RNA–Protein interactions for RNA: YFL001W

DEG1, Transcript of tRNA:pseudouridine synthase, yeastyeast

Gene DEG1, Length 1,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DEG1YFL001W SCS22Q6Q595 175 aa2.71□□□□□ -1.98
DEG1YFL001W RPA12P32529 125 aaKnown RBP2.7□□□□□ -1.98
DEG1YFL001W SED1Q01589 338 aa2.7□□□□□ -1.98
DEG1YFL001W NAT5Q08689 176 aa2.7□□□□□ -1.98
DEG1YFL001W YDL157CQ12082 118 aa2.7□□□□□ -1.98
DEG1YFL001W YLR365WQ7LIF2 110 aa2.7□□□□□ -1.98
DEG1YFL001W RPS25BP0C0T4 108 aaKnown RBP2.69□□□□□ -1.98
DEG1YFL001W PAU23Q07987 124 aa2.69□□□□□ -1.98
DEG1YFL001W PAU17Q12370 124 aa2.69□□□□□ -1.98
DEG1YFL001W YNL146C-AQ3E7Z1 64 aa2.69□□□□□ -1.98
DEG1YFL001W YCR085WP25650 117 aa2.68□□□□□ -1.98
DEG1YFL001W YHL042WP38729 150 aa2.68□□□□□ -1.98
DEG1YFL001W YHR138CP38841 114 aaPredicted RBP2.68□□□□□ -1.98
DEG1YFL001W YFR035CP43608 114 aa2.68□□□□□ -1.98
DEG1YFL001W HUR1P45820 110 aa2.68□□□□□ -1.98
DEG1YFL001W YOR385WQ08909 290 aa2.68□□□□□ -1.98
DEG1YFL001W YLR363W-AQ3E747 85 aa2.68□□□□□ -1.98
DEG1YFL001W RPS25AQ3E792 108 aaPredicted RBP2.68□□□□□ -1.98
DEG1YFL001W CDC39P25655 2108 aaKnown RBP2.68□□□□□ -1.98
DEG1YFL001W RPL39P04650 51 aa2.68□□□□□ -1.98
DEG1YFL001W YKL044WP36092 106 aa2.68□□□□□ -1.98
DEG1YFL001W YAL064WP39711 94 aa2.68□□□□□ -1.98
DEG1YFL001W CWP2P43497 92 aa2.68□□□□□ -1.98
DEG1YFL001W PRM3Q08931 133 aa2.68□□□□□ -1.98
DEG1YFL001W ENV10Q99382 181 aa2.68□□□□□ -1.98
DEG1YFL001W MRP17P28778 131 aa2.67□□□□□ -1.98
DEG1YFL001W TOM6P33448 61 aa2.67□□□□□ -1.98
DEG1YFL001W YIR020CP40575 100 aa2.67□□□□□ -1.98
DEG1YFL001W SEN15Q04675 128 aa2.67□□□□□ -1.98
DEG1YFL001W YOR376W-AQ3E805 51 aa2.67□□□□□ -1.98
DEG1YFL001W MIC10Q96VH5 97 aa2.67□□□□□ -1.98
DEG1YFL001W YCL042WP25572 119 aa2.66□□□□□ -1.98
DEG1YFL001W ATX1P38636 73 aa2.66□□□□□ -1.98
DEG1YFL001W YEL008WP40001 126 aa2.66□□□□□ -1.98
DEG1YFL001W YLR296WQ05898 108 aa2.66□□□□□ -1.98
DEG1YFL001W YCL048W-AQ2V2Q2 79 aa2.66□□□□□ -1.98
DEG1YFL001W YPR108W-AQ3E7B3 70 aa2.66□□□□□ -1.98
DEG1YFL001W TAR1Q8TGM6 124 aa2.66□□□□□ -1.98
DEG1YFL001W YMR105W-AQ8TGS8 64 aa2.66□□□□□ -1.98
DEG1YFL001W Q0297Q9ZZV8 51 aa2.66□□□□□ -1.98
DEG1YFL001W DAD1Q12248 94 aa2.65□□□□□ -1.99
DEG1YFL001W YOR192C-CQ3E736 78 aa2.65□□□□□ -1.99
DEG1YFL001W TRA1P38811 3744 aa2.64□□□□□ -1.99
DEG1YFL001W QCR10P37299 77 aa2.64□□□□□ -1.99
DEG1YFL001W GCV3P39726 170 aaPredicted RBP2.64□□□□□ -1.99
DEG1YFL001W YDR042CQ03205 200 aa2.64□□□□□ -1.99
DEG1YFL001W YOL118CQ08259 102 aa2.64□□□□□ -1.99
DEG1YFL001W VMA9Q3E7B6 73 aa2.64□□□□□ -1.99
DEG1YFL001W PCC1Q3E833 88 aa2.64□□□□□ -1.99
DEG1YFL001W HUG1Q6Q5K6 68 aa2.64□□□□□ -1.99
DEG1YFL001W URA2P07259 2214 aaKnown RBP2.63□□□□□ -1.99
DEG1YFL001W PAU21P0CE86 164 aa2.63□□□□□ -1.99
DEG1YFL001W PAU22P0CE87 164 aa2.63□□□□□ -1.99
DEG1YFL001W FYV5P25585 152 aa2.63□□□□□ -1.99
DEG1YFL001W AVO2Q04749 426 aa2.63□□□□□ -1.99
DEG1YFL001W POC4Q12245 148 aaPredicted RBP2.63□□□□□ -1.99
DEG1YFL001W YNR034W-AQ3E841 98 aa2.63□□□□□ -1.99
DEG1YFL001W YIL134C-AQ45U18 67 aa2.63□□□□□ -1.99
DEG1YFL001W BPH1P25356 2167 aa2.62□□□□□ -1.99
DEG1YFL001W ROX3P25046 220 aa2.62□□□□□ -1.99
DEG1YFL001W ATG8P38182 117 aaRIP-Chip data2.62□□□□□ -1.99not detected
DEG1YFL001W YHL005CP38752 130 aa2.62□□□□□ -1.99
DEG1YFL001W YER187WP40102 141 aa2.62□□□□□ -1.99
DEG1YFL001W SOM1Q05676 74 aa2.62□□□□□ -1.99
DEG1YFL001W YLR146W-AQ2V2P1 62 aa2.62□□□□□ -1.99
DEG1YFL001W HSP10P38910 106 aa2.61□□□□□ -1.99
DEG1YFL001W RSM18P40033 138 aa2.61□□□□□ -1.99
DEG1YFL001W YMR175W-AQ3E766 64 aa2.61□□□□□ -1.99
DEG1YFL001W CMC4Q3E7A9 73 aa2.61□□□□□ -1.99
DEG1YFL001W COA3Q3E7B2 85 aa2.61□□□□□ -1.99
DEG1YFL001W YPL261CQ08976 102 aa2.6□□□□□ -1.99
DEG1YFL001W YDR119W-AQ2V2P9 66 aa2.6□□□□□ -1.99
DEG1YFL001W YGL258W-AQ3E740 77 aa2.6□□□□□ -1.99
DEG1YFL001W CCW14O13547 238 aa2.59□□□□□ -2
DEG1YFL001W YEL014CP39999 101 aa2.59□□□□□ -2
DEG1YFL001W YFL041W-AQ3E817 63 aa2.59□□□□□ -2
DEG1YFL001W YHR213WP0CI67 198 aa2.58□□□□□ -2
DEG1YFL001W YBR292CP38357 123 aa2.58□□□□□ -2
DEG1YFL001W MIC27P50945 234 aa2.58□□□□□ -2
DEG1YFL001W YIL102C-AQ2V2P5 75 aa2.58□□□□□ -2
DEG1YFL001W FPR2P32472 135 aa2.57□□□□□ -2
DEG1YFL001W YNL198CP40166 100 aa2.57□□□□□ -2
DEG1YFL001W YPR153WQ06537 140 aa2.57□□□□□ -2
DEG1YFL001W YDR381C-AQ3E6R5 114 aa2.57□□□□□ -2
DEG1YFL001W YPL038W-AQ3E7B4 63 aa2.57□□□□□ -2
DEG1YFL001W COA2Q3E823 68 aa2.57□□□□□ -2
DEG1YFL001W OST5Q92316 86 aa2.57□□□□□ -2
DEG1YFL001W UTP20P35194 2493 aaKnown RBP2.56□□□□□ -2
DEG1YFL001W NHP2P32495 156 aaPredicted RBP2.56□□□□□ -2
DEG1YFL001W LST8P41318 303 aa2.56□□□□□ -2
DEG1YFL001W COX12Q01519 83 aa2.56□□□□□ -2
DEG1YFL001W ICY1Q04329 127 aa2.56□□□□□ -2
DEG1YFL001W RRT15Q3E811 62 aa2.56□□□□□ -2
DEG1YFL001W QCR9P22289 66 aa2.55□□□□□ -2
DEG1YFL001W MRPL38P35996 138 aaPredicted RBP2.55□□□□□ -2
DEG1YFL001W YBL071CP38185 102 aa2.55□□□□□ -2
DEG1YFL001W PAU15P40585 124 aa2.54□□□□□ -2
DEG1YFL001W ICS3P47034 131 aa2.54□□□□□ -2
DEG1YFL001W YGL149WP53116 101 aa2.54□□□□□ -2
DEG1YFL001W YOR105WQ08504 108 aa2.54□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 65.3 ms