RNA–Protein interactions for RNA: YFL009W

CDC4, Transcript of F-box protein required for both the G1/S and G2/M phase transitions, yeastyeast

Gene CDC4, Length 2,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC4YFL009W NRM1P53718 249 aa3.82□□□□□ -1.8
CDC4YFL009W YOR032W-AQ8TGS1 66 aa3.82□□□□□ -1.8
CDC4YFL009W SPS100P13130 326 aa3.82□□□□□ -1.8
CDC4YFL009W AIM4P38305 123 aaPredicted RBP3.82□□□□□ -1.8
CDC4YFL009W PBP4Q07362 185 aaKnown RBP3.82□□□□□ -1.8
CDC4YFL009W MIG3P39943 394 aa3.81□□□□□ -1.8
CDC4YFL009W YJL027CP47063 138 aaPredicted RBP3.81□□□□□ -1.8
CDC4YFL009W YLR285C-AQ3E771 56 aa3.81□□□□□ -1.8
CDC4YFL009W TDA8Q6B2U8 126 aa3.81□□□□□ -1.8
CDC4YFL009W RPL39P04650 51 aa3.81□□□□□ -1.8
CDC4YFL009W SHU1P38751 150 aa3.81□□□□□ -1.8
CDC4YFL009W PEX22P39718 180 aa3.81□□□□□ -1.8
CDC4YFL009W YOL160WQ08321 113 aa3.81□□□□□ -1.8
CDC4YFL009W SPT4P32914 102 aaPredicted RBP3.8□□□□□ -1.8
CDC4YFL009W BPH1P25356 2167 aa3.8□□□□□ -1.8
CDC4YFL009W YAL065CO13511 128 aa3.79□□□□□ -1.8
CDC4YFL009W YJR146WP47174 117 aa3.79□□□□□ -1.8
CDC4YFL009W RGM1Q00453 211 aa3.79□□□□□ -1.8
CDC4YFL009W IRC21Q04772 201 aa3.79□□□□□ -1.8
CDC4YFL009W TAO3P40468 2376 aa3.79□□□□□ -1.8
CDC4YFL009W YDR182W-AQ3E796 67 aa3.79□□□□□ -1.8
CDC4YFL009W YBR209WP38311 105 aa3.78□□□□□ -1.8
CDC4YFL009W YFL019CP43576 117 aa3.78□□□□□ -1.8
CDC4YFL009W YNL234WP53857 426 aa3.78□□□□□ -1.8
CDC4YFL009W ATP20Q12233 115 aa3.78□□□□□ -1.8
CDC4YFL009W CSF1Q12150 2958 aa3.78□□□□□ -1.8
CDC4YFL009W YLR156WP0CE96 114 aa3.78□□□□□ -1.8
CDC4YFL009W YLR159WP0CE97 114 aa3.78□□□□□ -1.8
CDC4YFL009W YLR161WP0CE98 114 aa3.78□□□□□ -1.8
CDC4YFL009W ICY1Q04329 127 aa3.78□□□□□ -1.8
CDC4YFL009W YOR314WQ12506 109 aa3.78□□□□□ -1.8
CDC4YFL009W YOR020W-AQ3E824 90 aa3.78□□□□□ -1.8
CDC4YFL009W YLR236CA0A023PZG4 107 aa3.77□□□□□ -1.81
CDC4YFL009W ARC15P40518 154 aaRIP-Chip data3.77□□□□□ -1.81not detected
CDC4YFL009W GAT4P40569 121 aa3.77□□□□□ -1.81
CDC4YFL009W YGR025WP53216 100 aa3.77□□□□□ -1.81
CDC4YFL009W SRL1Q08673 210 aa3.77□□□□□ -1.81
CDC4YFL009W RPL16AP26784 199 aaKnown RBP3.77□□□□□ -1.81
CDC4YFL009W YJR107C-AP0CT86 78 aa3.76□□□□□ -1.81
CDC4YFL009W RSM18P40033 138 aa3.76□□□□□ -1.81
CDC4YFL009W ERI1P62651 68 aaKnown RBP3.76□□□□□ -1.81
CDC4YFL009W SPG4Q04438 115 aa3.76□□□□□ -1.81
CDC4YFL009W YKL065W-AQ2V2P2 73 aa3.76□□□□□ -1.81
CDC4YFL009W MIC10Q96VH5 97 aa3.76□□□□□ -1.81
CDC4YFL009W RPL15AP05748 204 aaKnown RBP3.76□□□□□ -1.81
CDC4YFL009W MRPL38P35996 138 aaPredicted RBP3.76□□□□□ -1.81
CDC4YFL009W YLR162WQ06235 118 aa3.76□□□□□ -1.81
CDC4YFL009W YOL085CQ99345 113 aa3.76□□□□□ -1.81
CDC4YFL009W ICS3P47034 131 aa3.75□□□□□ -1.81
CDC4YFL009W UTH1P36135 365 aa3.75□□□□□ -1.81
CDC4YFL009W KEG1P43614 200 aa3.75□□□□□ -1.81
CDC4YFL009W RPL36BO14455 100 aaKnown RBP3.74□□□□□ -1.81
CDC4YFL009W HHF1P02309 103 aaKnown RBP3.74□□□□□ -1.81
CDC4YFL009W RPL36AP05745 100 aaPredicted RBP3.74□□□□□ -1.81
CDC4YFL009W RPS23AP0CX29 145 aaKnown RBP3.74□□□□□ -1.81
CDC4YFL009W RPS23BP0CX30 145 aa3.74□□□□□ -1.81
CDC4YFL009W KRE9P39005 276 aa3.74□□□□□ -1.81
CDC4YFL009W YMR295CQ03559 197 aa3.74□□□□□ -1.81
CDC4YFL009W YBR200W-AQ3E755 54 aa3.73□□□□□ -1.81
CDC4YFL009W HFA1P32874 2273 aa3.73□□□□□ -1.81
CDC4YFL009W POR2P40478 281 aa3.73□□□□□ -1.81
CDC4YFL009W SMD1Q02260 146 aaPredicted RBP3.73□□□□□ -1.81
CDC4YFL009W RRT15Q3E811 62 aa3.73□□□□□ -1.81
CDC4YFL009W YHL005CP38752 130 aa3.72□□□□□ -1.81
CDC4YFL009W CRC1Q12289 327 aa3.72□□□□□ -1.81
CDC4YFL009W YOR034C-AQ3E735 80 aa3.72□□□□□ -1.81
CDC4YFL009W YGR121W-AQ3E816 71 aa3.72□□□□□ -1.81
CDC4YFL009W WWM1P43582 211 aaKnown RBP3.72□□□□□ -1.81
CDC4YFL009W YGL088WP53151 121 aa3.72□□□□□ -1.81
CDC4YFL009W MPC3P53311 146 aa3.72□□□□□ -1.81
CDC4YFL009W RPL26AP05743 127 aaKnown RBP3.71□□□□□ -1.82
CDC4YFL009W RPB9P27999 122 aa3.71□□□□□ -1.82
CDC4YFL009W ATP18P81450 59 aa3.71□□□□□ -1.82
CDC4YFL009W RPR2P40571 144 aa3.71□□□□□ -1.82
CDC4YFL009W YDR274CP87283 123 aa3.71□□□□□ -1.82
CDC4YFL009W IRA1P18963 3092 aa3.71□□□□□ -1.82
CDC4YFL009W RPL26BP53221 127 aaKnown RBP3.7□□□□□ -1.82
CDC4YFL009W YOR268CQ08734 132 aa3.7□□□□□ -1.82
CDC4YFL009W YOR381W-AQ3E804 55 aa3.7□□□□□ -1.82
CDC4YFL009W YEL008WP40001 126 aa3.7□□□□□ -1.82
CDC4YFL009W CCW12Q12127 133 aa3.7□□□□□ -1.82
CDC4YFL009W NOP10Q6Q547 58 aaPredicted RBP3.7□□□□□ -1.82
CDC4YFL009W SED1Q01589 338 aa3.69□□□□□ -1.82
CDC4YFL009W YPS5P53057 165 aa3.69□□□□□ -1.82
CDC4YFL009W YOL166W-AQ8TGJ1 51 aa3.69□□□□□ -1.82
CDC4YFL009W YFR035CP43608 114 aa3.68□□□□□ -1.82
CDC4YFL009W TOS8P53147 276 aa3.68□□□□□ -1.82
CDC4YFL009W YGR035W-AQ45U48 73 aa3.68□□□□□ -1.82
CDC4YFL009W EDC1P53080 175 aaPredicted RBP3.67□□□□□ -1.82
CDC4YFL009W COX14P39103 70 aa3.67□□□□□ -1.82
CDC4YFL009W YCL048W-AQ2V2Q2 79 aa3.67□□□□□ -1.82
CDC4YFL009W YHL037CP38733 133 aa3.66□□□□□ -1.82
CDC4YFL009W TDA2P40045 126 aa3.66□□□□□ -1.82
CDC4YFL009W YMR122CQ03879 124 aa3.66□□□□□ -1.82
CDC4YFL009W YOR011W-AQ3E807 68 aa3.66□□□□□ -1.82
CDC4YFL009W OST5Q92316 86 aa3.66□□□□□ -1.82
CDC4YFL009W YER188C-AP0C0V2 99 aa3.65□□□□□ -1.82
CDC4YFL009W SPG1P50088 95 aa3.65□□□□□ -1.82
CDC4YFL009W YML100W-AQ8TGT0 57 aa3.65□□□□□ -1.82
CDC4YFL009W YFR009W-AP0C5M9 85 aa3.65□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 22.5 ms