RNA–Protein interactions for RNA: YER096W

SHC1, Transcript of Sporulation-specific activator of Chs3p (chitin synthase III), yeastyeast

Gene SHC1, Length 1,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHC1YER096W SVP26P38869 228 aa5.45□□□□□ -1.54
SHC1YER096W YAL064WP39711 94 aa5.45□□□□□ -1.54
SHC1YER096W ENV10Q99382 181 aa5.45□□□□□ -1.54
SHC1YER096W MDN1Q12019 4910 aaKnown RBP5.44□□□□□ -1.54
SHC1YER096W RTC6O14464 93 aa5.43□□□□□ -1.54
SHC1YER096W RPC10P40422 70 aa5.43□□□□□ -1.54
SHC1YER096W CWC27Q02770 301 aa5.43□□□□□ -1.54
SHC1YER096W ELC1Q03071 99 aa5.43□□□□□ -1.54
SHC1YER096W VTS1Q08831 523 aaKnown RBP RIP-Chip data5.43□□□□□ -1.54not detected
SHC1YER096W YPR010C-AA5Z2X5 72 aa5.43□□□□□ -1.54
SHC1YER096W TOA2P32774 122 aa5.43□□□□□ -1.54
SHC1YER096W MBF1O14467 151 aaKnown RBP5.42□□□□□ -1.54
SHC1YER096W YPR170W-BP0C5R9 85 aa5.42□□□□□ -1.54
SHC1YER096W RUB1Q03919 77 aa5.42□□□□□ -1.54
SHC1YER096W YPR195CQ06594 109 aa5.42□□□□□ -1.54
SHC1YER096W QCR8P08525 94 aa5.41□□□□□ -1.54
SHC1YER096W YMR175W-AQ3E766 64 aa5.41□□□□□ -1.54
SHC1YER096W ADH1P00330 348 aaKnown RBP5.4□□□□□ -1.54
SHC1YER096W YLR296WQ05898 108 aa5.39□□□□□ -1.55
SHC1YER096W CPR1P14832 162 aaKnown RBP5.38□□□□□ -1.55
SHC1YER096W UIP3P39547 235 aa5.38□□□□□ -1.55
SHC1YER096W YNL198CP40166 100 aa5.38□□□□□ -1.55
SHC1YER096W CWP2P43497 92 aa5.38□□□□□ -1.55
SHC1YER096W YML079WQ03629 201 aa5.38□□□□□ -1.55
SHC1YER096W PPT2Q12036 173 aa5.38□□□□□ -1.55
SHC1YER096W YLL006W-AQ3E814 58 aa5.38□□□□□ -1.55
SHC1YER096W CDC43P18898 376 aa5.38□□□□□ -1.55
SHC1YER096W YKL023C-AQ2V2P3 75 aa5.38□□□□□ -1.55
SHC1YER096W UBC11P52492 156 aa5.37□□□□□ -1.55
SHC1YER096W YAR023CD6VPM8 179 aa5.36□□□□□ -1.55
SHC1YER096W PAI3P01094 68 aa5.36□□□□□ -1.55
SHC1YER096W YER181CP40097 107 aa5.36□□□□□ -1.55
SHC1YER096W YDL241WQ07738 123 aa5.35□□□□□ -1.55
SHC1YER096W YIL102C-AQ2V2P5 75 aa5.35□□□□□ -1.55
SHC1YER096W STF1P01098 86 aa5.34□□□□□ -1.55
SHC1YER096W RPP2AP05319 106 aaKnown RBP5.33□□□□□ -1.56
SHC1YER096W ARO2P28777 376 aaKnown RBP5.33□□□□□ -1.56
SHC1YER096W SMP1P38128 452 aa5.33□□□□□ -1.56
SHC1YER096W YIA6P40556 373 aa5.33□□□□□ -1.56
SHC1YER096W AQY2P0CD90 149 aa5.32□□□□□ -1.56
SHC1YER096W MVB12P42939 101 aa5.32□□□□□ -1.56
SHC1YER096W IGD1P43598 195 aa5.32□□□□□ -1.56
SHC1YER096W LSM6Q06406 86 aaKnown RBP5.32□□□□□ -1.56
SHC1YER096W EOS1P53938 366 aa5.31□□□□□ -1.56
SHC1YER096W RGM1Q00453 211 aa5.31□□□□□ -1.56
SHC1YER096W YOR034C-AQ3E735 80 aa5.31□□□□□ -1.56
SHC1YER096W SNA2P56508 79 aa5.3□□□□□ -1.56
SHC1YER096W SMD1Q02260 146 aaPredicted RBP5.3□□□□□ -1.56
SHC1YER096W HPA2Q06592 156 aa5.3□□□□□ -1.56
SHC1YER096W YLR415CO13578 112 aa5.29□□□□□ -1.56
SHC1YER096W ANB1P19211 157 aa5.29□□□□□ -1.56
SHC1YER096W YFL019CP43576 117 aa5.28□□□□□ -1.56
SHC1YER096W YPL229WQ99395 206 aa5.28□□□□□ -1.56
SHC1YER096W RPL29P05747 59 aaPredicted RBP5.28□□□□□ -1.56
SHC1YER096W YHR130CP38834 111 aa5.28□□□□□ -1.56
SHC1YER096W ABF2Q02486 183 aa5.28□□□□□ -1.56
SHC1YER096W YBL039W-BP0C268 59 aa5.27□□□□□ -1.57
SHC1YER096W NHP2P32495 156 aaPredicted RBP5.27□□□□□ -1.57
SHC1YER096W YDR029WQ12111 104 aa5.27□□□□□ -1.57
SHC1YER096W YOR020W-AQ3E824 90 aa5.27□□□□□ -1.57
SHC1YER096W YDR034C-AP0C289 58 aa5.26□□□□□ -1.57
SHC1YER096W PEX22P39718 180 aa5.26□□□□□ -1.57
SHC1YER096W AIM19P40502 157 aa5.26□□□□□ -1.57
SHC1YER096W KNH1P50112 268 aa5.26□□□□□ -1.57
SHC1YER096W IRC21Q04772 201 aa5.26□□□□□ -1.57
SHC1YER096W LCL2Q08045 131 aa5.26□□□□□ -1.57
SHC1YER096W YNL162W-AQ3E7A8 72 aa5.26□□□□□ -1.57
SHC1YER096W HYP2P23301 157 aaKnown RBP5.25□□□□□ -1.57
SHC1YER096W YPL257WQ08974 193 aa5.23□□□□□ -1.57
SHC1YER096W YLR307C-AQ3E825 87 aa5.23□□□□□ -1.57
SHC1YER096W UBC4P15731 148 aa5.22□□□□□ -1.57
SHC1YER096W COX10P21592 462 aa5.22□□□□□ -1.57
SHC1YER096W ICY1Q04329 127 aa5.22□□□□□ -1.57
SHC1YER096W GAT4P40569 121 aa5.21□□□□□ -1.58
SHC1YER096W HUR1P45820 110 aa5.21□□□□□ -1.58
SHC1YER096W Q0032Q9ZZX7 96 aa5.21□□□□□ -1.58
SHC1YER096W YLR236CA0A023PZG4 107 aa5.2□□□□□ -1.58
SHC1YER096W ECM12O13529 151 aa5.2□□□□□ -1.58
SHC1YER096W MRPL24P36525 258 aaPredicted RBP5.2□□□□□ -1.58
SHC1YER096W YAR1P46683 200 aa5.18□□□□□ -1.58
SHC1YER096W MPC3P53311 146 aa5.18□□□□□ -1.58
SHC1YER096W YPL080CQ02826 108 aa5.18□□□□□ -1.58
SHC1YER096W MSA2P36157 363 aa5.18□□□□□ -1.58
SHC1YER096W YBR230W-AQ3E762 66 aa5.18□□□□□ -1.58
SHC1YER096W YOR304C-AO14468 76 aa5.17□□□□□ -1.58
SHC1YER096W DSE2P38844 325 aa5.17□□□□□ -1.58
SHC1YER096W YGL041C-BQ3E750 60 aa5.16□□□□□ -1.58
SHC1YER096W YGL193CP53097 103 aa5.15□□□□□ -1.58
SHC1YER096W YJL127C-BQ3E828 52 aa5.13□□□□□ -1.59
SHC1YER096W RPL26AP05743 127 aaKnown RBP5.13□□□□□ -1.59
SHC1YER096W YLR156WP0CE96 114 aa5.13□□□□□ -1.59
SHC1YER096W YLR159WP0CE97 114 aa5.13□□□□□ -1.59
SHC1YER096W YLR161WP0CE98 114 aa5.13□□□□□ -1.59
SHC1YER096W RPL26BP53221 127 aaKnown RBP5.13□□□□□ -1.59
SHC1YER096W SLO1Q3E784 85 aa5.13□□□□□ -1.59
SHC1YER096W YNL042W-BQ3E7Z2 85 aa5.13□□□□□ -1.59
SHC1YER096W RPA12P32529 125 aaKnown RBP5.12□□□□□ -1.59
SHC1YER096W FYV5P25585 152 aa5.11□□□□□ -1.59
SHC1YER096W GIS2P53849 153 aaKnown RBP RIP-Chip data5.1□□□□□ -1.59not detected
SHC1YER096W YJR107C-AP0CT86 78 aa5.07□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 24.1 ms