RNA–Protein interactions for RNA: YLR411W

CTR3, Transcript of High-affinity copper transporter of the plasma membrane, yeastyeast

Gene CTR3, Length 726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTR3YLR411W YIR021W-AQ3E739 70 aa3.84□□□□□ -1.79
CTR3YLR411W FMP27Q06179 2628 aa3.83□□□□□ -1.8
CTR3YLR411W RPL2AP0CX45 254 aaKnown RBP3.83□□□□□ -1.8
CTR3YLR411W RPL2BP0CX46 254 aaKnown RBP3.83□□□□□ -1.8
CTR3YLR411W MSA2P36157 363 aa3.83□□□□□ -1.8
CTR3YLR411W MRPL24P36525 258 aaPredicted RBP3.83□□□□□ -1.8
CTR3YLR411W AIM19P40502 157 aa3.83□□□□□ -1.8
CTR3YLR411W HUR1P45820 110 aa3.83□□□□□ -1.8
CTR3YLR411W YDR381C-AQ3E6R5 114 aa3.83□□□□□ -1.8
CTR3YLR411W CWP2P43497 92 aa3.82□□□□□ -1.8
CTR3YLR411W ABF2Q02486 183 aa3.82□□□□□ -1.8
CTR3YLR411W SHH4Q06236 168 aa3.82□□□□□ -1.8
CTR3YLR411W RPS11AP0CX47 156 aaKnown RBP3.81□□□□□ -1.8
CTR3YLR411W RPS11BP0CX48 156 aaKnown RBP3.81□□□□□ -1.8
CTR3YLR411W TOA2P32774 122 aa3.81□□□□□ -1.8
CTR3YLR411W DSE2P38844 325 aa3.81□□□□□ -1.8
CTR3YLR411W SVP26P38869 228 aa3.81□□□□□ -1.8
CTR3YLR411W ALG13P53178 202 aa3.81□□□□□ -1.8
CTR3YLR411W CAX4P53223 239 aa3.81□□□□□ -1.8
CTR3YLR411W YNL190WP53872 204 aa3.81□□□□□ -1.8
CTR3YLR411W PBI2P0CT04 75 aaKnown RBP3.8□□□□□ -1.8
CTR3YLR411W YHL042WP38729 150 aa3.8□□□□□ -1.8
CTR3YLR411W ERI1P62651 68 aaKnown RBP3.8□□□□□ -1.8
CTR3YLR411W YPL080CQ02826 108 aa3.8□□□□□ -1.8
CTR3YLR411W ENV10Q99382 181 aa3.8□□□□□ -1.8
CTR3YLR411W CSF1Q12150 2958 aa3.8□□□□□ -1.8
CTR3YLR411W YLR236CA0A023PZG4 107 aa3.79□□□□□ -1.8
CTR3YLR411W YHR139C-AO13536 103 aa3.79□□□□□ -1.8
CTR3YLR411W MID2P36027 376 aa3.79□□□□□ -1.8
CTR3YLR411W MPC2P38857 129 aa3.79□□□□□ -1.8
CTR3YLR411W YPS5P53057 165 aa3.79□□□□□ -1.8
CTR3YLR411W YMR122W-AQ3E842 84 aa3.79□□□□□ -1.8
CTR3YLR411W YBR209WP38311 105 aa3.78□□□□□ -1.8
CTR3YLR411W ARC15P40518 154 aaRIP-Chip data3.78□□□□□ -1.8not detected
CTR3YLR411W YIL059CP40520 121 aa3.78□□□□□ -1.8
CTR3YLR411W YDL241WQ07738 123 aa3.78□□□□□ -1.8
CTR3YLR411W YDR119W-AQ2V2P9 66 aa3.78□□□□□ -1.8
CTR3YLR411W YGR240C-AQ3E786 66 aa3.78□□□□□ -1.8
CTR3YLR411W Q0297Q9ZZV8 51 aa3.78□□□□□ -1.8
CTR3YLR411W YMR295CQ03559 197 aa3.77□□□□□ -1.81
CTR3YLR411W EMC6Q12431 108 aa3.77□□□□□ -1.81
CTR3YLR411W YPL038W-AQ3E7B4 63 aa3.77□□□□□ -1.81
CTR3YLR411W SMP1P38128 452 aa3.76□□□□□ -1.81
CTR3YLR411W ERG28P40030 148 aa3.76□□□□□ -1.81
CTR3YLR411W YFR035CP43608 114 aa3.76□□□□□ -1.81
CTR3YLR411W COF1Q03048 143 aaKnown RBP3.76□□□□□ -1.81
CTR3YLR411W VAM10Q08474 114 aa3.76□□□□□ -1.81
CTR3YLR411W YMR175W-AQ3E766 64 aa3.76□□□□□ -1.81
CTR3YLR411W TAR1Q8TGM6 124 aa3.76□□□□□ -1.81
CTR3YLR411W RPL29P05747 59 aaPredicted RBP3.75□□□□□ -1.81
CTR3YLR411W TOM6P33448 61 aa3.75□□□□□ -1.81
CTR3YLR411W YGL088WP53151 121 aa3.75□□□□□ -1.81
CTR3YLR411W YGR039WP53225 103 aa3.75□□□□□ -1.81
CTR3YLR411W RPB9P27999 122 aa3.74□□□□□ -1.81
CTR3YLR411W YSY6P38374 65 aa3.74□□□□□ -1.81
CTR3YLR411W GAT4P40569 121 aa3.74□□□□□ -1.81
CTR3YLR411W RDS3Q06835 107 aaPredicted RBP3.74□□□□□ -1.81
CTR3YLR411W YPR010C-AA5Z2X5 72 aa3.73□□□□□ -1.81
CTR3YLR411W YJR107C-AP0CT86 78 aa3.73□□□□□ -1.81
CTR3YLR411W YBR219CP38317 127 aa3.73□□□□□ -1.81
CTR3YLR411W ICY1Q04329 127 aa3.73□□□□□ -1.81
CTR3YLR411W YDL012CQ12489 107 aa3.73□□□□□ -1.81
CTR3YLR411W YLL006W-AQ3E814 58 aa3.73□□□□□ -1.81
CTR3YLR411W YAL065CO13511 128 aa3.72□□□□□ -1.81
CTR3YLR411W KNH1P50112 268 aa3.72□□□□□ -1.81
CTR3YLR411W RSM19P53733 91 aaPredicted RBP3.72□□□□□ -1.81
CTR3YLR411W IRC21Q04772 201 aa3.72□□□□□ -1.81
CTR3YLR411W YPL229WQ99395 206 aa3.72□□□□□ -1.81
CTR3YLR411W YHR212W-AP0CX91 67 aa3.71□□□□□ -1.82
CTR3YLR411W IRA2P19158 3079 aa3.71□□□□□ -1.82
CTR3YLR411W ECM12O13529 151 aa3.7□□□□□ -1.82
CTR3YLR411W RPC10P40422 70 aa3.7□□□□□ -1.82
CTR3YLR411W YDR274CP87283 123 aa3.7□□□□□ -1.82
CTR3YLR411W IRA1P18963 3092 aa3.69□□□□□ -1.82
CTR3YLR411W IGD1P43598 195 aa3.69□□□□□ -1.82
CTR3YLR411W SFT1P43682 97 aa3.69□□□□□ -1.82
CTR3YLR411W ATP18P81450 59 aa3.69□□□□□ -1.82
CTR3YLR411W BPH1P25356 2167 aa3.68□□□□□ -1.82
CTR3YLR411W YDR029WQ12111 104 aa3.68□□□□□ -1.82
CTR3YLR411W YKL183C-AQ3E765 70 aa3.68□□□□□ -1.82
CTR3YLR411W TSC3Q3E790 80 aa3.68□□□□□ -1.82
CTR3YLR411W TOR2P32600 2474 aaKnown RBP3.68□□□□□ -1.82
CTR3YLR411W YBR056W-AI2HB52 66 aa3.67□□□□□ -1.82
CTR3YLR411W RPL26AP05743 127 aaKnown RBP3.67□□□□□ -1.82
CTR3YLR411W YHL018WP38744 120 aaPredicted RBP3.67□□□□□ -1.82
CTR3YLR411W MVB12P42939 101 aa3.67□□□□□ -1.82
CTR3YLR411W RPL26BP53221 127 aaKnown RBP3.67□□□□□ -1.82
CTR3YLR411W YLR361C-AQ3E795 98 aa3.67□□□□□ -1.82
CTR3YLR411W UBC4P15731 148 aa3.66□□□□□ -1.82
CTR3YLR411W YOR034C-AQ3E735 80 aa3.66□□□□□ -1.82
CTR3YLR411W YLR285C-AQ3E771 56 aa3.66□□□□□ -1.82
CTR3YLR411W YBL039W-BP0C268 59 aa3.65□□□□□ -1.83
CTR3YLR411W YFL019CP43576 117 aa3.65□□□□□ -1.83
CTR3YLR411W MPC3P53311 146 aa3.65□□□□□ -1.83
CTR3YLR411W YBL112CQ3E7Y4 105 aa3.65□□□□□ -1.83
CTR3YLR411W GCN1P33892 2672 aaKnown RBP3.65□□□□□ -1.83
CTR3YLR411W RPL33AP05744 107 aaKnown RBP3.64□□□□□ -1.83
CTR3YLR411W RPL33BP41056 107 aaKnown RBP3.64□□□□□ -1.83
CTR3YLR411W SPC1P46965 94 aa3.64□□□□□ -1.83
CTR3YLR411W SGF11Q03067 99 aa3.64□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 80.7 ms