RNA–Protein interactions for RNA: YLR058C

SHM2, Transcript of Cytosolic serine hydroxymethyltransferase, yeastyeast

Gene SHM2, Length 1,410 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHM2YLR058C HAP3P13434 144 aa7.16□□□□□ -1.26
SHM2YLR058C GLC8P41818 229 aa7.15□□□□□ -1.27
SHM2YLR058C CWP2P43497 92 aa7.15□□□□□ -1.27
SHM2YLR058C ELC1Q03071 99 aa7.15□□□□□ -1.27
SHM2YLR058C YLR363W-AQ3E747 85 aa7.15□□□□□ -1.27
SHM2YLR058C LSO2Q3E772 92 aaKnown RBP7.15□□□□□ -1.27
SHM2YLR058C CDC43P18898 376 aa7.14□□□□□ -1.27
SHM2YLR058C SNA2P56508 79 aa7.14□□□□□ -1.27
SHM2YLR058C MID2P36027 376 aa7.13□□□□□ -1.27
SHM2YLR058C MRP10O75012 95 aa7.12□□□□□ -1.27
SHM2YLR058C YPL229WQ99395 206 aa7.12□□□□□ -1.27
SHM2YLR058C MBF1O14467 151 aaKnown RBP7.11□□□□□ -1.27
SHM2YLR058C YDR034C-AP0C289 58 aa7.11□□□□□ -1.27
SHM2YLR058C AQY2P0CD90 149 aa7.11□□□□□ -1.27
SHM2YLR058C YML079WQ03629 201 aa7.11□□□□□ -1.27
SHM2YLR058C SMD1Q02260 146 aaPredicted RBP7.1□□□□□ -1.27
SHM2YLR058C YDR029WQ12111 104 aa7.1□□□□□ -1.27
SHM2YLR058C YLL006W-AQ3E814 58 aa7.1□□□□□ -1.27
SHM2YLR058C UBC11P52492 156 aa7.1□□□□□ -1.27
SHM2YLR058C GAT4P40569 121 aa7.09□□□□□ -1.28
SHM2YLR058C ABF2Q02486 183 aa7.09□□□□□ -1.28
SHM2YLR058C SMP1P38128 452 aa7.08□□□□□ -1.28
SHM2YLR058C MVB12P42939 101 aa7.08□□□□□ -1.28
SHM2YLR058C LCL2Q08045 131 aa7.08□□□□□ -1.28
SHM2YLR058C CWC27Q02770 301 aa7.07□□□□□ -1.28
SHM2YLR058C YER181CP40097 107 aa7.05□□□□□ -1.28
SHM2YLR058C STF1P01098 86 aa7.04□□□□□ -1.28
SHM2YLR058C YIA6P40556 373 aa7.04□□□□□ -1.28
SHM2YLR058C YFL019CP43576 117 aa7.04□□□□□ -1.28
SHM2YLR058C HPA2Q06592 156 aa7.04□□□□□ -1.28
SHM2YLR058C YBL039W-BP0C268 59 aa7.03□□□□□ -1.28
SHM2YLR058C RGM1Q00453 211 aa7.03□□□□□ -1.28
SHM2YLR058C YLR296WQ05898 108 aa7.03□□□□□ -1.28
SHM2YLR058C PAI3P01094 68 aa7.02□□□□□ -1.29
SHM2YLR058C RPL29P05747 59 aaPredicted RBP7.02□□□□□ -1.29
SHM2YLR058C YKL023C-AQ2V2P3 75 aa7.02□□□□□ -1.29
SHM2YLR058C PEX22P39718 180 aa7.01□□□□□ -1.29
SHM2YLR058C YOR020W-AQ3E824 90 aa7.01□□□□□ -1.29
SHM2YLR058C IGD1P43598 195 aa7.01□□□□□ -1.29
SHM2YLR058C MHR1Q06630 226 aa7.01□□□□□ -1.29
SHM2YLR058C YGL041C-BQ3E750 60 aa7.01□□□□□ -1.29
SHM2YLR058C CPR1P14832 162 aaKnown RBP7□□□□□ -1.29
SHM2YLR058C AIM19P40502 157 aa7□□□□□ -1.29
SHM2YLR058C ECM12O13529 151 aa6.99□□□□□ -1.29
SHM2YLR058C ARO2P28777 376 aaKnown RBP6.99□□□□□ -1.29
SHM2YLR058C YHR130CP38834 111 aa6.99□□□□□ -1.29
SHM2YLR058C Q0032Q9ZZX7 96 aa6.99□□□□□ -1.29
SHM2YLR058C KNH1P50112 268 aa6.98□□□□□ -1.29
SHM2YLR058C POP7P38291 140 aa6.97□□□□□ -1.29
SHM2YLR058C LSM6Q06406 86 aaKnown RBP6.97□□□□□ -1.29
SHM2YLR058C YIL102C-AQ2V2P5 75 aa6.97□□□□□ -1.29
SHM2YLR058C YPR170W-BP0C5R9 85 aa6.96□□□□□ -1.3
SHM2YLR058C COX10P21592 462 aa6.96□□□□□ -1.3
SHM2YLR058C EOS1P53938 366 aa6.96□□□□□ -1.3
SHM2YLR058C NHP2P32495 156 aaPredicted RBP6.95□□□□□ -1.3
SHM2YLR058C IRC21Q04772 201 aa6.95□□□□□ -1.3
SHM2YLR058C UBC4P15731 148 aa6.94□□□□□ -1.3
SHM2YLR058C UIP3P39547 235 aa6.94□□□□□ -1.3
SHM2YLR058C YNL162W-AQ3E7A8 72 aa6.94□□□□□ -1.3
SHM2YLR058C YNL198CP40166 100 aa6.93□□□□□ -1.3
SHM2YLR058C ICY1Q04329 127 aa6.93□□□□□ -1.3
SHM2YLR058C YLR307C-AQ3E825 87 aa6.93□□□□□ -1.3
SHM2YLR058C MET32Q12041 191 aa6.92□□□□□ -1.3
SHM2YLR058C YOR034C-AQ3E735 80 aa6.92□□□□□ -1.3
SHM2YLR058C GIS2P53849 153 aaKnown RBP RIP-Chip data6.9□□□□□ -1.31not detected
SHM2YLR058C YGL193CP53097 103 aa6.89□□□□□ -1.31
SHM2YLR058C MRPL24P36525 258 aaPredicted RBP6.88□□□□□ -1.31
SHM2YLR058C LCL1Q02786 101 aa6.88□□□□□ -1.31
SHM2YLR058C ISU2Q12056 156 aa6.88□□□□□ -1.31
SHM2YLR058C RPL26AP05743 127 aaKnown RBP6.87□□□□□ -1.31
SHM2YLR058C HUR1P45820 110 aa6.87□□□□□ -1.31
SHM2YLR058C RPL26BP53221 127 aaKnown RBP6.87□□□□□ -1.31
SHM2YLR058C YLR236CA0A023PZG4 107 aa6.84□□□□□ -1.31
SHM2YLR058C HYP2P23301 157 aaKnown RBP6.84□□□□□ -1.31
SHM2YLR058C YBR230W-AQ3E762 66 aa6.84□□□□□ -1.31
SHM2YLR058C TMA7Q3E764 64 aaKnown RBP6.84□□□□□ -1.31
SHM2YLR058C YNL042W-BQ3E7Z2 85 aa6.84□□□□□ -1.32
SHM2YLR058C YPL257WQ08974 193 aa6.82□□□□□ -1.32
SHM2YLR058C YJL127C-BQ3E828 52 aa6.82□□□□□ -1.32
SHM2YLR058C MSA2P36157 363 aa6.81□□□□□ -1.32
SHM2YLR058C MMS2P53152 137 aa6.81□□□□□ -1.32
SHM2YLR058C FYV5P25585 152 aa6.8□□□□□ -1.32
SHM2YLR058C MPC3P53311 146 aa6.79□□□□□ -1.32
SHM2YLR058C YER039C-AP0CD97 72 aa6.77□□□□□ -1.33
SHM2YLR058C YLR156WP0CE96 114 aa6.77□□□□□ -1.33
SHM2YLR058C YLR159WP0CE97 114 aa6.77□□□□□ -1.33
SHM2YLR058C YLR161WP0CE98 114 aa6.77□□□□□ -1.33
SHM2YLR058C SPT4P32914 102 aaPredicted RBP6.77□□□□□ -1.33
SHM2YLR058C DDR2P89113 61 aa6.77□□□□□ -1.33
SHM2YLR058C DUT1P33317 147 aa6.75□□□□□ -1.33
SHM2YLR058C DSE2P38844 325 aa6.73□□□□□ -1.33
SHM2YLR058C YBL112CQ3E7Y4 105 aa6.72□□□□□ -1.33
SHM2YLR058C SAP30P38429 201 aa6.71□□□□□ -1.34
SHM2YLR058C YLR415CO13578 112 aa6.69□□□□□ -1.34
SHM2YLR058C YJR107C-AP0CT86 78 aa6.69□□□□□ -1.34
SHM2YLR058C DDR48P18899 430 aaKnown RBP6.69□□□□□ -1.34
SHM2YLR058C BET1P22804 142 aa6.69□□□□□ -1.34
SHM2YLR058C EDC2P40023 145 aaPredicted RBP6.69□□□□□ -1.34
SHM2YLR058C BSC4P53841 131 aa6.69□□□□□ -1.34
SHM2YLR058C SFT1P43682 97 aa6.68□□□□□ -1.34
Retrieved 100 of 5,963 RNA–protein pairs in 429.4 ms