RNA–Protein interactions for RNA: YKR086W

PRP16, Transcript of DEAH-box RNA helicase involved in second catalytic step of splicing and in exon ligation, yeast

Gene PRP16, Length 3,216 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PRP16	YKR086W	YAL064W	P39711	94 aa		0.36	□□□□□ -2.35
PRP16	YKR086W	ARL3	Q02804	198 aa		0.36	□□□□□ -2.35
PRP16	YKR086W	MHF2	Q3E829	80 aa		0.36	□□□□□ -2.35
PRP16	YKR086W	SEC11	P15367	167 aa		0.35	□□□□□ -2.35
PRP16	YKR086W	YER187W	P40102	141 aa		0.35	□□□□□ -2.35
PRP16	YKR086W	YFL019C	P43576	117 aa		0.35	□□□□□ -2.35
PRP16	YKR086W	VMA10	P48836	114 aa	Known RBP	0.35	□□□□□ -2.35
PRP16	YKR086W	YDL241W	Q07738	123 aa		0.35	□□□□□ -2.35
PRP16	YKR086W	RPS11A	P0CX47	156 aa	Known RBP	0.35	□□□□□ -2.35
PRP16	YKR086W	RPS11B	P0CX48	156 aa	Known RBP	0.35	□□□□□ -2.35
PRP16	YKR086W	YHR212W-A	P0CX91	67 aa		0.35	□□□□□ -2.35
PRP16	YKR086W	YEL008W	P40001	126 aa		0.35	□□□□□ -2.35
PRP16	YKR086W	HPM1	P40481	377 aa		0.35	□□□□□ -2.35
PRP16	YKR086W	AIM19	P40502	157 aa		0.35	□□□□□ -2.35
PRP16	YKR086W	RBL2	P48606	106 aa	Known RBP	0.35	□□□□□ -2.35
PRP16	YKR086W	THG1	P53215	237 aa	Known RBP	0.35	□□□□□ -2.35
PRP16	YKR086W	DYN2	Q02647	92 aa		0.35	□□□□□ -2.35
PRP16	YKR086W	YKL065W-A	Q2V2P2	73 aa		0.35	□□□□□ -2.35
PRP16	YKR086W	OST5	Q92316	86 aa		0.35	□□□□□ -2.35
PRP16	YKR086W	YER039C-A	P0CD97	72 aa		0.34	□□□□□ -2.35
PRP16	YKR086W	SFT1	P43682	97 aa		0.34	□□□□□ -2.35
PRP16	YKR086W	SKI6	P46948	246 aa	Predicted RBP	0.34	□□□□□ -2.35
PRP16	YKR086W	YDR010C	Q12426	110 aa		0.34	□□□□□ -2.35
PRP16	YKR086W	HSP12	P22943	109 aa	Known RBP	0.34	□□□□□ -2.36
PRP16	YKR086W	MPM1	P40364	252 aa		0.34	□□□□□ -2.36
PRP16	YKR086W	SAE3	P89114	91 aa		0.34	□□□□□ -2.36
PRP16	YKR086W	YDR210W	Q03482	75 aa		0.34	□□□□□ -2.36
PRP16	YKR086W	YLR194C	Q05777	254 aa		0.34	□□□□□ -2.36
PRP16	YKR086W	GPI11	Q06636	219 aa		0.34	□□□□□ -2.36
PRP16	YKR086W	CCW12	Q12127	133 aa		0.34	□□□□□ -2.36
PRP16	YKR086W	YMR175W-A	Q3E766	64 aa		0.34	□□□□□ -2.36
PRP16	YKR086W	YLL066W-B	Q8TGJ7	56 aa		0.34	□□□□□ -2.36
PRP16	YKR086W	SEC59	P20048	519 aa		0.34	□□□□□ -2.36
PRP16	YKR086W	COX23	P38824	151 aa		0.34	□□□□□ -2.36
PRP16	YKR086W	YEA6	P39953	335 aa		0.34	□□□□□ -2.36
PRP16	YKR086W	YGL149W	P53116	101 aa		0.34	□□□□□ -2.36
PRP16	YKR086W	YMR082C	Q04276	118 aa		0.34	□□□□□ -2.36
PRP16	YKR086W	YPL225W	Q08971	146 aa	Known RBP	0.34	□□□□□ -2.36
PRP16	YKR086W	ATP20	Q12233	115 aa		0.34	□□□□□ -2.36
PRP16	YKR086W	AVO2	Q04749	426 aa		0.33	□□□□□ -2.36
PRP16	YKR086W	CSI2	Q08054	341 aa		0.33	□□□□□ -2.36
PRP16	YKR086W	FCF2	Q12035	217 aa	Predicted RBP	0.33	□□□□□ -2.36
PRP16	YKR086W	YOL097W-A	Q3E7Y9	61 aa		0.33	□□□□□ -2.36
PRP16	YKR086W	YHR213W-B	Q8TGK1	99 aa		0.33	□□□□□ -2.36
PRP16	YKR086W	COX9	P07255	59 aa		0.32	□□□□□ -2.36
PRP16	YKR086W	FYV5	P25585	152 aa		0.32	□□□□□ -2.36
PRP16	YKR086W	TIM12	P32830	109 aa		0.32	□□□□□ -2.36
PRP16	YKR086W	SWM2	P40342	146 aa		0.32	□□□□□ -2.36
PRP16	YKR086W	DCV1	P43595	202 aa		0.32	□□□□□ -2.36
PRP16	YKR086W	COA4	Q05809	96 aa		0.32	□□□□□ -2.36
PRP16	YKR086W	YLR255C	O13574	117 aa		0.32	□□□□□ -2.36
PRP16	YKR086W	BUD23	P25627	275 aa	Predicted RBP	0.32	□□□□□ -2.36
PRP16	YKR086W	LSM2	P38203	95 aa	Known RBP	0.32	□□□□□ -2.36
PRP16	YKR086W	AIM4	P38305	123 aa	Predicted RBP	0.32	□□□□□ -2.36
PRP16	YKR086W	YHR138C	P38841	114 aa	Predicted RBP	0.32	□□□□□ -2.36
PRP16	YKR086W	YLR162W	Q06235	118 aa		0.32	□□□□□ -2.36
PRP16	YKR086W	SCS22	Q6Q595	175 aa		0.32	□□□□□ -2.36
PRP16	YKR086W	YHL042W	P38729	150 aa		0.32	□□□□□ -2.36
PRP16	YKR086W	YHL018W	P38744	120 aa	Predicted RBP	0.32	□□□□□ -2.36
PRP16	YKR086W	YFL065C	P43539	102 aa		0.32	□□□□□ -2.36
PRP16	YKR086W	YPR203W	Q08994	102 aa		0.32	□□□□□ -2.36
PRP16	YKR086W	YOR381W-A	Q3E804	55 aa		0.32	□□□□□ -2.36
PRP16	YKR086W	RPL33A	P05744	107 aa	Known RBP	0.31	□□□□□ -2.36
PRP16	YKR086W	HMRA2	P0CY13	119 aa		0.31	□□□□□ -2.36
PRP16	YKR086W	MRPL31	P14063	131 aa	Predicted RBP	0.31	□□□□□ -2.36
PRP16	YKR086W	EMC5	P40540	141 aa		0.31	□□□□□ -2.36
PRP16	YKR086W	YDR102C	Q03864	110 aa		0.31	□□□□□ -2.36
PRP16	YKR086W	SCP1	Q08873	200 aa		0.31	□□□□□ -2.36
PRP16	YKR086W	DDR48	P18899	430 aa	Known RBP	0.3	□□□□□ -2.36
PRP16	YKR086W	YCR001W	P25347	104 aa		0.3	□□□□□ -2.36
PRP16	YKR086W	EMP24	P32803	203 aa	Known RBP	0.3	□□□□□ -2.36
PRP16	YKR086W	DAD3	P69850	94 aa		0.3	□□□□□ -2.36
PRP16	YKR086W	YGL041C-B	Q3E750	60 aa		0.3	□□□□□ -2.36
PRP16	YKR086W	YKL018C-A	Q3E7A7	99 aa		0.3	□□□□□ -2.36
PRP16	YKR086W	SMX2	P40204	77 aa	Known RBP	0.3	□□□□□ -2.36
PRP16	YKR086W	CWC27	Q02770	301 aa		0.3	□□□□□ -2.36
PRP16	YKR086W	ELC1	Q03071	99 aa		0.3	□□□□□ -2.36
PRP16	YKR086W	YOL131W	Q08270	108 aa		0.3	□□□□□ -2.36
PRP16	YKR086W	YBR072C-A	Q3E794	53 aa		0.3	□□□□□ -2.36
PRP16	YKR086W	YLR307C-A	Q3E825	87 aa		0.3	□□□□□ -2.36
PRP16	YKR086W	RPL36B	O14455	100 aa	Known RBP	0.3	□□□□□ -2.36
PRP16	YKR086W	RPL39	P04650	51 aa		0.3	□□□□□ -2.36
PRP16	YKR086W	RPL36A	P05745	100 aa	Predicted RBP	0.3	□□□□□ -2.36
PRP16	YKR086W	MRP17	P28778	131 aa		0.3	□□□□□ -2.36
PRP16	YKR086W	HPA3	P39979	161 aa		0.3	□□□□□ -2.36
PRP16	YKR086W	YER181C	P40097	107 aa		0.3	□□□□□ -2.36
PRP16	YKR086W	DAD4	P69851	72 aa		0.3	□□□□□ -2.36
PRP16	YKR086W	YMR122C	Q03879	124 aa		0.3	□□□□□ -2.36
PRP16	YKR086W	YOR376W-A	Q3E805	51 aa		0.3	□□□□□ -2.36
PRP16	YKR086W	YLR365W	Q7LIF2	110 aa		0.3	□□□□□ -2.36
PRP16	YKR086W	TOM6	P33448	61 aa		0.29	□□□□□ -2.36
PRP16	YKR086W	YBR032W	P38223	100 aa		0.29	□□□□□ -2.36
PRP16	YKR086W	CSN9	Q03981	162 aa		0.29	□□□□□ -2.36
PRP16	YKR086W	YPR145C-A	Q2V2P0	78 aa		0.29	□□□□□ -2.36
PRP16	YKR086W	YGL258W-A	Q3E740	77 aa		0.29	□□□□□ -2.36
PRP16	YKR086W	RPB7	P34087	171 aa		0.29	□□□□□ -2.36
PRP16	YKR086W	PAU12	P53343	120 aa		0.29	□□□□□ -2.36
PRP16	YKR086W	YNL190W	P53872	204 aa		0.29	□□□□□ -2.36
PRP16	YKR086W	MED11	Q99278	115 aa		0.29	□□□□□ -2.36
PRP16	YKR086W	YGL010W	P25338	174 aa		0.28	□□□□□ -2.36

Retrieved 100 of 5,963 RNA–protein pairs in 84.4 ms