RNA–Protein interactions for RNA: YLR115W

CFT2, Transcript of Subunit of the mRNA cleavage and polyadenlylation factor (CPF), yeastyeast

Gene CFT2, Length 2,580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CFT2YLR115W PRM7Q12459 698 aa1.28□□□□□ -2.2
CFT2YLR115W RPL26AP05743 127 aaKnown RBP1.28□□□□□ -2.2
CFT2YLR115W MRP17P28778 131 aa1.28□□□□□ -2.2
CFT2YLR115W HSP150P32478 413 aa1.28□□□□□ -2.2
CFT2YLR115W PAU2P32612 120 aa1.28□□□□□ -2.2
CFT2YLR115W SRX1P36077 127 aa1.28□□□□□ -2.2
CFT2YLR115W YBR027CP38220 110 aa1.28□□□□□ -2.2
CFT2YLR115W CWP2P43497 92 aa1.28□□□□□ -2.2
CFT2YLR115W YJL144WP47009 104 aa1.28□□□□□ -2.2
CFT2YLR115W YGL149WP53116 101 aa1.28□□□□□ -2.2
CFT2YLR115W RPL26BP53221 127 aaKnown RBP1.28□□□□□ -2.2
CFT2YLR115W RDS3Q06835 107 aaPredicted RBP1.28□□□□□ -2.2
CFT2YLR115W VAM10Q08474 114 aa1.28□□□□□ -2.2
CFT2YLR115W YFR010W-AP0C5N0 62 aa1.27□□□□□ -2.21
CFT2YLR115W LSM2P38203 95 aaKnown RBP1.27□□□□□ -2.21
CFT2YLR115W POR2P40478 281 aa1.27□□□□□ -2.21
CFT2YLR115W DAD4P69851 72 aa1.27□□□□□ -2.21
CFT2YLR115W AVO2Q04749 426 aa1.27□□□□□ -2.21
CFT2YLR115W YMR321CQ04898 105 aa1.27□□□□□ -2.21
CFT2YLR115W FIT2Q08906 153 aa1.27□□□□□ -2.21
CFT2YLR115W YDR119W-AQ2V2P9 66 aa1.27□□□□□ -2.21
CFT2YLR115W YIL046W-AQ3E7Z4 54 aa1.27□□□□□ -2.21
CFT2YLR115W PCC1Q3E833 88 aa1.27□□□□□ -2.21
CFT2YLR115W MHF1Q3E835 90 aa1.27□□□□□ -2.21
CFT2YLR115W PAU12P53343 120 aa1.27□□□□□ -2.21
CFT2YLR115W ICY1Q04329 127 aa1.27□□□□□ -2.21
CFT2YLR115W PAU23Q07987 124 aa1.27□□□□□ -2.21
CFT2YLR115W HRT1Q08273 121 aa1.27□□□□□ -2.21
CFT2YLR115W PAU17Q12370 124 aa1.27□□□□□ -2.21
CFT2YLR115W YOR343CQ12484 108 aa1.27□□□□□ -2.21
CFT2YLR115W POL2P21951 2222 aaKnown RBP1.27□□□□□ -2.21
CFT2YLR115W QCR8P08525 94 aa1.26□□□□□ -2.21
CFT2YLR115W PAU19P0CE85 124 aa1.26□□□□□ -2.21
CFT2YLR115W PAU3P25610 124 aa1.26□□□□□ -2.21
CFT2YLR115W ATG8P38182 117 aaRIP-Chip data1.26□□□□□ -2.21not detected
CFT2YLR115W CYT2Q00873 224 aa1.26□□□□□ -2.21
CFT2YLR115W VPS68Q12016 184 aa1.26□□□□□ -2.21
CFT2YLR115W RPL22AP05749 121 aaKnown RBP1.26□□□□□ -2.21
CFT2YLR115W PAU24P38155 120 aa1.26□□□□□ -2.21
CFT2YLR115W IMP2P46972 177 aa1.26□□□□□ -2.21
CFT2YLR115W COX12Q01519 83 aa1.26□□□□□ -2.21
CFT2YLR115W HPA2Q06592 156 aa1.26□□□□□ -2.21
CFT2YLR115W YDR381C-AQ3E6R5 114 aa1.26□□□□□ -2.21
CFT2YLR115W RRT15Q3E811 62 aa1.26□□□□□ -2.21
CFT2YLR115W MHF2Q3E829 80 aa1.26□□□□□ -2.21
CFT2YLR115W TRA1P38811 3744 aa1.26□□□□□ -2.21
CFT2YLR115W ICS3P47034 131 aa1.25□□□□□ -2.21
CFT2YLR115W MIC27P50945 234 aa1.25□□□□□ -2.21
CFT2YLR115W YKL065W-AQ2V2P2 73 aa1.25□□□□□ -2.21
CFT2YLR115W YPL038W-AQ3E7B4 63 aa1.25□□□□□ -2.21
CFT2YLR115W SSS1P35179 80 aa1.25□□□□□ -2.21
CFT2YLR115W PAU16P35994 123 aa1.25□□□□□ -2.21
CFT2YLR115W PAU15P40585 124 aa1.25□□□□□ -2.21
CFT2YLR115W SED1Q01589 338 aa1.25□□□□□ -2.21
CFT2YLR115W MIX17Q03667 156 aa1.25□□□□□ -2.21
CFT2YLR115W YFL041W-AQ3E817 63 aa1.25□□□□□ -2.21
CFT2YLR115W YHR214C-DP0CX93 97 aa1.24□□□□□ -2.21
CFT2YLR115W ROX3P25046 220 aa1.24□□□□□ -2.21
CFT2YLR115W ATX1P38636 73 aa1.24□□□□□ -2.21
CFT2YLR115W CMC4Q3E7A9 73 aa1.24□□□□□ -2.21
CFT2YLR115W UTR5P32630 166 aa1.24□□□□□ -2.21
CFT2YLR115W COX23P38824 151 aa1.24□□□□□ -2.21
CFT2YLR115W YLR194CQ05777 254 aa1.24□□□□□ -2.21
CFT2YLR115W CCW14O13547 238 aa1.23□□□□□ -2.21
CFT2YLR115W DSE2P38844 325 aa1.23□□□□□ -2.21
CFT2YLR115W YER084WP40057 128 aa1.23□□□□□ -2.21
CFT2YLR115W YOR314WQ12506 109 aa1.23□□□□□ -2.21
CFT2YLR115W YPR096CO13587 100 aa1.23□□□□□ -2.21
CFT2YLR115W LST8P41318 303 aa1.23□□□□□ -2.21
CFT2YLR115W VMA9Q3E7B6 73 aa1.23□□□□□ -2.21
CFT2YLR115W AGA2P32781 87 aa1.22□□□□□ -2.21
CFT2YLR115W YBR292CP38357 123 aa1.22□□□□□ -2.21
CFT2YLR115W YOL131WQ08270 108 aa1.22□□□□□ -2.21
CFT2YLR115W YAL065CO13511 128 aa1.22□□□□□ -2.21
CFT2YLR115W RPL33AP05744 107 aaKnown RBP1.22□□□□□ -2.21
CFT2YLR115W IRC21Q04772 201 aa1.22□□□□□ -2.21
CFT2YLR115W COA3Q3E7B2 85 aa1.22□□□□□ -2.21
CFT2YLR115W YGL014C-AP0C5N1 53 aa1.21□□□□□ -2.22
CFT2YLR115W YBR219CP38317 127 aa1.21□□□□□ -2.22
CFT2YLR115W VPS55P47111 140 aa1.21□□□□□ -2.22
CFT2YLR115W YJR146WP47174 117 aa1.21□□□□□ -2.22
CFT2YLR115W MRX7P53869 86 aa1.21□□□□□ -2.22
CFT2YLR115W LSM6Q06406 86 aaKnown RBP1.21□□□□□ -2.22
CFT2YLR115W YCR095W-AQ3E787 52 aa1.21□□□□□ -2.22
CFT2YLR115W FPR1P20081 114 aaKnown RBP1.21□□□□□ -2.22
CFT2YLR115W AIM19P40502 157 aa1.2□□□□□ -2.22
CFT2YLR115W PAU5P43575 122 aa1.2□□□□□ -2.22
CFT2YLR115W SNA2P56508 79 aa1.2□□□□□ -2.22
CFT2YLR115W YMR122CQ03879 124 aa1.2□□□□□ -2.22
CFT2YLR115W YOR105WQ08504 108 aa1.2□□□□□ -2.22
CFT2YLR115W YGL041C-BQ3E750 60 aa1.2□□□□□ -2.22
CFT2YLR115W SPI1P40092 148 aa1.2□□□□□ -2.22
CFT2YLR115W YJL009WP47078 108 aa1.2□□□□□ -2.22
CFT2YLR115W YIL102C-AQ2V2P5 75 aa1.2□□□□□ -2.22
CFT2YLR115W NHP2P32495 156 aaPredicted RBP1.19□□□□□ -2.22
CFT2YLR115W MRPL38P35996 138 aaPredicted RBP1.19□□□□□ -2.22
CFT2YLR115W YNL198CP40166 100 aa1.19□□□□□ -2.22
CFT2YLR115W YNR034W-AQ3E841 98 aa1.19□□□□□ -2.22
CFT2YLR115W YER188C-AP0C0V2 99 aa1.19□□□□□ -2.22
CFT2YLR115W RPS22AP0C0W1 130 aaKnown RBP1.19□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 26.2 ms