RNA–Protein interactions for RNA: YJL053W

PEP8, Transcript of Vacuolar protein component of the retromer, yeastyeast

Gene PEP8, Length 1,140 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP8YJL053W HHO1P53551 258 aa0.62□□□□□ -2.31
PEP8YJL053W COX12Q01519 83 aa0.62□□□□□ -2.31
PEP8YJL053W COF1Q03048 143 aaKnown RBP0.62□□□□□ -2.31
PEP8YJL053W YCR075W-AQ3E830 75 aa0.62□□□□□ -2.31
PEP8YJL053W HUG1Q6Q5K6 68 aa0.62□□□□□ -2.31
PEP8YJL053W YHR213WP0CI67 198 aa0.61□□□□□ -2.31
PEP8YJL053W RPS11AP0CX47 156 aaKnown RBP0.61□□□□□ -2.31
PEP8YJL053W RPS11BP0CX48 156 aaKnown RBP0.61□□□□□ -2.31
PEP8YJL053W UTP11P34247 250 aaPredicted RBP0.61□□□□□ -2.31
PEP8YJL053W MVB12P42939 101 aa0.61□□□□□ -2.31
PEP8YJL053W PAM16P42949 149 aa0.61□□□□□ -2.31
PEP8YJL053W SGF11Q03067 99 aa0.61□□□□□ -2.31
PEP8YJL053W YMR090WQ04304 227 aaKnown RBP0.61□□□□□ -2.31
PEP8YJL053W FRQ1Q06389 190 aa0.61□□□□□ -2.31
PEP8YJL053W YOL118CQ08259 102 aa0.61□□□□□ -2.31
PEP8YJL053W YPR145C-AQ2V2P0 78 aa0.61□□□□□ -2.31
PEP8YJL053W YOR192C-CQ3E736 78 aa0.61□□□□□ -2.31
PEP8YJL053W YHR213W-AQ8TGT4 77 aa0.61□□□□□ -2.31
PEP8YJL053W YPR010C-AA5Z2X5 72 aa0.6□□□□□ -2.31
PEP8YJL053W QCR9P22289 66 aa0.6□□□□□ -2.31
PEP8YJL053W YCR050CP25630 102 aa0.6□□□□□ -2.31
PEP8YJL053W EMP24P32803 203 aaKnown RBP0.6□□□□□ -2.31
PEP8YJL053W SFT2P38166 215 aa0.6□□□□□ -2.31
PEP8YJL053W YBR013CP38215 129 aa0.6□□□□□ -2.31
PEP8YJL053W YBR292CP38357 123 aa0.6□□□□□ -2.31
PEP8YJL053W YER137CP40083 148 aaKnown RBP0.6□□□□□ -2.31
PEP8YJL053W SPC1P46965 94 aa0.6□□□□□ -2.31
PEP8YJL053W IMP2P46972 177 aa0.6□□□□□ -2.31
PEP8YJL053W MIC27P50945 234 aa0.6□□□□□ -2.31
PEP8YJL053W YGR039WP53225 103 aa0.6□□□□□ -2.31
PEP8YJL053W ERI1P62651 68 aaKnown RBP0.6□□□□□ -2.31
PEP8YJL053W DYN2Q02647 92 aa0.6□□□□□ -2.31
PEP8YJL053W TVP18Q04767 167 aa0.6□□□□□ -2.31
PEP8YJL053W COA4Q05809 96 aa0.6□□□□□ -2.31
PEP8YJL053W YGR240C-AQ3E786 66 aa0.6□□□□□ -2.31
PEP8YJL053W YOR376W-AQ3E805 51 aa0.6□□□□□ -2.31
PEP8YJL053W RTC6O14464 93 aa0.59□□□□□ -2.31
PEP8YJL053W YEA6P39953 335 aa0.59□□□□□ -2.31
PEP8YJL053W YMR082CQ04276 118 aa0.59□□□□□ -2.31
PEP8YJL053W YLR042CQ07990 161 aa0.59□□□□□ -2.31
PEP8YJL053W FCF2Q12035 217 aaPredicted RBP0.59□□□□□ -2.31
PEP8YJL053W YLR146W-AQ2V2P1 62 aa0.59□□□□□ -2.31
PEP8YJL053W YOR011W-AQ3E807 68 aa0.59□□□□□ -2.31
PEP8YJL053W YLR342W-AQ3E810 57 aa0.59□□□□□ -2.31
PEP8YJL053W COA2Q3E823 68 aa0.59□□□□□ -2.31
PEP8YJL053W PFY1P07274 126 aa0.58□□□□□ -2.32
PEP8YJL053W YHR173CP38864 112 aa0.58□□□□□ -2.32
PEP8YJL053W GCV3P39726 170 aaPredicted RBP0.58□□□□□ -2.32
PEP8YJL053W SNU13P39990 126 aaKnown RBP0.58□□□□□ -2.32
PEP8YJL053W SPI1P40092 148 aa0.58□□□□□ -2.32
PEP8YJL053W CYB5P40312 120 aa0.58□□□□□ -2.32
PEP8YJL053W EMC5P40540 141 aa0.58□□□□□ -2.32
PEP8YJL053W GAT4P40569 121 aa0.58□□□□□ -2.32
PEP8YJL053W BRP1P53194 125 aa0.58□□□□□ -2.32
PEP8YJL053W YGR017WP53210 297 aa0.58□□□□□ -2.32
PEP8YJL053W POC4Q12245 148 aaPredicted RBP0.58□□□□□ -2.32
PEP8YJL053W DAD1Q12248 94 aa0.58□□□□□ -2.32
PEP8YJL053W YLR361C-AQ3E795 98 aa0.58□□□□□ -2.32
PEP8YJL053W PCC1Q3E833 88 aa0.58□□□□□ -2.32
PEP8YJL053W BRR2P32639 2163 aaKnown RBP0.57□□□□□ -2.32
PEP8YJL053W PAU1P0CE88 120 aa0.57□□□□□ -2.32
PEP8YJL053W PAU14P0CE89 120 aa0.57□□□□□ -2.32
PEP8YJL053W PAU6P0CE90 120 aa0.57□□□□□ -2.32
PEP8YJL053W PAU18P0CE91 120 aa0.57□□□□□ -2.32
PEP8YJL053W PAU8P0CE92 120 aa0.57□□□□□ -2.32
PEP8YJL053W PAU11P0CE93 120 aa0.57□□□□□ -2.32
PEP8YJL053W SEC59P20048 519 aa0.57□□□□□ -2.32
PEP8YJL053W MRP49P32388 137 aa0.57□□□□□ -2.32
PEP8YJL053W QCR10P37299 77 aa0.57□□□□□ -2.32
PEP8YJL053W LSM2P38203 95 aaKnown RBP0.57□□□□□ -2.32
PEP8YJL053W PAU13P38725 120 aa0.57□□□□□ -2.32
PEP8YJL053W YAR029WP39549 74 aa0.57□□□□□ -2.32
PEP8YJL053W YGL149WP53116 101 aa0.57□□□□□ -2.32
PEP8YJL053W PAU4P53427 120 aa0.57□□□□□ -2.32
PEP8YJL053W TOM7P53507 60 aa0.57□□□□□ -2.32
PEP8YJL053W PMP3P87284 55 aa0.57□□□□□ -2.32
PEP8YJL053W PAU10Q03050 120 aa0.57□□□□□ -2.32
PEP8YJL053W PAU20Q08322 120 aa0.57□□□□□ -2.32
PEP8YJL053W YOR105WQ08504 108 aa0.57□□□□□ -2.32
PEP8YJL053W YBR200W-AQ3E755 54 aa0.57□□□□□ -2.32
PEP8YJL053W PAU9Q3E770 120 aa0.57□□□□□ -2.32
PEP8YJL053W YMR122W-AQ3E842 84 aa0.57□□□□□ -2.32
PEP8YJL053W STT4P37297 1900 aa0.57□□□□□ -2.32
PEP8YJL053W YDR034C-AP0C289 58 aa0.56□□□□□ -2.32
PEP8YJL053W HMRA1P0CY11 126 aa0.56□□□□□ -2.32
PEP8YJL053W HAP3P13434 144 aa0.56□□□□□ -2.32
PEP8YJL053W MRPL31P14063 131 aaPredicted RBP0.56□□□□□ -2.32
PEP8YJL053W UBC5P15732 148 aa0.56□□□□□ -2.32
PEP8YJL053W HSP10P38910 106 aa0.56□□□□□ -2.32
PEP8YJL053W VMA7P39111 118 aa0.56□□□□□ -2.32
PEP8YJL053W PAU7P39545 55 aa0.56□□□□□ -2.32
PEP8YJL053W PAU5P43575 122 aa0.56□□□□□ -2.32
PEP8YJL053W SFT1P43682 97 aa0.56□□□□□ -2.32
PEP8YJL053W LCL1Q02786 101 aa0.56□□□□□ -2.32
PEP8YJL053W ELC1Q03071 99 aa0.56□□□□□ -2.32
PEP8YJL053W ATP14Q12349 124 aa0.56□□□□□ -2.32
PEP8YJL053W COX19Q3E731 98 aa0.56□□□□□ -2.32
PEP8YJL053W YGL041C-BQ3E750 60 aa0.56□□□□□ -2.32
PEP8YJL053W YLR307C-AQ3E825 87 aa0.56□□□□□ -2.32
PEP8YJL053W YLL066W-BQ8TGJ7 56 aa0.56□□□□□ -2.32
Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms