RNA–Protein interactions for RNA: YLR207W

HRD3, Transcript of ER membrane protein that plays a central role in ERAD, yeastyeast

Gene HRD3, Length 2,502 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HRD3YLR207W YJR146WP47174 117 aa1.61□□□□□ -2.15
HRD3YLR207W THG1P53215 237 aaKnown RBP1.61□□□□□ -2.15
HRD3YLR207W DAD3P69850 94 aa1.61□□□□□ -2.15
HRD3YLR207W YPR145C-AQ2V2P0 78 aa1.61□□□□□ -2.15
HRD3YLR207W YGL010WP25338 174 aa1.6□□□□□ -2.15
HRD3YLR207W YFR035CP43608 114 aa1.6□□□□□ -2.15
HRD3YLR207W FIT2Q08906 153 aa1.6□□□□□ -2.15
HRD3YLR207W PRM3Q08931 133 aa1.6□□□□□ -2.15
HRD3YLR207W SCS22Q6Q595 175 aa1.6□□□□□ -2.15
HRD3YLR207W SEC11P15367 167 aa1.6□□□□□ -2.15
HRD3YLR207W ATG8P38182 117 aaRIP-Chip data1.6□□□□□ -2.15not detected
HRD3YLR207W VMA21P41806 77 aa1.6□□□□□ -2.15
HRD3YLR207W KNH1P50112 268 aa1.6□□□□□ -2.15
HRD3YLR207W DAD4P69851 72 aa1.6□□□□□ -2.15
HRD3YLR207W YDL157CQ12082 118 aa1.6□□□□□ -2.15
HRD3YLR207W YHR022CP38763 256 aa1.59□□□□□ -2.15
HRD3YLR207W YGR164WP53291 111 aa1.59□□□□□ -2.15
HRD3YLR207W CYT2Q00873 224 aa1.59□□□□□ -2.15
HRD3YLR207W COX8P04039 78 aa1.59□□□□□ -2.16
HRD3YLR207W YCR001WP25347 104 aa1.59□□□□□ -2.16
HRD3YLR207W SVP26P38869 228 aa1.59□□□□□ -2.16
HRD3YLR207W YDL241WQ07738 123 aa1.59□□□□□ -2.16
HRD3YLR207W DAD1Q12248 94 aa1.59□□□□□ -2.16
HRD3YLR207W YNR034W-AQ3E841 98 aa1.59□□□□□ -2.16
HRD3YLR207W YCL001W-BQ96VH2 84 aa1.59□□□□□ -2.16
HRD3YLR207W YBR013CP38215 129 aa1.58□□□□□ -2.16
HRD3YLR207W YHR173CP38864 112 aa1.58□□□□□ -2.16
HRD3YLR207W SNF11P38956 169 aa1.58□□□□□ -2.16
HRD3YLR207W DAN1P47178 298 aa1.58□□□□□ -2.16
HRD3YLR207W SOM1Q05676 74 aa1.58□□□□□ -2.16
HRD3YLR207W YLR042CQ07990 161 aa1.58□□□□□ -2.16
HRD3YLR207W MDN1Q12019 4910 aaKnown RBP1.58□□□□□ -2.16
HRD3YLR207W INO4P13902 151 aa1.58□□□□□ -2.16
HRD3YLR207W FPR2P32472 135 aa1.58□□□□□ -2.16
HRD3YLR207W SDH4P37298 181 aa1.58□□□□□ -2.16
HRD3YLR207W EMC6Q12431 108 aa1.58□□□□□ -2.16
HRD3YLR207W VAR1P02381 398 aa1.57□□□□□ -2.16
HRD3YLR207W MRPL44P19956 98 aa1.57□□□□□ -2.16
HRD3YLR207W YAL064WP39711 94 aa1.57□□□□□ -2.16
HRD3YLR207W YJL144WP47009 104 aa1.57□□□□□ -2.16
HRD3YLR207W ZEO1Q08245 113 aa1.57□□□□□ -2.16
HRD3YLR207W YHL042WP38729 150 aa1.57□□□□□ -2.16
HRD3YLR207W YHL018WP38744 120 aaPredicted RBP1.57□□□□□ -2.16
HRD3YLR207W POP3P53833 195 aaPredicted RBP1.57□□□□□ -2.16
HRD3YLR207W SEN15Q04675 128 aa1.57□□□□□ -2.16
HRD3YLR207W YHR007C-AQ07074 71 aa1.57□□□□□ -2.16
HRD3YLR207W YOR105WQ08504 108 aa1.57□□□□□ -2.16
HRD3YLR207W QCR10P37299 77 aa1.56□□□□□ -2.16
HRD3YLR207W MPC2P38857 129 aa1.56□□□□□ -2.16
HRD3YLR207W YPR153WQ06537 140 aa1.56□□□□□ -2.16
HRD3YLR207W RPS22AP0C0W1 130 aaKnown RBP1.56□□□□□ -2.16
HRD3YLR207W MRPL31P14063 131 aaPredicted RBP1.56□□□□□ -2.16
HRD3YLR207W SEC59P20048 519 aa1.56□□□□□ -2.16
HRD3YLR207W CYB5P40312 120 aa1.56□□□□□ -2.16
HRD3YLR207W YDL012CQ12489 107 aa1.56□□□□□ -2.16
HRD3YLR207W HAP3P13434 144 aa1.55□□□□□ -2.16
HRD3YLR207W UBC5P15732 148 aa1.55□□□□□ -2.16
HRD3YLR207W AUA1P32450 94 aa1.55□□□□□ -2.16
HRD3YLR207W HSP10P38910 106 aa1.55□□□□□ -2.16
HRD3YLR207W YNL146C-AQ3E7Z1 64 aa1.55□□□□□ -2.16
HRD3YLR207W UTR5P32630 166 aa1.55□□□□□ -2.16
HRD3YLR207W DSE2P38844 325 aa1.55□□□□□ -2.16
HRD3YLR207W YAR029WP39549 74 aa1.55□□□□□ -2.16
HRD3YLR207W COX12Q01519 83 aa1.55□□□□□ -2.16
HRD3YLR207W FYV5P25585 152 aa1.54□□□□□ -2.16
HRD3YLR207W PAU5P43575 122 aa1.54□□□□□ -2.16
HRD3YLR207W HYP2P23301 157 aaKnown RBP1.54□□□□□ -2.16
HRD3YLR207W YBR200W-AQ3E755 54 aa1.54□□□□□ -2.16
HRD3YLR207W RPS11AP0CX47 156 aaKnown RBP1.53□□□□□ -2.16
HRD3YLR207W RPS11BP0CX48 156 aaKnown RBP1.53□□□□□ -2.16
HRD3YLR207W PRE1P22141 198 aaKnown RBP1.53□□□□□ -2.16
HRD3YLR207W YEL014CP39999 101 aa1.53□□□□□ -2.16
HRD3YLR207W PAU15P40585 124 aa1.53□□□□□ -2.16
HRD3YLR207W NAT5Q08689 176 aa1.53□□□□□ -2.16
HRD3YLR207W YOR376W-AQ3E805 51 aa1.53□□□□□ -2.16
HRD3YLR207W GTT1P40582 234 aa1.52□□□□□ -2.17
HRD3YLR207W BRP1P53194 125 aa1.52□□□□□ -2.17
HRD3YLR207W CCW12Q12127 133 aa1.52□□□□□ -2.17
HRD3YLR207W PAU21P0CE86 164 aa1.52□□□□□ -2.17
HRD3YLR207W PAU22P0CE87 164 aa1.52□□□□□ -2.17
HRD3YLR207W MRPL11P36521 249 aaPredicted RBP1.52□□□□□ -2.17
HRD3YLR207W PAU7P39545 55 aa1.52□□□□□ -2.17
HRD3YLR207W ERV14P53173 138 aa1.52□□□□□ -2.17
HRD3YLR207W YIL014C-AQ02598 104 aa1.52□□□□□ -2.17
HRD3YLR207W GPI19Q04082 140 aa1.52□□□□□ -2.17
HRD3YLR207W YMR103CQ04436 120 aa1.52□□□□□ -2.17
HRD3YLR207W YLR342W-AQ3E810 57 aa1.52□□□□□ -2.17
HRD3YLR207W PAU19P0CE85 124 aa1.51□□□□□ -2.17
HRD3YLR207W HMRA1P0CY11 126 aa1.51□□□□□ -2.17
HRD3YLR207W PAU3P25610 124 aa1.51□□□□□ -2.17
HRD3YLR207W SSS1P35179 80 aa1.51□□□□□ -2.17
HRD3YLR207W YKL044WP36092 106 aa1.51□□□□□ -2.17
HRD3YLR207W RRT15Q3E811 62 aa1.51□□□□□ -2.17
HRD3YLR207W YIL134C-AQ45U18 67 aa1.51□□□□□ -2.17
HRD3YLR207W DCV1P43595 202 aa1.51□□□□□ -2.17
HRD3YLR207W SGF11Q03067 99 aa1.51□□□□□ -2.17
HRD3YLR207W HMRA2P0CY13 119 aa1.5□□□□□ -2.17
HRD3YLR207W VAM10Q08474 114 aa1.5□□□□□ -2.17
HRD3YLR207W TDA2P40045 126 aa1.49□□□□□ -2.17
HRD3YLR207W SPI1P40092 148 aa1.49□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 59.2 ms