RNA–Protein interactions for RNA: YHR041C

SRB2, Transcript of Subunit of the RNA polymerase II mediator complex, yeastyeast

Gene SRB2, Length 633 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRB2YHR041C ADH1P00330 348 aaKnown RBP8.85□□□□□ -0.99
SRB2YHR041C YDL241WQ07738 123 aa8.83□□□□□ -1
SRB2YHR041C PAU23Q07987 124 aa8.83□□□□□ -1
SRB2YHR041C PAU17Q12370 124 aa8.83□□□□□ -1
SRB2YHR041C YLL006W-AQ3E814 58 aa8.83□□□□□ -1
SRB2YHR041C QCR8P08525 94 aa8.82□□□□□ -1
SRB2YHR041C CDC43P18898 376 aa8.82□□□□□ -1
SRB2YHR041C SAE3P89114 91 aa8.82□□□□□ -1
SRB2YHR041C YDR029WQ12111 104 aa8.82□□□□□ -1
SRB2YHR041C YDL085C-AQ3E7B7 68 aaKnown RBP8.82□□□□□ -1
SRB2YHR041C CWP2P43497 92 aa8.81□□□□□ -1
SRB2YHR041C IGD1P43598 195 aa8.8□□□□□ -1
SRB2YHR041C PPT2Q12036 173 aa8.8□□□□□ -1
SRB2YHR041C AQY2P0CD90 149 aa8.79□□□□□ -1
SRB2YHR041C PEX22P39718 180 aa8.79□□□□□ -1
SRB2YHR041C UBC11P52492 156 aa8.78□□□□□ -1
SRB2YHR041C MVB12P42939 101 aa8.77□□□□□ -1.01
SRB2YHR041C SMD1Q02260 146 aaPredicted RBP8.76□□□□□ -1.01
SRB2YHR041C MBF1O14467 151 aaKnown RBP8.74□□□□□ -1.01
SRB2YHR041C ELC1Q03071 99 aa8.73□□□□□ -1.01
SRB2YHR041C STF1P01098 86 aa8.72□□□□□ -1.01
SRB2YHR041C GIS2P53849 153 aaKnown RBP RIP-Chip data8.72□□□□□ -1.01not detected
SRB2YHR041C CPR1P14832 162 aaKnown RBP8.71□□□□□ -1.02
SRB2YHR041C YFL019CP43576 117 aa8.71□□□□□ -1.02
SRB2YHR041C YLR363W-AQ3E747 85 aa8.71□□□□□ -1.02
SRB2YHR041C HAP3P13434 144 aa8.7□□□□□ -1.02
SRB2YHR041C ABF2Q02486 183 aa8.7□□□□□ -1.02
SRB2YHR041C HPA2Q06592 156 aa8.7□□□□□ -1.02
SRB2YHR041C YML079WQ03629 201 aa8.69□□□□□ -1.02
SRB2YHR041C YLR307C-AQ3E825 87 aa8.69□□□□□ -1.02
SRB2YHR041C YBL039W-BP0C268 59 aa8.67□□□□□ -1.02
SRB2YHR041C EOS1P53938 366 aa8.67□□□□□ -1.02
SRB2YHR041C AIM19P40502 157 aa8.66□□□□□ -1.02
SRB2YHR041C ECM12O13529 151 aa8.65□□□□□ -1.02
SRB2YHR041C ARO2P28777 376 aaKnown RBP8.65□□□□□ -1.02
SRB2YHR041C YOR034C-AQ3E735 80 aa8.65□□□□□ -1.02
SRB2YHR041C RPL29P05747 59 aaPredicted RBP8.64□□□□□ -1.03
SRB2YHR041C YIA6P40556 373 aa8.64□□□□□ -1.03
SRB2YHR041C GLC8P41818 229 aa8.63□□□□□ -1.03
SRB2YHR041C RGM1Q00453 211 aa8.63□□□□□ -1.03
SRB2YHR041C YNL162W-AQ3E7A8 72 aa8.63□□□□□ -1.03
SRB2YHR041C Q0032Q9ZZX7 96 aa8.63□□□□□ -1.03
SRB2YHR041C KNH1P50112 268 aa8.6□□□□□ -1.03
SRB2YHR041C CWC27Q02770 301 aa8.6□□□□□ -1.03
SRB2YHR041C YKL023C-AQ2V2P3 75 aa8.59□□□□□ -1.03
SRB2YHR041C YER181CP40097 107 aa8.58□□□□□ -1.04
SRB2YHR041C IRC21Q04772 201 aa8.58□□□□□ -1.04
SRB2YHR041C YLR296WQ05898 108 aa8.58□□□□□ -1.04
SRB2YHR041C UBC4P15731 148 aa8.57□□□□□ -1.04
SRB2YHR041C SAP30P38429 201 aa8.57□□□□□ -1.04
SRB2YHR041C PAI3P01094 68 aa8.56□□□□□ -1.04
SRB2YHR041C MHR1Q06630 226 aa8.56□□□□□ -1.04
SRB2YHR041C YGL041C-BQ3E750 60 aa8.56□□□□□ -1.04
SRB2YHR041C YOR020W-AQ3E824 90 aa8.56□□□□□ -1.04
SRB2YHR041C YGL193CP53097 103 aa8.55□□□□□ -1.04
SRB2YHR041C YPR170W-BP0C5R9 85 aa8.54□□□□□ -1.04
SRB2YHR041C YNL198CP40166 100 aa8.54□□□□□ -1.04
SRB2YHR041C YHR130CP38834 111 aa8.53□□□□□ -1.04
SRB2YHR041C LCL1Q02786 101 aa8.53□□□□□ -1.04
SRB2YHR041C LSO2Q3E772 92 aaKnown RBP8.53□□□□□ -1.04
SRB2YHR041C ICY1Q04329 127 aa8.52□□□□□ -1.05
SRB2YHR041C MMS2P53152 137 aa8.51□□□□□ -1.05
SRB2YHR041C LSM6Q06406 86 aaKnown RBP8.51□□□□□ -1.05
SRB2YHR041C COX10P21592 462 aa8.5□□□□□ -1.05
SRB2YHR041C ISU2Q12056 156 aa8.49□□□□□ -1.05
SRB2YHR041C YIL102C-AQ2V2P5 75 aa8.49□□□□□ -1.05
SRB2YHR041C YBR230W-AQ3E762 66 aa8.48□□□□□ -1.05
SRB2YHR041C NHP2P32495 156 aaPredicted RBP8.47□□□□□ -1.05
SRB2YHR041C POP7P38291 140 aa8.47□□□□□ -1.05
SRB2YHR041C YLR156WP0CE96 114 aa8.46□□□□□ -1.06
SRB2YHR041C YLR159WP0CE97 114 aa8.46□□□□□ -1.06
SRB2YHR041C YLR161WP0CE98 114 aa8.46□□□□□ -1.06
SRB2YHR041C DDR48P18899 430 aaKnown RBP8.46□□□□□ -1.06
SRB2YHR041C MET32Q12041 191 aa8.46□□□□□ -1.06
SRB2YHR041C YLR236CA0A023PZG4 107 aa8.43□□□□□ -1.06
SRB2YHR041C YPL257WQ08974 193 aa8.43□□□□□ -1.06
SRB2YHR041C MPC3P53311 146 aa8.42□□□□□ -1.06
SRB2YHR041C YNL042W-BQ3E7Z2 85 aa8.42□□□□□ -1.06
SRB2YHR041C YJL127C-BQ3E828 52 aa8.42□□□□□ -1.06
SRB2YHR041C MRPL24P36525 258 aaPredicted RBP8.41□□□□□ -1.06
SRB2YHR041C HUR1P45820 110 aa8.41□□□□□ -1.06
SRB2YHR041C MSA2P36157 363 aa8.4□□□□□ -1.06
SRB2YHR041C TMA7Q3E764 64 aaKnown RBP8.4□□□□□ -1.06
SRB2YHR041C UIP3P39547 235 aa8.39□□□□□ -1.07
SRB2YHR041C RPL26AP05743 127 aaKnown RBP8.38□□□□□ -1.07
SRB2YHR041C RPL26BP53221 127 aaKnown RBP8.38□□□□□ -1.07
SRB2YHR041C FYV5P25585 152 aa8.37□□□□□ -1.07
SRB2YHR041C DDR2P89113 61 aa8.37□□□□□ -1.07
SRB2YHR041C YFL067WP43537 175 aa8.36□□□□□ -1.07
SRB2YHR041C SPT4P32914 102 aaPredicted RBP8.32□□□□□ -1.08
SRB2YHR041C YMR230W-AQ3E7B5 62 aa8.32□□□□□ -1.08
SRB2YHR041C YBL112CQ3E7Y4 105 aa8.32□□□□□ -1.08
SRB2YHR041C BSC4P53841 131 aa8.31□□□□□ -1.08
SRB2YHR041C HYP2P23301 157 aaKnown RBP8.3□□□□□ -1.08
SRB2YHR041C EDC2P40023 145 aaPredicted RBP8.3□□□□□ -1.08
SRB2YHR041C YHR007C-AQ07074 71 aa8.29□□□□□ -1.08
SRB2YHR041C DSE2P38844 325 aa8.28□□□□□ -1.08
SRB2YHR041C YER039C-AP0CD97 72 aa8.27□□□□□ -1.09
SRB2YHR041C YLR415CO13578 112 aa8.26□□□□□ -1.09
SRB2YHR041C BET1P22804 142 aa8.23□□□□□ -1.09
Retrieved 100 of 5,963 RNA–protein pairs in 25.5 ms