RNA–Protein interactions for RNA: YLR022C

SDO1, Transcript of Guanine nucleotide exchange factor (GEF) for Ria1p, yeastyeast

Gene SDO1, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDO1YLR022C SNA2P56508 79 aa1.8□□□□□ -2.12
SDO1YLR022C KEI1Q06346 221 aa1.8□□□□□ -2.12
SDO1YLR022C YDL157CQ12082 118 aa1.8□□□□□ -2.12
SDO1YLR022C POC4Q12245 148 aaPredicted RBP1.8□□□□□ -2.12
SDO1YLR022C FYV7Q12247 151 aa1.8□□□□□ -2.12
SDO1YLR022C COX8P04039 78 aa1.79□□□□□ -2.12
SDO1YLR022C GSP1P32835 219 aaKnown RBP1.79□□□□□ -2.12
SDO1YLR022C YKR070WP36151 352 aaKnown RBP1.79□□□□□ -2.12
SDO1YLR022C YPL225WQ08971 146 aaKnown RBP1.79□□□□□ -2.12
SDO1YLR022C RPS25BP0C0T4 108 aaKnown RBP1.78□□□□□ -2.12
SDO1YLR022C MRPL44P19956 98 aa1.78□□□□□ -2.12
SDO1YLR022C YCR050CP25630 102 aa1.78□□□□□ -2.12
SDO1YLR022C LSM2P38203 95 aaKnown RBP1.78□□□□□ -2.12
SDO1YLR022C YEL067CP39978 195 aa1.78□□□□□ -2.12
SDO1YLR022C RPS25AQ3E792 108 aaPredicted RBP1.78□□□□□ -2.12
SDO1YLR022C UTP11P34247 250 aaPredicted RBP1.77□□□□□ -2.13
SDO1YLR022C YHL018WP38744 120 aaPredicted RBP1.77□□□□□ -2.13
SDO1YLR022C CWC27Q02770 301 aa1.77□□□□□ -2.13
SDO1YLR022C MRP17P28778 131 aa1.76□□□□□ -2.13
SDO1YLR022C BRP1P53194 125 aa1.76□□□□□ -2.13
SDO1YLR022C SOM1Q05676 74 aa1.76□□□□□ -2.13
SDO1YLR022C YDL241WQ07738 123 aa1.76□□□□□ -2.13
SDO1YLR022C UBC4P15731 148 aa1.75□□□□□ -2.13
SDO1YLR022C YHL042WP38729 150 aa1.75□□□□□ -2.13
SDO1YLR022C YLR194CQ05777 254 aa1.75□□□□□ -2.13
SDO1YLR022C NAT5Q08689 176 aa1.75□□□□□ -2.13
SDO1YLR022C YOR385WQ08909 290 aa1.75□□□□□ -2.13
SDO1YLR022C YMR122W-AQ3E842 84 aa1.75□□□□□ -2.13
SDO1YLR022C QCR10P37299 77 aa1.74□□□□□ -2.13
SDO1YLR022C YAL064WP39711 94 aa1.74□□□□□ -2.13
SDO1YLR022C HPA3P39979 161 aa1.74□□□□□ -2.13
SDO1YLR022C SPI1P40092 148 aa1.74□□□□□ -2.13
SDO1YLR022C MIC27P50945 234 aa1.74□□□□□ -2.13
SDO1YLR022C YGL230CP53074 147 aa1.74□□□□□ -2.13
SDO1YLR022C YCL001W-AP87012 153 aa1.74□□□□□ -2.13
SDO1YLR022C FIT2Q08906 153 aa1.74□□□□□ -2.13
SDO1YLR022C HSP10P38910 106 aa1.73□□□□□ -2.13
SDO1YLR022C RPL37BP51402 88 aaKnown RBP1.73□□□□□ -2.13
SDO1YLR022C PMP3P87284 55 aa1.73□□□□□ -2.13
SDO1YLR022C YPR153WQ06537 140 aa1.73□□□□□ -2.13
SDO1YLR022C ZEO1Q08245 113 aa1.73□□□□□ -2.13
SDO1YLR022C YER039C-AP0CD97 72 aa1.72□□□□□ -2.13
SDO1YLR022C SEC59P20048 519 aa1.72□□□□□ -2.13
SDO1YLR022C FYV5P25585 152 aa1.72□□□□□ -2.13
SDO1YLR022C ERV14P53173 138 aa1.72□□□□□ -2.13
SDO1YLR022C YGR164WP53291 111 aa1.72□□□□□ -2.13
SDO1YLR022C YBR200W-AQ3E755 54 aa1.72□□□□□ -2.13
SDO1YLR022C ECM12O13529 151 aa1.71□□□□□ -2.14
SDO1YLR022C HAP3P13434 144 aa1.71□□□□□ -2.14
SDO1YLR022C PRE1P22141 198 aaKnown RBP1.71□□□□□ -2.14
SDO1YLR022C YEL014CP39999 101 aa1.71□□□□□ -2.14
SDO1YLR022C GPI19Q04082 140 aa1.71□□□□□ -2.14
SDO1YLR022C YMR090WQ04304 227 aaKnown RBP1.71□□□□□ -2.14
SDO1YLR022C PCC1Q3E833 88 aa1.71□□□□□ -2.14
SDO1YLR022C MED11Q99278 115 aa1.71□□□□□ -2.14
SDO1YLR022C PAU21P0CE86 164 aa1.7□□□□□ -2.14
SDO1YLR022C PAU22P0CE87 164 aa1.7□□□□□ -2.14
SDO1YLR022C UBC5P15732 148 aa1.7□□□□□ -2.14
SDO1YLR022C YAR029WP39549 74 aa1.7□□□□□ -2.14
SDO1YLR022C RPL13BP40212 199 aaKnown RBP1.7□□□□□ -2.14
SDO1YLR022C SWM2P40342 146 aa1.7□□□□□ -2.14
SDO1YLR022C DAN1P47178 298 aa1.7□□□□□ -2.14
SDO1YLR022C RPL13AQ12690 199 aaPredicted RBP1.7□□□□□ -2.14
SDO1YLR022C YKL044WP36092 106 aa1.69□□□□□ -2.14
SDO1YLR022C YBR090CP38253 122 aa1.69□□□□□ -2.14
SDO1YLR022C TDA2P40045 126 aa1.69□□□□□ -2.14
SDO1YLR022C RPS29AP41057 56 aaKnown RBP1.69□□□□□ -2.14
SDO1YLR022C DCV1P43595 202 aa1.69□□□□□ -2.14
SDO1YLR022C RGM1Q00453 211 aa1.69□□□□□ -2.14
SDO1YLR022C YGL041C-BQ3E750 60 aa1.69□□□□□ -2.14
SDO1YLR022C KSH1Q8TGJ3 72 aa1.69□□□□□ -2.14
SDO1YLR022C FUN14P18411 198 aa1.68□□□□□ -2.14
SDO1YLR022C YBR242WP38331 238 aa1.68□□□□□ -2.14
SDO1YLR022C COA2Q3E823 68 aa1.68□□□□□ -2.14
SDO1YLR022C RPL36BO14455 100 aaKnown RBP1.67□□□□□ -2.14
SDO1YLR022C RPL36AP05745 100 aaPredicted RBP1.67□□□□□ -2.14
SDO1YLR022C MRPL11P36521 249 aaPredicted RBP1.67□□□□□ -2.14
SDO1YLR022C YBR219CP38317 127 aa1.67□□□□□ -2.14
SDO1YLR022C YMR141CP40211 102 aa1.67□□□□□ -2.14
SDO1YLR022C RPC10P40422 70 aa1.67□□□□□ -2.14
SDO1YLR022C YOR376W-AQ3E805 51 aa1.67□□□□□ -2.14
SDO1YLR022C SUS1Q6WNK7 96 aa1.67□□□□□ -2.14
SDO1YLR022C QCR8P08525 94 aa1.66□□□□□ -2.14
SDO1YLR022C YIL163CP40448 117 aa1.66□□□□□ -2.14
SDO1YLR022C GTT1P40582 234 aa1.66□□□□□ -2.14
SDO1YLR022C YMR103CQ04436 120 aa1.66□□□□□ -2.14
SDO1YLR022C YLR162WQ06235 118 aa1.66□□□□□ -2.14
SDO1YLR022C YLR342W-AQ3E810 57 aa1.66□□□□□ -2.14
SDO1YLR022C YCL001W-BQ96VH2 84 aa1.66□□□□□ -2.14
SDO1YLR022C YEA6P39953 335 aa1.65□□□□□ -2.15
SDO1YLR022C HUA1P40325 198 aa1.65□□□□□ -2.15
SDO1YLR022C YMR007WQ03675 126 aa1.65□□□□□ -2.15
SDO1YLR022C AVO2Q04749 426 aa1.65□□□□□ -2.15
SDO1YLR022C DAD1Q12248 94 aa1.65□□□□□ -2.15
SDO1YLR022C YHR086W-AQ3E746 53 aa1.65□□□□□ -2.15
SDO1YLR022C PFY1P07274 126 aa1.64□□□□□ -2.15
SDO1YLR022C VMA21P41806 77 aa1.64□□□□□ -2.15
SDO1YLR022C CWP2P43497 92 aa1.64□□□□□ -2.15
SDO1YLR022C YHR213W-AQ8TGT4 77 aa1.64□□□□□ -2.15
SDO1YLR022C YGL010WP25338 174 aa1.63□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 25.3 ms