RNA–Protein interactions for RNA: YJL029C

VPS53, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeastyeast

Gene VPS53, Length 2,469 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS53YJL029C YMR103CQ04436 120 aa2.32□□□□□ -2.04
VPS53YJL029C CNL1Q06333 122 aa2.32□□□□□ -2.04
VPS53YJL029C RPL29P05747 59 aaPredicted RBP2.32□□□□□ -2.04
VPS53YJL029C PAU16P35994 123 aa2.32□□□□□ -2.04
VPS53YJL029C OXA1P39952 402 aa2.32□□□□□ -2.04
VPS53YJL029C TPT1Q12272 230 aaKnown RBP2.32□□□□□ -2.04
VPS53YJL029C ADH1P00330 348 aaKnown RBP2.31□□□□□ -2.04
VPS53YJL029C ATP15P21306 62 aa2.31□□□□□ -2.04
VPS53YJL029C SEN15Q04675 128 aa2.31□□□□□ -2.04
VPS53YJL029C YER039C-AP0CD97 72 aa2.31□□□□□ -2.04
VPS53YJL029C YER134CP40081 178 aa2.31□□□□□ -2.04
VPS53YJL029C AIM11P87275 137 aa2.31□□□□□ -2.04
VPS53YJL029C ABF2Q02486 183 aa2.31□□□□□ -2.04
VPS53YJL029C YKL023C-AQ2V2P3 75 aa2.31□□□□□ -2.04
VPS53YJL029C COA6Q3E846 104 aa2.31□□□□□ -2.04
VPS53YJL029C YKL044WP36092 106 aa2.3□□□□□ -2.04
VPS53YJL029C MVB12P42939 101 aa2.3□□□□□ -2.04
VPS53YJL029C YFL067WP43537 175 aa2.3□□□□□ -2.04
VPS53YJL029C YGL193CP53097 103 aa2.3□□□□□ -2.04
VPS53YJL029C CUE4Q04201 117 aaPredicted RBP2.3□□□□□ -2.04
VPS53YJL029C SSS1P35179 80 aa2.3□□□□□ -2.04
VPS53YJL029C CWP2P43497 92 aa2.3□□□□□ -2.04
VPS53YJL029C Q0032Q9ZZX7 96 aa2.3□□□□□ -2.04
VPS53YJL029C MRPL44P19956 98 aa2.29□□□□□ -2.04
VPS53YJL029C ARO2P28777 376 aaKnown RBP2.29□□□□□ -2.04
VPS53YJL029C FYV4P38783 130 aaPredicted RBP2.29□□□□□ -2.04
VPS53YJL029C CWC27Q02770 301 aa2.29□□□□□ -2.04
VPS53YJL029C HYP2P23301 157 aaKnown RBP2.28□□□□□ -2.04
VPS53YJL029C YKR041WP36134 250 aa2.28□□□□□ -2.04
VPS53YJL029C YNL190WP53872 204 aa2.28□□□□□ -2.04
VPS53YJL029C SMD1Q02260 146 aaPredicted RBP2.28□□□□□ -2.04
VPS53YJL029C FYV7Q12247 151 aa2.28□□□□□ -2.04
VPS53YJL029C YOR020W-AQ3E824 90 aa2.28□□□□□ -2.04
VPS53YJL029C CPR1P14832 162 aaKnown RBP2.28□□□□□ -2.04
VPS53YJL029C YAR1P46683 200 aa2.28□□□□□ -2.04
VPS53YJL029C KNH1P50112 268 aa2.28□□□□□ -2.04
VPS53YJL029C MRPS12P53732 153 aa2.28□□□□□ -2.04
VPS53YJL029C YPL261CQ08976 102 aa2.28□□□□□ -2.04
VPS53YJL029C YNL162W-AQ3E7A8 72 aa2.28□□□□□ -2.04
VPS53YJL029C IGO2Q9P305 131 aa2.28□□□□□ -2.04
VPS53YJL029C UBC4P15731 148 aa2.27□□□□□ -2.05
VPS53YJL029C YCR043CP25361 127 aa2.27□□□□□ -2.05
VPS53YJL029C FUN14P18411 198 aa2.27□□□□□ -2.05
VPS53YJL029C HAC1P41546 238 aa2.27□□□□□ -2.05
VPS53YJL029C SPG1P50088 95 aa2.27□□□□□ -2.05
VPS53YJL029C YLL006W-AQ3E814 58 aa2.27□□□□□ -2.05
VPS53YJL029C RPL26AP05743 127 aaKnown RBP2.26□□□□□ -2.05
VPS53YJL029C RPL26BP53221 127 aaKnown RBP2.26□□□□□ -2.05
VPS53YJL029C YML079WQ03629 201 aa2.26□□□□□ -2.05
VPS53YJL029C SCS22Q6Q595 175 aa2.26□□□□□ -2.05
VPS53YJL029C IGD1P43598 195 aa2.26□□□□□ -2.05
VPS53YJL029C SEC11P15367 167 aa2.25□□□□□ -2.05
VPS53YJL029C EDC2P40023 145 aaPredicted RBP2.25□□□□□ -2.05
VPS53YJL029C GLC8P41818 229 aa2.25□□□□□ -2.05
VPS53YJL029C YDR010CQ12426 110 aa2.25□□□□□ -2.05
VPS53YJL029C YGR121W-AQ3E816 71 aa2.25□□□□□ -2.05
VPS53YJL029C YPL073CP40323 161 aa2.25□□□□□ -2.05
VPS53YJL029C YJR085CP47131 105 aaKnown RBP2.25□□□□□ -2.05
VPS53YJL029C YGL230CP53074 147 aa2.25□□□□□ -2.05
VPS53YJL029C YPL257WQ08974 193 aa2.25□□□□□ -2.05
VPS53YJL029C YIL134C-AQ45U18 67 aa2.25□□□□□ -2.05
VPS53YJL029C YDL022C-AP0C5L6 82 aa2.24□□□□□ -2.05
VPS53YJL029C DDR48P18899 430 aaKnown RBP2.24□□□□□ -2.05
VPS53YJL029C COX10P21592 462 aa2.24□□□□□ -2.05
VPS53YJL029C UGX2P32772 223 aa2.24□□□□□ -2.05
VPS53YJL029C SPT4P32914 102 aaPredicted RBP2.24□□□□□ -2.05
VPS53YJL029C YNL042W-BQ3E7Z2 85 aa2.24□□□□□ -2.05
VPS53YJL029C YJL197C-AP0C5P0 93 aa2.24□□□□□ -2.05
VPS53YJL029C RPL28P02406 149 aaKnown RBP2.23□□□□□ -2.05
VPS53YJL029C ATP5P09457 212 aa2.23□□□□□ -2.05
VPS53YJL029C YLR156WP0CE96 114 aa2.23□□□□□ -2.05
VPS53YJL029C YLR159WP0CE97 114 aa2.23□□□□□ -2.05
VPS53YJL029C YLR161WP0CE98 114 aa2.23□□□□□ -2.05
VPS53YJL029C MRPL11P36521 249 aaPredicted RBP2.23□□□□□ -2.05
VPS53YJL029C ICY1Q04329 127 aa2.23□□□□□ -2.05
VPS53YJL029C HPA2Q06592 156 aa2.23□□□□□ -2.05
VPS53YJL029C PAU17Q12370 124 aa2.23□□□□□ -2.05
VPS53YJL029C MSL1P40567 111 aaPredicted RBP2.23□□□□□ -2.05
VPS53YJL029C SAE3P89114 91 aa2.23□□□□□ -2.05
VPS53YJL029C YPL080CQ02826 108 aa2.23□□□□□ -2.05
VPS53YJL029C YGL149WP53116 101 aa2.22□□□□□ -2.05
VPS53YJL029C YNR077CP53758 84 aa2.22□□□□□ -2.05
VPS53YJL029C RGM1Q00453 211 aa2.22□□□□□ -2.05
VPS53YJL029C YOR268CQ08734 132 aa2.22□□□□□ -2.05
VPS53YJL029C YER078W-AQ3E7A2 54 aa2.22□□□□□ -2.05
VPS53YJL029C YIA6P40556 373 aa2.22□□□□□ -2.05
VPS53YJL029C YNL184CP53876 108 aa2.22□□□□□ -2.05
VPS53YJL029C YEL067CP39978 195 aa2.21□□□□□ -2.06
VPS53YJL029C SFT1P43682 97 aa2.21□□□□□ -2.06
VPS53YJL029C DDR2P89113 61 aa2.21□□□□□ -2.06
VPS53YJL029C YDL085C-AQ3E7B7 68 aaKnown RBP2.21□□□□□ -2.06
VPS53YJL029C NAT5Q08689 176 aa2.2□□□□□ -2.06
VPS53YJL029C YBR230W-AQ3E762 66 aa2.2□□□□□ -2.06
VPS53YJL029C SLO1Q3E784 85 aa2.2□□□□□ -2.06
VPS53YJL029C YLR236CA0A023PZG4 107 aa2.2□□□□□ -2.06
VPS53YJL029C YOR304C-AO14468 76 aa2.2□□□□□ -2.06
VPS53YJL029C IRC21Q04772 201 aa2.2□□□□□ -2.06
VPS53YJL029C YDL157CQ12082 118 aa2.2□□□□□ -2.06
VPS53YJL029C CMC4Q3E7A9 73 aa2.2□□□□□ -2.06
VPS53YJL029C FYV5P25585 152 aa2.19□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms