RNA–Protein interactions for RNA: YMR012W

CLU1, Transcript of Subunit of the eukaryotic translation initiation factor 3 (eIF3), yeast

Gene CLU1, Length 3,834 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CLU1	YMR012W	MPC1	P53157	130 aa	Known RBP	0.51	□□□□□ -2.33
CLU1	YMR012W	PAM16	P42949	149 aa		0.51	□□□□□ -2.33
CLU1	YMR012W	YHR007C-A	Q07074	71 aa		0.51	□□□□□ -2.33
CLU1	YMR012W	YBR242W	P38331	238 aa		0.5	□□□□□ -2.33
CLU1	YMR012W	YDR029W	Q12111	104 aa		0.5	□□□□□ -2.33
CLU1	YMR012W	YOR304C-A	O14468	76 aa		0.5	□□□□□ -2.33
CLU1	YMR012W	RPL33A	P05744	107 aa	Known RBP	0.5	□□□□□ -2.33
CLU1	YMR012W	SEC11	P15367	167 aa		0.5	□□□□□ -2.33
CLU1	YMR012W	RPB7	P34087	171 aa		0.5	□□□□□ -2.33
CLU1	YMR012W	CUE4	Q04201	117 aa	Predicted RBP	0.5	□□□□□ -2.33
CLU1	YMR012W	OST5	Q92316	86 aa		0.5	□□□□□ -2.33
CLU1	YMR012W	HYR1	P40581	163 aa	Known RBP	0.49	□□□□□ -2.33
CLU1	YMR012W	YIL014C-A	Q02598	104 aa		0.49	□□□□□ -2.33
CLU1	YMR012W	ELC1	Q03071	99 aa		0.49	□□□□□ -2.33
CLU1	YMR012W	YKL044W	P36092	106 aa		0.49	□□□□□ -2.33
CLU1	YMR012W	CWC27	Q02770	301 aa		0.49	□□□□□ -2.33
CLU1	YMR012W	RUB1	Q03919	77 aa		0.49	□□□□□ -2.33
CLU1	YMR012W	DOC1	P53068	250 aa		0.48	□□□□□ -2.33
CLU1	YMR012W	RPL13A	Q12690	199 aa	Predicted RBP	0.48	□□□□□ -2.33
CLU1	YMR012W	YDR246W-A	Q3E763	66 aa		0.48	□□□□□ -2.33
CLU1	YMR012W	FPR2	P32472	135 aa		0.48	□□□□□ -2.33
CLU1	YMR012W	TIM12	P32830	109 aa		0.48	□□□□□ -2.33
CLU1	YMR012W	MED11	Q99278	115 aa		0.48	□□□□□ -2.33
CLU1	YMR012W	PAU12	P53343	120 aa		0.48	□□□□□ -2.33
CLU1	YMR012W	YML079W	Q03629	201 aa		0.48	□□□□□ -2.33
CLU1	YMR012W	CCW12	Q12127	133 aa		0.48	□□□□□ -2.33
CLU1	YMR012W	THG1	P53215	237 aa	Known RBP	0.47	□□□□□ -2.33
CLU1	YMR012W	RSM19	P53733	91 aa	Predicted RBP	0.47	□□□□□ -2.33
CLU1	YMR012W	YMR090W	Q04304	227 aa	Known RBP	0.47	□□□□□ -2.33
CLU1	YMR012W	YLR194C	Q05777	254 aa		0.47	□□□□□ -2.33
CLU1	YMR012W	YKL068W-A	Q3E826	78 aa		0.47	□□□□□ -2.33
CLU1	YMR012W	GRX5	Q02784	150 aa		0.47	□□□□□ -2.33
CLU1	YMR012W	TAR1	Q8TGM6	124 aa		0.47	□□□□□ -2.33
CLU1	YMR012W	POP3	P53833	195 aa	Predicted RBP	0.47	□□□□□ -2.33
CLU1	YMR012W	GPI19	Q04082	140 aa		0.47	□□□□□ -2.33
CLU1	YMR012W	GPI11	Q06636	219 aa		0.47	□□□□□ -2.33
CLU1	YMR012W	YOR015W	Q12169	119 aa		0.47	□□□□□ -2.33
CLU1	YMR012W	ECM12	O13529	151 aa		0.46	□□□□□ -2.34
CLU1	YMR012W	COX7	P10174	60 aa		0.46	□□□□□ -2.34
CLU1	YMR012W	PAU2	P32612	120 aa		0.46	□□□□□ -2.34
CLU1	YMR012W	TOM7	P53507	60 aa		0.46	□□□□□ -2.34
CLU1	YMR012W	YDR119W-A	Q2V2P9	66 aa		0.46	□□□□□ -2.34
CLU1	YMR012W	YGR121W-A	Q3E816	71 aa		0.46	□□□□□ -2.34
CLU1	YMR012W	ICS3	P47034	131 aa		0.46	□□□□□ -2.34
CLU1	YMR012W	HRT1	Q08273	121 aa		0.46	□□□□□ -2.34
CLU1	YMR012W	PFY1	P07274	126 aa		0.46	□□□□□ -2.34
CLU1	YMR012W	YGL014C-A	P0C5N1	53 aa		0.46	□□□□□ -2.34
CLU1	YMR012W	MRPL44	P19956	98 aa		0.46	□□□□□ -2.34
CLU1	YMR012W	YOR381W-A	Q3E804	55 aa		0.46	□□□□□ -2.34
CLU1	YMR012W	PAU24	P38155	120 aa		0.45	□□□□□ -2.34
CLU1	YMR012W	COX23	P38824	151 aa		0.45	□□□□□ -2.34
CLU1	YMR012W	IMP2	P46972	177 aa		0.45	□□□□□ -2.34
CLU1	YMR012W	HPA3	P39979	161 aa		0.45	□□□□□ -2.34
CLU1	YMR012W	YCL001W-B	Q96VH2	84 aa		0.45	□□□□□ -2.34
CLU1	YMR012W	AIM4	P38305	123 aa	Predicted RBP	0.45	□□□□□ -2.34
CLU1	YMR012W	RPB11	P38902	120 aa		0.45	□□□□□ -2.34
CLU1	YMR012W	YPR145C-A	Q2V2P0	78 aa		0.45	□□□□□ -2.34
CLU1	YMR012W	YCR001W	P25347	104 aa		0.44	□□□□□ -2.34
CLU1	YMR012W	SNU13	P39990	126 aa	Known RBP	0.44	□□□□□ -2.34
CLU1	YMR012W	GTT1	P40582	234 aa		0.44	□□□□□ -2.34
CLU1	YMR012W	SCP1	Q08873	200 aa		0.44	□□□□□ -2.34
CLU1	YMR012W	YGL194C-A	Q2V2P6	80 aa		0.44	□□□□□ -2.34
CLU1	YMR012W	YPL261C	Q08976	102 aa		0.44	□□□□□ -2.34
CLU1	YMR012W	ADK1	P07170	222 aa	Known RBP	0.44	□□□□□ -2.34
CLU1	YMR012W	FYV7	Q12247	151 aa		0.44	□□□□□ -2.34
CLU1	YMR012W	YBR209W	P38311	105 aa		0.43	□□□□□ -2.34
CLU1	YMR012W	RPL13B	P40212	199 aa	Known RBP	0.43	□□□□□ -2.34
CLU1	YMR012W	LSM8	P47093	109 aa	Known RBP	0.43	□□□□□ -2.34
CLU1	YMR012W	YML054C-A	Q3E809	52 aa		0.43	□□□□□ -2.34
CLU1	YMR012W	ATP19	P81451	68 aa		0.43	□□□□□ -2.34
CLU1	YMR012W	YGL149W	P53116	101 aa		0.42	□□□□□ -2.34
CLU1	YMR012W	YMR122W-A	Q3E842	84 aa		0.42	□□□□□ -2.34
CLU1	YMR012W	RPL26A	P05743	127 aa	Known RBP	0.42	□□□□□ -2.34
CLU1	YMR012W	INO4	P13902	151 aa		0.42	□□□□□ -2.34
CLU1	YMR012W	YHR138C	P38841	114 aa	Predicted RBP	0.42	□□□□□ -2.34
CLU1	YMR012W	YIL163C	P40448	117 aa		0.42	□□□□□ -2.34
CLU1	YMR012W	RPL26B	P53221	127 aa	Known RBP	0.42	□□□□□ -2.34
CLU1	YMR012W	YMR122C	Q03879	124 aa		0.42	□□□□□ -2.34
CLU1	YMR012W	ICY1	Q04329	127 aa		0.42	□□□□□ -2.34
CLU1	YMR012W	PRE1	P22141	198 aa	Known RBP	0.41	□□□□□ -2.34
CLU1	YMR012W	YHR130C	P38834	111 aa		0.41	□□□□□ -2.34
CLU1	YMR012W	DSE2	P38844	325 aa		0.41	□□□□□ -2.34
CLU1	YMR012W	RPS25B	P0C0T4	108 aa	Known RBP	0.41	□□□□□ -2.34
CLU1	YMR012W	COX19	Q3E731	98 aa		0.41	□□□□□ -2.34
CLU1	YMR012W	RPS25A	Q3E792	108 aa	Predicted RBP	0.41	□□□□□ -2.34
CLU1	YMR012W	YAR064W	P39563	99 aa		0.4	□□□□□ -2.34
CLU1	YMR012W	ERV14	P53173	138 aa		0.4	□□□□□ -2.34
CLU1	YMR012W	YLR162W	Q06235	118 aa		0.4	□□□□□ -2.35
CLU1	YMR012W	HMRA1	P0CY11	126 aa		0.4	□□□□□ -2.35
CLU1	YMR012W	SPI1	P40092	148 aa		0.4	□□□□□ -2.35
CLU1	YMR012W	RPC10	P40422	70 aa		0.4	□□□□□ -2.35
CLU1	YMR012W	SCS22	Q6Q595	175 aa		0.4	□□□□□ -2.35
CLU1	YMR012W	MRPL11	P36521	249 aa	Predicted RBP	0.39	□□□□□ -2.35
CLU1	YMR012W	RPL37A	P49166	88 aa	Known RBP	0.39	□□□□□ -2.35
CLU1	YMR012W	DAD3	P69850	94 aa		0.39	□□□□□ -2.35
CLU1	YMR012W	PMP3	P87284	55 aa		0.39	□□□□□ -2.35
CLU1	YMR012W	YGL258W-A	Q3E740	77 aa		0.39	□□□□□ -2.35
CLU1	YMR012W	YMR030W-A	Q3E760	96 aa		0.39	□□□□□ -2.35
CLU1	YMR012W	YCL001W-A	P87012	153 aa		0.39	□□□□□ -2.35
CLU1	YMR012W	YAL065C	O13511	128 aa		0.39	□□□□□ -2.35

Retrieved 100 of 5,963 RNA–protein pairs in 132.2 ms