RNA–Protein interactions for RNA: YJR090C

GRR1, Transcript of F-box protein component of an SCF ubiquitin-ligase complex, yeast

Gene GRR1, Length 3,456 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GRR1	YJR090C	IRA2	P19158	3079 aa		0.9	□□□□□ -2.26
GRR1	YJR090C	YKL018C-A	Q3E7A7	99 aa		0.9	□□□□□ -2.26
GRR1	YJR090C	HUA1	P40325	198 aa		0.9	□□□□□ -2.27
GRR1	YJR090C	YFL065C	P43539	102 aa		0.9	□□□□□ -2.27
GRR1	YJR090C	PCC1	Q3E833	88 aa		0.9	□□□□□ -2.27
GRR1	YJR090C	YCL001W-B	Q96VH2	84 aa		0.9	□□□□□ -2.27
GRR1	YJR090C	YSF3	P0C074	85 aa	Predicted RBP	0.9	□□□□□ -2.27
GRR1	YJR090C	CCW12	Q12127	133 aa		0.9	□□□□□ -2.27
GRR1	YJR090C	YBR032W	P38223	100 aa		0.89	□□□□□ -2.27
GRR1	YJR090C	SEN15	Q04675	128 aa		0.89	□□□□□ -2.27
GRR1	YJR090C	SWC7	Q06707	132 aa		0.89	□□□□□ -2.27
GRR1	YJR090C	YBR242W	P38331	238 aa		0.88	□□□□□ -2.27
GRR1	YJR090C	DAD1	Q12248	94 aa		0.88	□□□□□ -2.27
GRR1	YJR090C	PAU19	P0CE85	124 aa		0.88	□□□□□ -2.27
GRR1	YJR090C	PAU3	P25610	124 aa		0.88	□□□□□ -2.27
GRR1	YJR090C	YMR175W-A	Q3E766	64 aa		0.88	□□□□□ -2.27
GRR1	YJR090C	Q0297	Q9ZZV8	51 aa		0.88	□□□□□ -2.27
GRR1	YJR090C	CCW14	O13547	238 aa		0.88	□□□□□ -2.27
GRR1	YJR090C	YLR255C	O13574	117 aa		0.88	□□□□□ -2.27
GRR1	YJR090C	ZEO1	Q08245	113 aa		0.88	□□□□□ -2.27
GRR1	YJR090C	CDC39	P25655	2108 aa	Known RBP	0.87	□□□□□ -2.27
GRR1	YJR090C	RPL36B	O14455	100 aa	Known RBP	0.87	□□□□□ -2.27
GRR1	YJR090C	RPL36A	P05745	100 aa	Predicted RBP	0.87	□□□□□ -2.27
GRR1	YJR090C	YHL005C	P38752	130 aa		0.87	□□□□□ -2.27
GRR1	YJR090C	YAR064W	P39563	99 aa		0.87	□□□□□ -2.27
GRR1	YJR090C	FIT3	Q08907	204 aa		0.87	□□□□□ -2.27
GRR1	YJR090C	YPR203W	Q08994	102 aa		0.87	□□□□□ -2.27
GRR1	YJR090C	MHF1	Q3E835	90 aa		0.87	□□□□□ -2.27
GRR1	YJR090C	SPI1	P40092	148 aa		0.87	□□□□□ -2.27
GRR1	YJR090C	RSM19	P53733	91 aa	Predicted RBP	0.87	□□□□□ -2.27
GRR1	YJR090C	ATG8	P38182	117 aa	RIP-Chip data	0.86	□□□□□ -2.27	not detected
GRR1	YJR090C	VPS55	P47111	140 aa		0.86	□□□□□ -2.27
GRR1	YJR090C	SNN1	P48232	102 aa		0.86	□□□□□ -2.27
GRR1	YJR090C	ACC1	Q00955	2233 aa	Known RBP	0.86	□□□□□ -2.27
GRR1	YJR090C	PAU16	P35994	123 aa		0.86	□□□□□ -2.27
GRR1	YJR090C	PAU15	P40585	124 aa		0.86	□□□□□ -2.27
GRR1	YJR090C	YDR042C	Q03205	200 aa		0.85	□□□□□ -2.27
GRR1	YJR090C	YGL194C-A	Q2V2P6	80 aa		0.85	□□□□□ -2.27
GRR1	YJR090C	YLR285C-A	Q3E771	56 aa		0.85	□□□□□ -2.27
GRR1	YJR090C	ICS3	P47034	131 aa		0.85	□□□□□ -2.27
GRR1	YJR090C	SCP1	Q08873	200 aa		0.85	□□□□□ -2.27
GRR1	YJR090C	COX9	P07255	59 aa		0.85	□□□□□ -2.27
GRR1	YJR090C	NCE101	Q02820	53 aa		0.84	□□□□□ -2.27
GRR1	YJR090C	YCR001W	P25347	104 aa		0.84	□□□□□ -2.27
GRR1	YJR090C	MRPL38	P35996	138 aa	Predicted RBP	0.84	□□□□□ -2.27
GRR1	YJR090C	RPS27A	P35997	82 aa	Known RBP	0.84	□□□□□ -2.28
GRR1	YJR090C	RPS27B	P38711	82 aa		0.84	□□□□□ -2.28
GRR1	YJR090C	LCL2	Q08045	131 aa		0.84	□□□□□ -2.28
GRR1	YJR090C	YCL048W-A	Q2V2Q2	79 aa		0.84	□□□□□ -2.28
GRR1	YJR090C	YBR013C	P38215	129 aa		0.83	□□□□□ -2.28
GRR1	YJR090C	SNU13	P39990	126 aa	Known RBP	0.83	□□□□□ -2.28
GRR1	YJR090C	PAU5	P43575	122 aa		0.83	□□□□□ -2.28
GRR1	YJR090C	YJL009W	P47078	108 aa		0.83	□□□□□ -2.28
GRR1	YJR090C	YOL013W-A	P0C272	63 aa	Predicted RBP	0.83	□□□□□ -2.28
GRR1	YJR090C	MGR2	Q02889	113 aa		0.83	□□□□□ -2.28
GRR1	YJR090C	VMA21	P41806	77 aa		0.83	□□□□□ -2.28
GRR1	YJR090C	HPA2	Q06592	156 aa		0.83	□□□□□ -2.28
GRR1	YJR090C	IMP2	P46972	177 aa		0.82	□□□□□ -2.28
GRR1	YJR090C	SMX2	P40204	77 aa	Known RBP	0.82	□□□□□ -2.28
GRR1	YJR090C	COA6	Q3E846	104 aa		0.82	□□□□□ -2.28
GRR1	YJR090C	FPR2	P32472	135 aa		0.81	□□□□□ -2.28
GRR1	YJR090C	EMC5	P40540	141 aa		0.81	□□□□□ -2.28
GRR1	YJR090C	LCL1	Q02786	101 aa		0.81	□□□□□ -2.28
GRR1	YJR090C	AUA1	P32450	94 aa		0.81	□□□□□ -2.28
GRR1	YJR090C	YHR138C	P38841	114 aa	Predicted RBP	0.81	□□□□□ -2.28
GRR1	YJR090C	IRC21	Q04772	201 aa		0.81	□□□□□ -2.28
GRR1	YJR090C	POC4	Q12245	148 aa	Predicted RBP	0.81	□□□□□ -2.28
GRR1	YJR090C	YOR343C	Q12484	108 aa		0.81	□□□□□ -2.28
GRR1	YJR090C	BRR2	P32639	2163 aa	Known RBP	0.81	□□□□□ -2.28
GRR1	YJR090C	MSL1	P40567	111 aa	Predicted RBP	0.81	□□□□□ -2.28
GRR1	YJR090C	MIC27	P50945	234 aa		0.81	□□□□□ -2.28
GRR1	YJR090C	YDR029W	Q12111	104 aa		0.81	□□□□□ -2.28
GRR1	YJR090C	HMRA1	P0CY11	126 aa		0.8	□□□□□ -2.28
GRR1	YJR090C	ROX3	P25046	220 aa		0.8	□□□□□ -2.28
GRR1	YJR090C	YLR363W-A	Q3E747	85 aa		0.8	□□□□□ -2.28
GRR1	YJR090C	YGR240C-A	Q3E786	66 aa		0.8	□□□□□ -2.28
GRR1	YJR090C	NHP10	Q03435	203 aa		0.8	□□□□□ -2.28
GRR1	YJR090C	YPR117W	Q06116	2489 aa		0.8	□□□□□ -2.28
GRR1	YJR090C	CYB5	P40312	120 aa		0.79	□□□□□ -2.28
GRR1	YJR090C	RPL37A	P49166	88 aa	Known RBP	0.79	□□□□□ -2.28
GRR1	YJR090C	ICY1	Q04329	127 aa		0.79	□□□□□ -2.28
GRR1	YJR090C	YKL068W-A	Q3E826	78 aa		0.79	□□□□□ -2.28
GRR1	YJR090C	LSM6	Q06406	86 aa	Known RBP	0.79	□□□□□ -2.28
GRR1	YJR090C	YOR072W	Q08486	104 aa		0.79	□□□□□ -2.28
GRR1	YJR090C	RPS22A	P0C0W1	130 aa	Known RBP	0.79	□□□□□ -2.28
GRR1	YJR090C	HMRA2	P0CY13	119 aa		0.79	□□□□□ -2.28
GRR1	YJR090C	YOL131W	Q08270	108 aa		0.79	□□□□□ -2.28
GRR1	YJR090C	RPS22B	Q3E7Y3	130 aa	Known RBP	0.79	□□□□□ -2.28
GRR1	YJR090C	YOL118C	Q08259	102 aa		0.77	□□□□□ -2.29
GRR1	YJR090C	NUM1	Q00402	2748 aa		0.77	□□□□□ -2.29
GRR1	YJR090C	HUG1	Q6Q5K6	68 aa		0.77	□□□□□ -2.29
GRR1	YJR090C	RPS11A	P0CX47	156 aa	Known RBP	0.76	□□□□□ -2.29
GRR1	YJR090C	RPS11B	P0CX48	156 aa	Known RBP	0.76	□□□□□ -2.29
GRR1	YJR090C	RPA12	P32529	125 aa	Known RBP	0.76	□□□□□ -2.29
GRR1	YJR090C	YGL041C-B	Q3E750	60 aa		0.76	□□□□□ -2.29
GRR1	YJR090C	YIL102C	P40488	101 aa		0.76	□□□□□ -2.29
GRR1	YJR090C	ECM12	O13529	151 aa		0.76	□□□□□ -2.29
GRR1	YJR090C	MRPL31	P14063	131 aa	Predicted RBP	0.76	□□□□□ -2.29
GRR1	YJR090C	YCR095W-A	Q3E787	52 aa		0.76	□□□□□ -2.29
GRR1	YJR090C	ENV10	Q99382	181 aa		0.76	□□□□□ -2.29

Retrieved 100 of 5,963 RNA–protein pairs in 665.1 ms