019CP43576 117 aa2.75□□□□□ -1.97
CCS1YMR038C ABF2Q02486 183 aa2.75□□□□□ -1.97
CCS1YMR038C MRPL44P19956 98 aa2.74□□□□□ -1.97
CCS1YMR038C KNH1P50112 268 aa2.74□□□□□ -1.97
CCS1YMR038C CWC27Q02770 301 aa2.74□□□□□ -1.97
CCS1YMR038C FYV7Q12247 151 aa2.74□□□□□ -1.97
CCS1YMR038C YGL118CP53132 145 aa2.73□□□□□ -1.97
CCS1YMR038C AIM11P87275 137 aa2.73□□□□□ -1.97
CCS1YMR038C YPL080CQ02826 108 aa2.73□□□□□ -1.97
CCS1YMR038C ZEO1Q08245 113 aa2.73□□□□□ -1.97
CCS1YMR038C KSH1Q8TGJ3 72 aa2.73□□□□□ -1.97
CCS1YMR038C YDL022C-AP0C5L6 82 aa2.72□□□□□ -1.97
CCS1YMR038C EDC2P40023 145 aaPredicted RBP2.72□□□□□ -1.97
CCS1YMR038C NSE4P43124 402 aa2.72□□□□□ -1.97
CCS1YMR038C CYT2Q00873 224 aa2.72□□□□□ -1.97
CCS1YMR038C YMR103CQ04436 120 aa2.72□□□□□ -1.97
CCS1YMR038C YER134CP40081 178 aa2.71□□□□□ -1.98
CCS1YMR038C HHO1P53551 258 aa2.71□□□□□ -1.98
CCS1YMR038C POP3P53833 195 aaPredicted RBP2.71□□□□□ -1.98
CCS1YMR038C SEN15Q04675 128 aa2.71□□□□□ -1.98
CCS1YMR038C YLL006W-AQ3E814 58 aa2.71□□□□□ -1.98
CCS1YMR038C RPL27BP0C2H7 136 aaKnown RBP2.7□□□□□ -1.98
CCS1YMR038C FYV4P38783 130 aaPredicted RBP2.7□□□□□ -1.98
CCS1YMR038C MBF1O14467 151 aaKnown RBP2.69□□□□□ -1.98
CCS1YMR038C KRE1P17260 313 aa2.69□□□□□ -1.98
CCS1YMR038C SSS1P35179 80 aa2.69□□□□□ -1.98
CCS1YMR038C MRPS12P53732 153 aa2.69□□□□□ -1.98
CCS1YMR038C SAE3P89114 91 aa2.69□□□□□ -1.98
CCS1YMR038C YML079WQ03629 201 aa2.69□□□□□ -1.98
CCS1YMR038C YKL023C-AQ2V2P3 75 aa2.69□□□□□ -1.98
CCS1YMR038C HTL1Q9URQ5 78 aa2.69□□□□□ -1.98
CCS1YMR038C RPL28P02406 149 aaKnown RBP2.68□□□□□ -1.98
CCS1YMR038C PEX17P40155 199 aa2.68□□□□□ -1.98
CCS1YMR038C DDR2P89113 61 aa2.68□□□□□ -1.98
CCS1YMR038C YPL261CQ08976 102 aa2.68□□□□□ -1.98
CCS1YMR038C YOR304C-AO14468 76 aa2.67□□□□□ -1.98
CCS1YMR038C YER039C-AP0CD97 72 aa2.67□□□□□ -1.98
CCS1YMR038C SPG1P50088 95 aa2.67□□□□□ -1.98
CCS1YMR038C YNL190WP53872 204 aa2.67□□□□□ -1.98
CCS1YMR038C YNL184CP53876 108 aa2.67□□□□□ -1.98
CCS1YMR038C RPL29P05747 59 aaPredicted RBP2.66□□□□□ -1.98
CCS1YMR038C QCR8P08525 94 aa2.66□□□□□ -1.98
CCS1YMR038C FUN14P18411 198 aa2.66□□□□□ -1.98
CCS1YMR038C YKR041WP36134 250 aa2.66□□□□□ -1.98
CCS1YMR038C MRPL11P36521 249 aaPredicted RBP2.66□□□□□ -1.98
CCS1YMR038C YAR1P46683 200 aa2.66□□□□□ -1.98
CCS1YMR038C YPL257WQ08974 193 aa2.66□□□□□ -1.98
CCS1YMR038C YGR121W-AQ3E816 71 aa2.66□□□□□ -1.98
CCS1YMR038C UGX2P32772 223 aa2.65□□□□□ -1.99
CCS1YMR038C MRPL24P36525 258 aaPredicted RBP2.65□□□□□ -1.99
CCS1YMR038C YEL067CP39978 195 aa2.65□□□□□ -1.99
CCS1YMR038C HPA2Q06592 156 aa2.65□□□□□ -1.99
CCS1YMR038C YPL073CP40323 161 aa2.64□□□□□ -1.99
CCS1YMR038C YLR361C-AQ3E795 98 aa2.64□□□□□ -1.99
CCS1YMR038C YOR020W-AQ3E824 90 aa2.64□□□□□ -1.99
CCS1YMR038C ATP5P09457 212 aa2.63□□□□□ -1.99
CCS1YMR038C HAP3P13434 144 aa2.63□□□□□ -1.99
CCS1YMR038C GLC8P41818 229 aa2.63□□□□□ -1.99
CCS1YMR038C BSC4P53841 131 aa2.63□□□□□ -1.99
CCS1YMR038C CUE4Q04201 117 aaPredicted RBP2.63□□□□□ -1.99
CCS1YMR038C YBR230W-AQ3E762 66 aa2.63□□□□□ -1.99
CCS1YMR038C YAL063C-AQ3E791 96 aa2.63□□□□□ -1.99
CCS1YMR038C YNL042W-BQ3E7Z2 85 aa2.63□□□□□ -1.99
CCS1YMR038C SCS22Q6Q595 175 aa2.63□□□□□ -1.99
CCS1YMR038C SPT4P32914 102 aaPredicted RBP2.62□□□□□ -1.99
CCS1YMR038C YIL134C-AQ45U18 67 aa2.62□□□□□ -1.99
CCS1YMR038C YBR027CP38220 110 aa2.61□□□□□ -1.99
CCS1YMR038C YJL144WP47009 104 aa2.61□□□□□ -1.99
CCS1YMR038C RPL37BP51402 88 aaKnown RBP2.61□□□□□ -1.99
CCS1YMR038C YNR077CP53758 84 aa2.61□□□□□ -1.99
CCS1YMR038C YHR007C-AQ07074 71 aa2.61□□□□□ -1.99
CCS1YMR038C SLO1Q3E784 85 aa2.61□□□□□ -1.99
CCS1YMR038C YDL085C-AQ3E7B7 68 aaKnown RBP2.61□□□□□ -1.99
CCS1YMR038C YJL127C-BQ3E828 52 aa2.61□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 51.6 ms