RNA–Protein interactions for RNA: YJR060W

CBF1, Transcript of Basic helix-loop-helix (bHLH) protein, yeastyeast

Gene CBF1, Length 1,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CBF1YJR060W YBR121C-AP0C5L4 52 aa3.6□□□□□ -1.83
CBF1YJR060W ATP15P21306 62 aa3.6□□□□□ -1.83
CBF1YJR060W YAL064WP39711 94 aa3.6□□□□□ -1.83
CBF1YJR060W YMR295CQ03559 197 aa3.6□□□□□ -1.83
CBF1YJR060W YDR029WQ12111 104 aa3.6□□□□□ -1.83
CBF1YJR060W YAL063C-AQ3E791 96 aa3.6□□□□□ -1.83
CBF1YJR060W YIL134C-AQ45U18 67 aa3.6□□□□□ -1.83
CBF1YJR060W VTC1P40046 129 aaRIP-Chip data3.59□□□□□ -1.83not detected
CBF1YJR060W PEX17P40155 199 aa3.59□□□□□ -1.83
CBF1YJR060W SNA2P56508 79 aa3.59□□□□□ -1.83
CBF1YJR060W AIM11P87275 137 aa3.59□□□□□ -1.83
CBF1YJR060W YDL241WQ07738 123 aa3.59□□□□□ -1.83
CBF1YJR060W LCL2Q08045 131 aa3.59□□□□□ -1.83
CBF1YJR060W YKL183C-AQ3E765 70 aa3.59□□□□□ -1.83
CBF1YJR060W YKL044WP36092 106 aa3.58□□□□□ -1.84
CBF1YJR060W YBL081WP38180 368 aaKnown RBP3.58□□□□□ -1.84
CBF1YJR060W SHU1P38751 150 aa3.58□□□□□ -1.84
CBF1YJR060W ECM19Q06011 112 aa3.58□□□□□ -1.84
CBF1YJR060W SEN15Q04675 128 aa3.57□□□□□ -1.84
CBF1YJR060W YAL065CO13511 128 aa3.56□□□□□ -1.84
CBF1YJR060W QCR8P08525 94 aa3.56□□□□□ -1.84
CBF1YJR060W HAP3P13434 144 aa3.56□□□□□ -1.84
CBF1YJR060W YGL041C-BQ3E750 60 aa3.56□□□□□ -1.84
CBF1YJR060W ADH1P00330 348 aaKnown RBP3.55□□□□□ -1.84
CBF1YJR060W RPL28P02406 149 aaKnown RBP3.55□□□□□ -1.84
CBF1YJR060W YKR041WP36134 250 aa3.55□□□□□ -1.84
CBF1YJR060W RPF1P38805 295 aaKnown RBP3.55□□□□□ -1.84
CBF1YJR060W YPL261CQ08976 102 aa3.55□□□□□ -1.84
CBF1YJR060W ECM12O13529 151 aa3.54□□□□□ -1.84
CBF1YJR060W AQY2P0CD90 149 aa3.54□□□□□ -1.84
CBF1YJR060W SEC11P15367 167 aa3.54□□□□□ -1.84
CBF1YJR060W COX10P21592 462 aa3.54□□□□□ -1.84
CBF1YJR060W MSL1P40567 111 aaPredicted RBP3.54□□□□□ -1.84
CBF1YJR060W YGL230CP53074 147 aa3.54□□□□□ -1.84
CBF1YJR060W FYV7Q12247 151 aa3.54□□□□□ -1.84
CBF1YJR060W MRPL44P19956 98 aa3.53□□□□□ -1.84
CBF1YJR060W YPL073CP40323 161 aa3.53□□□□□ -1.84
CBF1YJR060W LCL1Q02786 101 aa3.53□□□□□ -1.84
CBF1YJR060W IGO2Q9P305 131 aa3.53□□□□□ -1.84
CBF1YJR060W YFL019CP43576 117 aa3.52□□□□□ -1.85
CBF1YJR060W ABF2Q02486 183 aa3.52□□□□□ -1.85
CBF1YJR060W YBL008W-AQ3E821 79 aa3.52□□□□□ -1.85
CBF1YJR060W YLR307C-AQ3E825 87 aa3.52□□□□□ -1.85
CBF1YJR060W YBL039W-BP0C268 59 aa3.51□□□□□ -1.85
CBF1YJR060W CWP2P43497 92 aa3.51□□□□□ -1.85
CBF1YJR060W LSM8P47093 109 aaKnown RBP3.51□□□□□ -1.85
CBF1YJR060W SCS22Q6Q595 175 aa3.51□□□□□ -1.85
CBF1YJR060W MBF1O14467 151 aaKnown RBP3.5□□□□□ -1.85
CBF1YJR060W ATP5P09457 212 aa3.5□□□□□ -1.85
CBF1YJR060W YDL022C-AP0C5L6 82 aa3.5□□□□□ -1.85
CBF1YJR060W FUN14P18411 198 aa3.5□□□□□ -1.85
CBF1YJR060W MVB12P42939 101 aa3.5□□□□□ -1.85
CBF1YJR060W YDL157CQ12082 118 aa3.5□□□□□ -1.85
CBF1YJR060W Q0032Q9ZZX7 96 aa3.5□□□□□ -1.85
CBF1YJR060W MRPS12P53732 153 aa3.49□□□□□ -1.85
CBF1YJR060W SMD1Q02260 146 aaPredicted RBP3.49□□□□□ -1.85
CBF1YJR060W YLL006W-AQ3E814 58 aa3.49□□□□□ -1.85
CBF1YJR060W RPL29P05747 59 aaPredicted RBP3.48□□□□□ -1.85
CBF1YJR060W YEL067CP39978 195 aa3.48□□□□□ -1.85
CBF1YJR060W AIM19P40502 157 aa3.48□□□□□ -1.85
CBF1YJR060W MMS2P53152 137 aa3.48□□□□□ -1.85
CBF1YJR060W YML079WQ03629 201 aa3.48□□□□□ -1.85
CBF1YJR060W UGX2P32772 223 aa3.47□□□□□ -1.85
CBF1YJR060W YNR077CP53758 84 aa3.47□□□□□ -1.85
CBF1YJR060W NAT5Q08689 176 aa3.47□□□□□ -1.85
CBF1YJR060W YOR020W-AQ3E824 90 aa3.47□□□□□ -1.85
CBF1YJR060W YGL034CP53186 121 aa3.46□□□□□ -1.86
CBF1YJR060W RPL26AP05743 127 aaKnown RBP3.45□□□□□ -1.86
CBF1YJR060W RPL26BP53221 127 aaKnown RBP3.45□□□□□ -1.86
CBF1YJR060W YNL190WP53872 204 aa3.45□□□□□ -1.86
CBF1YJR060W PAU23Q07987 124 aa3.45□□□□□ -1.86
CBF1YJR060W PAU17Q12370 124 aa3.45□□□□□ -1.86
CBF1YJR060W YKL023C-AQ2V2P3 75 aa3.45□□□□□ -1.86
CBF1YJR060W YDL085C-AQ3E7B7 68 aaKnown RBP3.45□□□□□ -1.86
CBF1YJR060W YBL112CQ3E7Y4 105 aa3.45□□□□□ -1.86
CBF1YJR060W YER039C-AP0CD97 72 aa3.44□□□□□ -1.86
CBF1YJR060W UBC4P15731 148 aa3.44□□□□□ -1.86
CBF1YJR060W SCM4P32564 187 aa3.44□□□□□ -1.86
CBF1YJR060W YGL193CP53097 103 aa3.44□□□□□ -1.86
CBF1YJR060W ISD11Q6Q560 94 aa3.44□□□□□ -1.86
CBF1YJR060W KNH1P50112 268 aa3.43□□□□□ -1.86
CBF1YJR060W ELC1Q03071 99 aa3.43□□□□□ -1.86
CBF1YJR060W HPA2Q06592 156 aa3.43□□□□□ -1.86
CBF1YJR060W YLR363W-AQ3E747 85 aa3.43□□□□□ -1.86
CBF1YJR060W YHR130CP38834 111 aa3.42□□□□□ -1.86
CBF1YJR060W SAE3P89114 91 aa3.42□□□□□ -1.86
CBF1YJR060W RGM1Q00453 211 aa3.42□□□□□ -1.86
CBF1YJR060W CWC27Q02770 301 aa3.42□□□□□ -1.86
CBF1YJR060W MID2P36027 376 aa3.41□□□□□ -1.86
CBF1YJR060W YNL042W-BQ3E7Z2 85 aa3.41□□□□□ -1.86
CBF1YJR060W PAI3P01094 68 aa3.39□□□□□ -1.87
CBF1YJR060W POP7P38291 140 aa3.39□□□□□ -1.87
CBF1YJR060W YER181CP40097 107 aa3.39□□□□□ -1.87
CBF1YJR060W ICY1Q04329 127 aa3.39□□□□□ -1.87
CBF1YJR060W IRC21Q04772 201 aa3.39□□□□□ -1.87
CBF1YJR060W YBR230W-AQ3E762 66 aa3.38□□□□□ -1.87
CBF1YJR060W GLC8P41818 229 aa3.37□□□□□ -1.87
CBF1YJR060W DDR2P89113 61 aa3.37□□□□□ -1.87
CBF1YJR060W YPL257WQ08974 193 aa3.37□□□□□ -1.87
CBF1YJR060W YJL127C-BQ3E828 52 aa3.37□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 14.1 ms