RNA–Protein interactions for RNA: YHR200W

RPN10, Transcript of Non-ATPase base subunit of the 19S RP of the 26S proteasome, yeastyeast

Gene RPN10, Length 807 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN10YHR200W MDN1Q12019 4910 aaKnown RBP9.77□□□□□ -0.84
RPN10YHR200W YAL065CO13511 128 aa9.77□□□□□ -0.85
RPN10YHR200W YAL064WP39711 94 aa9.77□□□□□ -0.85
RPN10YHR200W YFR057WP43625 151 aa9.77□□□□□ -0.85
RPN10YHR200W CWP2P43497 92 aa9.76□□□□□ -0.85
RPN10YHR200W VTS1Q08831 523 aaKnown RBP RIP-Chip data9.76□□□□□ -0.85 RIP-Chip
RPN10YHR200W YAR023CD6VPM8 179 aa9.75□□□□□ -0.85
RPN10YHR200W CDC43P18898 376 aa9.74□□□□□ -0.85
RPN10YHR200W YLR296WQ05898 108 aa9.74□□□□□ -0.85
RPN10YHR200W MHR1Q06630 226 aa9.74□□□□□ -0.85
RPN10YHR200W YNL190WP53872 204 aa9.73□□□□□ -0.85
RPN10YHR200W ABF2Q02486 183 aa9.73□□□□□ -0.85
RPN10YHR200W RRT15Q3E811 62 aa9.73□□□□□ -0.85
RPN10YHR200W MBF1O14467 151 aaKnown RBP9.72□□□□□ -0.85
RPN10YHR200W POP7P38291 140 aa9.72□□□□□ -0.85
RPN10YHR200W YIL102C-AQ2V2P5 75 aa9.69□□□□□ -0.86
RPN10YHR200W AQY2P0CD90 149 aa9.68□□□□□ -0.86
RPN10YHR200W YBL081WP38180 368 aaKnown RBP9.68□□□□□ -0.86
RPN10YHR200W YHR130CP38834 111 aa9.68□□□□□ -0.86
RPN10YHR200W YIA6P40556 373 aa9.68□□□□□ -0.86
RPN10YHR200W UBC11P52492 156 aa9.68□□□□□ -0.86
RPN10YHR200W YLL006W-AQ3E814 58 aa9.68□□□□□ -0.86
RPN10YHR200W YOR020W-AQ3E824 90 aa9.68□□□□□ -0.86
RPN10YHR200W NHP2P32495 156 aaPredicted RBP9.67□□□□□ -0.86
RPN10YHR200W SMD1Q02260 146 aaPredicted RBP9.67□□□□□ -0.86
RPN10YHR200W YPR170W-BP0C5R9 85 aa9.66□□□□□ -0.86
RPN10YHR200W MID2P36027 376 aa9.66□□□□□ -0.86
RPN10YHR200W SNA2P56508 79 aa9.65□□□□□ -0.86
RPN10YHR200W LSM6Q06406 86 aaKnown RBP9.65□□□□□ -0.86
RPN10YHR200W MVB12P42939 101 aa9.64□□□□□ -0.87
RPN10YHR200W RGM1Q00453 211 aa9.63□□□□□ -0.87
RPN10YHR200W YBL039W-BP0C268 59 aa9.62□□□□□ -0.87
RPN10YHR200W YFL019CP43576 117 aa9.62□□□□□ -0.87
RPN10YHR200W MET32Q12041 191 aa9.62□□□□□ -0.87
RPN10YHR200W ANB1P19211 157 aa9.61□□□□□ -0.87
RPN10YHR200W COX10P21592 462 aa9.61□□□□□ -0.87
RPN10YHR200W YDR029WQ12111 104 aa9.61□□□□□ -0.87
RPN10YHR200W YGL041C-BQ3E750 60 aa9.61□□□□□ -0.87
RPN10YHR200W RPL29P05747 59 aaPredicted RBP9.6□□□□□ -0.87
RPN10YHR200W HPA2Q06592 156 aa9.6□□□□□ -0.87
RPN10YHR200W EOS1P53938 366 aa9.58□□□□□ -0.88
RPN10YHR200W YPR195CQ06594 109 aa9.57□□□□□ -0.88
RPN10YHR200W YPL229WQ99395 206 aa9.57□□□□□ -0.88
RPN10YHR200W YNL198CP40166 100 aa9.56□□□□□ -0.88
RPN10YHR200W MRP10O75012 95 aa9.55□□□□□ -0.88
RPN10YHR200W YDR034C-AP0C289 58 aa9.55□□□□□ -0.88
RPN10YHR200W HYP2P23301 157 aaKnown RBP9.54□□□□□ -0.88
RPN10YHR200W STF1P01098 86 aa9.53□□□□□ -0.88
RPN10YHR200W ARO2P28777 376 aaKnown RBP9.53□□□□□ -0.88
RPN10YHR200W KNH1P50112 268 aa9.53□□□□□ -0.88
RPN10YHR200W Q0032Q9ZZX7 96 aa9.53□□□□□ -0.88
RPN10YHR200W RPL26AP05743 127 aaKnown RBP9.52□□□□□ -0.89
RPN10YHR200W AIM19P40502 157 aa9.52□□□□□ -0.89
RPN10YHR200W RPL26BP53221 127 aaKnown RBP9.52□□□□□ -0.89
RPN10YHR200W TMA7Q3E764 64 aaKnown RBP9.52□□□□□ -0.89
RPN10YHR200W ECM12O13529 151 aa9.51□□□□□ -0.89
RPN10YHR200W CPR1P14832 162 aaKnown RBP9.51□□□□□ -0.89
RPN10YHR200W HUR1P45820 110 aa9.5□□□□□ -0.89
RPN10YHR200W MRPL24P36525 258 aaPredicted RBP9.49□□□□□ -0.89
RPN10YHR200W ICY1Q04329 127 aa9.48□□□□□ -0.89
RPN10YHR200W IRC21Q04772 201 aa9.48□□□□□ -0.89
RPN10YHR200W UBC4P15731 148 aa9.47□□□□□ -0.89
RPN10YHR200W ISU2Q12056 156 aa9.47□□□□□ -0.89
RPN10YHR200W DUT1P33317 147 aa9.45□□□□□ -0.9
RPN10YHR200W PEX22P39718 180 aa9.43□□□□□ -0.9
RPN10YHR200W YNL162W-AQ3E7A8 72 aa9.42□□□□□ -0.9
RPN10YHR200W IGD1P43598 195 aa9.41□□□□□ -0.9
RPN10YHR200W SMP1P38128 452 aa9.39□□□□□ -0.91
RPN10YHR200W YLR236CA0A023PZG4 107 aa9.38□□□□□ -0.91
RPN10YHR200W YOR034C-AQ3E735 80 aa9.37□□□□□ -0.91
RPN10YHR200W LCL2Q08045 131 aa9.36□□□□□ -0.91
RPN10YHR200W GAT4P40569 121 aa9.35□□□□□ -0.91
RPN10YHR200W YLR307C-AQ3E825 87 aa9.35□□□□□ -0.91
RPN10YHR200W YER039C-AP0CD97 72 aa9.34□□□□□ -0.91
RPN10YHR200W YNL042W-BQ3E7Z2 85 aa9.34□□□□□ -0.91
RPN10YHR200W YGL193CP53097 103 aa9.32□□□□□ -0.92
RPN10YHR200W YPL257WQ08974 193 aa9.32□□□□□ -0.92
RPN10YHR200W FYV5P25585 152 aa9.31□□□□□ -0.92
RPN10YHR200W LCL1Q02786 101 aa9.31□□□□□ -0.92
RPN10YHR200W YBR230W-AQ3E762 66 aa9.31□□□□□ -0.92
RPN10YHR200W YJL127C-BQ3E828 52 aa9.31□□□□□ -0.92
RPN10YHR200W MSA2P36157 363 aa9.3□□□□□ -0.92
RPN10YHR200W SFT1P43682 97 aa9.29□□□□□ -0.92
RPN10YHR200W MPC3P53311 146 aa9.27□□□□□ -0.93
RPN10YHR200W SPT4P32914 102 aaPredicted RBP9.26□□□□□ -0.93
RPN10YHR200W DSE2P38844 325 aa9.26□□□□□ -0.93
RPN10YHR200W TSC3Q3E790 80 aa9.24□□□□□ -0.93
RPN10YHR200W YJR107C-AP0CT86 78 aa9.23□□□□□ -0.93
RPN10YHR200W DDR2P89113 61 aa9.23□□□□□ -0.93
RPN10YHR200W RPA12P32529 125 aaKnown RBP9.2□□□□□ -0.94
RPN10YHR200W BET1P22804 142 aa9.18□□□□□ -0.94
RPN10YHR200W YCR085WP25650 117 aa9.17□□□□□ -0.94
RPN10YHR200W ATX1P38636 73 aa9.17□□□□□ -0.94
RPN10YHR200W OST2P46964 130 aa9.16□□□□□ -0.94
RPN10YHR200W MMS2P53152 137 aa9.16□□□□□ -0.94
RPN10YHR200W YLR156WP0CE96 114 aa9.15□□□□□ -0.94
RPN10YHR200W YLR159WP0CE97 114 aa9.15□□□□□ -0.94
RPN10YHR200W YLR161WP0CE98 114 aa9.15□□□□□ -0.94
RPN10YHR200W YLR415CO13578 112 aa9.14□□□□□ -0.95
RPN10YHR200W YAR1P46683 200 aa9.13□□□□□ -0.95
Retrieved 100 of 5,963 RNA–protein pairs in 7.9 ms