RNA–Protein interactions for RNA: YER118C

SHO1, Transcript of Transmembrane osmosensor for filamentous growth and HOG pathways, yeastyeast

Gene SHO1, Length 1,104 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHO1YER118C YBR219CP38317 127 aa4.03□□□□□ -1.76
SHO1YER118C YFL065CP43539 102 aa4.03□□□□□ -1.76
SHO1YER118C YPR203WQ08994 102 aa4.03□□□□□ -1.76
SHO1YER118C YMR175W-AQ3E766 64 aa4.03□□□□□ -1.76
SHO1YER118C UTP10P42945 1769 aaKnown RBP4.02□□□□□ -1.77
SHO1YER118C LSM2P38203 95 aaKnown RBP4.02□□□□□ -1.77
SHO1YER118C IMP2P46972 177 aa4.02□□□□□ -1.77
SHO1YER118C YMR321CQ04898 105 aa4.02□□□□□ -1.77
SHO1YER118C POC4Q12245 148 aaPredicted RBP4.02□□□□□ -1.77
SHO1YER118C COA3Q3E7B2 85 aa4.01□□□□□ -1.77
SHO1YER118C RPA12P32529 125 aaKnown RBP4□□□□□ -1.77
SHO1YER118C YIL163CP40448 117 aa4□□□□□ -1.77
SHO1YER118C COA4Q05809 96 aa4□□□□□ -1.77
SHO1YER118C LSM6Q06406 86 aaKnown RBP4□□□□□ -1.77
SHO1YER118C YHR213W-AQ8TGT4 77 aa4□□□□□ -1.77
SHO1YER118C YCL042WP25572 119 aa3.99□□□□□ -1.77
SHO1YER118C YNL146C-AQ3E7Z1 64 aa3.99□□□□□ -1.77
SHO1YER118C YHR086W-AQ3E746 53 aa3.98□□□□□ -1.77
SHO1YER118C YCR095W-AQ3E787 52 aa3.98□□□□□ -1.77
SHO1YER118C ICS3P47034 131 aa3.97□□□□□ -1.77
SHO1YER118C MHF2Q3E829 80 aa3.97□□□□□ -1.77
SHO1YER118C YSF3P0C074 85 aaPredicted RBP3.96□□□□□ -1.78
SHO1YER118C YCL048W-AQ2V2Q2 79 aa3.96□□□□□ -1.78
SHO1YER118C YOL118CQ08259 102 aa3.95□□□□□ -1.78
SHO1YER118C FIG2P25653 1609 aa3.95□□□□□ -1.78
SHO1YER118C RPS22BQ3E7Y3 130 aaKnown RBP3.94□□□□□ -1.78
SHO1YER118C MYO1P08964 1928 aa3.91□□□□□ -1.78
SHO1YER118C FAS2P19097 1887 aaKnown RBP3.91□□□□□ -1.78
SHO1YER118C TOM6P33448 61 aa3.91□□□□□ -1.78
SHO1YER118C YHL037CP38733 133 aa3.91□□□□□ -1.78
SHO1YER118C VPS55P47111 140 aa3.91□□□□□ -1.78
SHO1YER118C SNA2P56508 79 aa3.91□□□□□ -1.78
SHO1YER118C PMD1P32634 1753 aa3.9□□□□□ -1.79
SHO1YER118C NHP2P32495 156 aaPredicted RBP3.9□□□□□ -1.79
SHO1YER118C HKR1P41809 1802 aa3.9□□□□□ -1.79
SHO1YER118C IRC21Q04772 201 aa3.89□□□□□ -1.79
SHO1YER118C CCW12Q12127 133 aa3.89□□□□□ -1.79
SHO1YER118C FLO1P32768 1537 aa3.89□□□□□ -1.79
SHO1YER118C PAI3P01094 68 aa3.88□□□□□ -1.79
SHO1YER118C SPC1P46965 94 aa3.88□□□□□ -1.79
SHO1YER118C MRP17P28778 131 aa3.86□□□□□ -1.79
SHO1YER118C MRPL38P35996 138 aaPredicted RBP3.86□□□□□ -1.79
SHO1YER118C GIS2P53849 153 aaKnown RBP RIP-Chip data3.86□□□□□ -1.79not detected
SHO1YER118C YGL041C-BQ3E750 60 aa3.86□□□□□ -1.79
SHO1YER118C CDC39P25655 2108 aaKnown RBP3.85□□□□□ -1.79
SHO1YER118C CCW14O13547 238 aa3.85□□□□□ -1.79
SHO1YER118C YBL071CP38185 102 aa3.85□□□□□ -1.79
SHO1YER118C PAU6P0CE90 120 aa3.84□□□□□ -1.79
SHO1YER118C PAU18P0CE91 120 aa3.84□□□□□ -1.79
SHO1YER118C YDR119W-AQ2V2P9 66 aa3.83□□□□□ -1.8
SHO1YER118C YBR013CP38215 129 aa3.82□□□□□ -1.8
SHO1YER118C LCL2Q08045 131 aa3.82□□□□□ -1.8
SHO1YER118C YPR145C-AQ2V2P0 78 aa3.82□□□□□ -1.8
SHO1YER118C MRPS12P53732 153 aa3.81□□□□□ -1.8
SHO1YER118C YOR343CQ12484 108 aa3.81□□□□□ -1.8
SHO1YER118C YDR381C-AQ3E6R5 114 aa3.81□□□□□ -1.8
SHO1YER118C MIC27P50945 234 aa3.8□□□□□ -1.8
SHO1YER118C LAA1P39526 2014 aa3.79□□□□□ -1.8
SHO1YER118C YGR240C-AQ3E786 66 aa3.79□□□□□ -1.8
SHO1YER118C YHR214C-DP0CX93 97 aa3.78□□□□□ -1.8
SHO1YER118C MRX7P53869 86 aa3.78□□□□□ -1.8
SHO1YER118C YPL038W-AQ3E7B4 63 aa3.78□□□□□ -1.8
SHO1YER118C YDR210WQ03482 75 aa3.77□□□□□ -1.81
SHO1YER118C YJL009WP47078 108 aa3.76□□□□□ -1.81
SHO1YER118C TOM1Q03280 3268 aa3.74□□□□□ -1.81
SHO1YER118C YNL122CP53921 115 aaPredicted RBP3.74□□□□□ -1.81
SHO1YER118C YBR292CP38357 123 aa3.73□□□□□ -1.81
SHO1YER118C ATX1P38636 73 aa3.73□□□□□ -1.81
SHO1YER118C YNR034W-AQ3E841 98 aa3.73□□□□□ -1.81
SHO1YER118C UBR2Q07963 1872 aa3.73□□□□□ -1.81
SHO1YER118C YFR010W-AP0C5N0 62 aa3.72□□□□□ -1.81
SHO1YER118C YHR212W-AP0CX91 67 aa3.72□□□□□ -1.81
SHO1YER118C SWM2P40342 146 aa3.72□□□□□ -1.81
SHO1YER118C COX12Q01519 83 aa3.72□□□□□ -1.81
SHO1YER118C PAU1P0CE88 120 aa3.7□□□□□ -1.82
SHO1YER118C PAU14P0CE89 120 aa3.7□□□□□ -1.82
SHO1YER118C PAU8P0CE92 120 aa3.7□□□□□ -1.82
SHO1YER118C PAU11P0CE93 120 aa3.7□□□□□ -1.82
SHO1YER118C PAU13P38725 120 aa3.7□□□□□ -1.82
SHO1YER118C AIM19P40502 157 aa3.7□□□□□ -1.82
SHO1YER118C PAU4P53427 120 aa3.7□□□□□ -1.82
SHO1YER118C PAU10Q03050 120 aa3.7□□□□□ -1.82
SHO1YER118C PAU9Q3E770 120 aa3.7□□□□□ -1.82
SHO1YER118C FAB1P34756 2278 aa3.69□□□□□ -1.82
SHO1YER118C BSC4P53841 131 aa3.69□□□□□ -1.82
SHO1YER118C AQY2P0CD90 149 aa3.68□□□□□ -1.82
SHO1YER118C MRPL31P14063 131 aaPredicted RBP3.68□□□□□ -1.82
SHO1YER118C PDX3P38075 228 aaKnown RBP3.68□□□□□ -1.82
SHO1YER118C MPC2P38857 129 aa3.68□□□□□ -1.82
SHO1YER118C YOR314WQ12506 109 aa3.68□□□□□ -1.82
SHO1YER118C CYR1P08678 2026 aaKnown RBP3.68□□□□□ -1.82
SHO1YER118C YER188C-AP0C0V2 99 aa3.67□□□□□ -1.82
SHO1YER118C PAU23Q07987 124 aa3.67□□□□□ -1.82
SHO1YER118C PAU17Q12370 124 aa3.67□□□□□ -1.82
SHO1YER118C YOR105WQ08504 108 aa3.66□□□□□ -1.82
SHO1YER118C RPS11AP0CX47 156 aaKnown RBP3.65□□□□□ -1.83
SHO1YER118C RPS11BP0CX48 156 aaKnown RBP3.65□□□□□ -1.83
SHO1YER118C YKL065W-AQ2V2P2 73 aa3.65□□□□□ -1.83
SHO1YER118C SSS1P35179 80 aa3.64□□□□□ -1.83
SHO1YER118C PAU20Q08322 120 aa3.64□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 6.7 ms