RNA–Protein interactions for RNA: YFR002W

NIC96, Transcript of Linker nucleoporin component of the nuclear pore complex (NPC), yeastyeast

Gene NIC96, Length 2,520 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIC96YFR002W YBR027CP38220 110 aa1.17□□□□□ -2.22
NIC96YFR002W MPC2P38857 129 aa1.17□□□□□ -2.22
NIC96YFR002W AQY2P0CD90 149 aa1.17□□□□□ -2.22
NIC96YFR002W HYP2P23301 157 aaKnown RBP1.17□□□□□ -2.22
NIC96YFR002W YEA6P39953 335 aa1.17□□□□□ -2.22
NIC96YFR002W SNU13P39990 126 aaKnown RBP1.17□□□□□ -2.22
NIC96YFR002W GNA1P43577 159 aaPredicted RBP1.17□□□□□ -2.22
NIC96YFR002W SEN15Q04675 128 aa1.17□□□□□ -2.22
NIC96YFR002W YBR090CP38253 122 aa1.16□□□□□ -2.22
NIC96YFR002W YIL014C-AQ02598 104 aa1.16□□□□□ -2.22
NIC96YFR002W YLR296WQ05898 108 aa1.16□□□□□ -2.22
NIC96YFR002W YLR365WQ7LIF2 110 aa1.16□□□□□ -2.22
NIC96YFR002W MRPL11P36521 249 aaPredicted RBP1.16□□□□□ -2.22
NIC96YFR002W RRT15Q3E811 62 aa1.16□□□□□ -2.22
NIC96YFR002W RPL33AP05744 107 aaKnown RBP1.15□□□□□ -2.23
NIC96YFR002W YHR213WP0CI67 198 aa1.15□□□□□ -2.23
NIC96YFR002W PRE1P22141 198 aaKnown RBP1.15□□□□□ -2.23
NIC96YFR002W AIM4P38305 123 aaPredicted RBP1.15□□□□□ -2.23
NIC96YFR002W YER187WP40102 141 aa1.15□□□□□ -2.23
NIC96YFR002W FIT1Q04433 528 aa1.15□□□□□ -2.23
NIC96YFR002W YLR194CQ05777 254 aa1.15□□□□□ -2.23
NIC96YFR002W VAM10Q08474 114 aa1.15□□□□□ -2.23
NIC96YFR002W YPL261CQ08976 102 aa1.15□□□□□ -2.23
NIC96YFR002W PAU2P32612 120 aa1.15□□□□□ -2.23
NIC96YFR002W PAU24P38155 120 aa1.15□□□□□ -2.23
NIC96YFR002W HOR7Q05827 59 aa1.15□□□□□ -2.23
NIC96YFR002W YPR203WQ08994 102 aa1.15□□□□□ -2.23
NIC96YFR002W YCL048W-AQ2V2Q2 79 aa1.15□□□□□ -2.23
NIC96YFR002W MIC10Q96VH5 97 aa1.15□□□□□ -2.23
NIC96YFR002W YGR164WP53291 111 aa1.14□□□□□ -2.23
NIC96YFR002W LST8P41318 303 aa1.14□□□□□ -2.23
NIC96YFR002W RPL22BP56628 122 aaKnown RBP1.14□□□□□ -2.23
NIC96YFR002W PCC1Q3E833 88 aa1.14□□□□□ -2.23
NIC96YFR002W KSH1Q8TGJ3 72 aa1.14□□□□□ -2.23
NIC96YFR002W YHR212W-AP0CX91 67 aa1.13□□□□□ -2.23
NIC96YFR002W HMRA1P0CY11 126 aa1.13□□□□□ -2.23
NIC96YFR002W YMR122CQ03879 124 aa1.13□□□□□ -2.23
NIC96YFR002W COA4Q05809 96 aa1.13□□□□□ -2.23
NIC96YFR002W YDR029WQ12111 104 aa1.13□□□□□ -2.23
NIC96YFR002W OST5Q92316 86 aa1.13□□□□□ -2.23
NIC96YFR002W RPL36BO14455 100 aaKnown RBP1.13□□□□□ -2.23
NIC96YFR002W RPL36AP05745 100 aaPredicted RBP1.13□□□□□ -2.23
NIC96YFR002W COX23P38824 151 aa1.13□□□□□ -2.23
NIC96YFR002W HPA2Q06592 156 aa1.13□□□□□ -2.23
NIC96YFR002W DAD1Q12248 94 aa1.13□□□□□ -2.23
NIC96YFR002W FIT3Q08907 204 aa1.12□□□□□ -2.23
NIC96YFR002W YMR090WQ04304 227 aaKnown RBP1.12□□□□□ -2.23
NIC96YFR002W PAU19P0CE85 124 aa1.11□□□□□ -2.23
NIC96YFR002W UBC4P15731 148 aa1.11□□□□□ -2.23
NIC96YFR002W PAU3P25610 124 aa1.11□□□□□ -2.23
NIC96YFR002W GTT1P40582 234 aa1.11□□□□□ -2.23
NIC96YFR002W VPS55P47111 140 aa1.11□□□□□ -2.23
NIC96YFR002W SNN1P48232 102 aa1.11□□□□□ -2.23
NIC96YFR002W RSM19P53733 91 aaPredicted RBP1.11□□□□□ -2.23
NIC96YFR002W YOS1Q3E834 85 aa1.11□□□□□ -2.23
NIC96YFR002W LSM2P38203 95 aaKnown RBP1.11□□□□□ -2.23
NIC96YFR002W CWP2P43497 92 aa1.1□□□□□ -2.23
NIC96YFR002W HUR1P45820 110 aa1.1□□□□□ -2.23
NIC96YFR002W MHF2Q3E829 80 aa1.1□□□□□ -2.23
NIC96YFR002W YIL163CP40448 117 aa1.1□□□□□ -2.23
NIC96YFR002W EMC5P40540 141 aa1.1□□□□□ -2.23
NIC96YFR002W MSL1P40567 111 aaPredicted RBP1.1□□□□□ -2.23
NIC96YFR002W YLR285C-AQ3E771 56 aa1.1□□□□□ -2.23
NIC96YFR002W PFY1P07274 126 aa1.09□□□□□ -2.23
NIC96YFR002W YMR082CQ04276 118 aa1.09□□□□□ -2.23
NIC96YFR002W HMRA2P0CY13 119 aa1.09□□□□□ -2.24
NIC96YFR002W CYB5P40312 120 aa1.09□□□□□ -2.24
NIC96YFR002W SRB6P32570 121 aa1.08□□□□□ -2.24
NIC96YFR002W POR2P40478 281 aa1.08□□□□□ -2.24
NIC96YFR002W PAU5P43575 122 aa1.08□□□□□ -2.24
NIC96YFR002W COX12Q01519 83 aa1.08□□□□□ -2.24
NIC96YFR002W PAU16P35994 123 aa1.08□□□□□ -2.24
NIC96YFR002W PAU15P40585 124 aa1.08□□□□□ -2.24
NIC96YFR002W VMA21P41806 77 aa1.08□□□□□ -2.24
NIC96YFR002W COA6Q3E846 104 aa1.08□□□□□ -2.24
NIC96YFR002W ECM12O13529 151 aa1.07□□□□□ -2.24
NIC96YFR002W RPS22AP0C0W1 130 aaKnown RBP1.07□□□□□ -2.24
NIC96YFR002W SGF11Q03067 99 aa1.07□□□□□ -2.24
NIC96YFR002W YDR042CQ03205 200 aa1.07□□□□□ -2.24
NIC96YFR002W CCW12Q12127 133 aa1.07□□□□□ -2.24
NIC96YFR002W POC4Q12245 148 aaPredicted RBP1.07□□□□□ -2.24
NIC96YFR002W YBR013CP38215 129 aa1.06□□□□□ -2.24
NIC96YFR002W MIC27P50945 234 aa1.06□□□□□ -2.24
NIC96YFR002W YOR343CQ12484 108 aa1.06□□□□□ -2.24
NIC96YFR002W ENV10Q99382 181 aa1.06□□□□□ -2.24
NIC96YFR002W YOL013W-AP0C272 63 aaPredicted RBP1.06□□□□□ -2.24
NIC96YFR002W RPS22BQ3E7Y3 130 aaKnown RBP1.06□□□□□ -2.24
NIC96YFR002W RPL39P04650 51 aa1.05□□□□□ -2.24
NIC96YFR002W GCV3P39726 170 aaPredicted RBP1.05□□□□□ -2.24
NIC96YFR002W YNL122CP53921 115 aaPredicted RBP1.05□□□□□ -2.24
NIC96YFR002W IRC21Q04772 201 aa1.05□□□□□ -2.24
NIC96YFR002W YPR145C-AQ2V2P0 78 aa1.05□□□□□ -2.24
NIC96YFR002W YLR363W-AQ3E747 85 aa1.05□□□□□ -2.24
NIC96YFR002W RPS29AP41057 56 aaKnown RBP1.05□□□□□ -2.24
NIC96YFR002W YCR085WP25650 117 aa1.04□□□□□ -2.24
NIC96YFR002W RPA12P32529 125 aaKnown RBP1.04□□□□□ -2.24
NIC96YFR002W YAR064WP39563 99 aa1.04□□□□□ -2.24
NIC96YFR002W SPC1P46965 94 aa1.04□□□□□ -2.24
NIC96YFR002W ICY1Q04329 127 aa1.04□□□□□ -2.24
NIC96YFR002W YMR175W-AQ3E766 64 aa1.04□□□□□ -2.24
Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms