RNA–Protein interactions for RNA: YER012W

PRE1, Transcript of Beta 4 subunit of the 20S proteasome, yeastyeast

Gene PRE1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE1YER012W YLR156WP0CE96 114 aa1.56□□□□□ -2.16
PRE1YER012W YLR159WP0CE97 114 aa1.56□□□□□ -2.16
PRE1YER012W YLR161WP0CE98 114 aa1.56□□□□□ -2.16
PRE1YER012W HMRA1P0CY11 126 aa1.56□□□□□ -2.16
PRE1YER012W PAU3P25610 124 aa1.56□□□□□ -2.16
PRE1YER012W YKR070WP36151 352 aaKnown RBP1.56□□□□□ -2.16
PRE1YER012W ATG8P38182 117 aaRIP-Chip data1.56□□□□□ -2.16not detected
PRE1YER012W PAU15P40585 124 aa1.56□□□□□ -2.16
PRE1YER012W COA3Q3E7B2 85 aa1.56□□□□□ -2.16
PRE1YER012W YPR010C-AA5Z2X5 72 aa1.55□□□□□ -2.16
PRE1YER012W NHP6AP11632 93 aaKnown RBP1.55□□□□□ -2.16
PRE1YER012W ACP1P32463 125 aa1.55□□□□□ -2.16
PRE1YER012W PAU7P39545 55 aa1.55□□□□□ -2.16
PRE1YER012W SEC72P39742 193 aaKnown RBP1.55□□□□□ -2.16
PRE1YER012W AIM19P40502 157 aa1.55□□□□□ -2.16
PRE1YER012W PAU5P43575 122 aa1.55□□□□□ -2.16
PRE1YER012W YML108WQ03759 105 aa1.55□□□□□ -2.16
PRE1YER012W YHR086W-AQ3E746 53 aa1.55□□□□□ -2.16
PRE1YER012W HMRA2P0CY13 119 aa1.54□□□□□ -2.16
PRE1YER012W ATP15P21306 62 aa1.54□□□□□ -2.16
PRE1YER012W CNB1P25296 175 aa1.54□□□□□ -2.16
PRE1YER012W SRB6P32570 121 aa1.54□□□□□ -2.16
PRE1YER012W PAU16P35994 123 aa1.54□□□□□ -2.16
PRE1YER012W HSP10P38910 106 aa1.54□□□□□ -2.16
PRE1YER012W NSE4P43124 402 aa1.54□□□□□ -2.16
PRE1YER012W WIP1Q2V2P8 89 aa1.54□□□□□ -2.16
PRE1YER012W YFR032C-BQ8TGU2 87 aa1.54□□□□□ -2.16
PRE1YER012W GSP1P32835 219 aaKnown RBP1.53□□□□□ -2.16
PRE1YER012W GSP2P32836 220 aaKnown RBP1.53□□□□□ -2.16
PRE1YER012W YEL067CP39978 195 aa1.53□□□□□ -2.16
PRE1YER012W VTC1P40046 129 aaRIP-Chip data1.53□□□□□ -2.16not detected
PRE1YER012W YER134CP40081 178 aa1.53□□□□□ -2.16
PRE1YER012W CWP2P43497 92 aa1.53□□□□□ -2.16
PRE1YER012W TOS6P48560 102 aa1.53□□□□□ -2.16
PRE1YER012W MRPS12P53732 153 aa1.53□□□□□ -2.16
PRE1YER012W RPL27BP0C2H7 136 aaKnown RBP1.52□□□□□ -2.17
PRE1YER012W APS2Q00381 147 aa1.52□□□□□ -2.17
PRE1YER012W YOR008C-AQ3E7B9 74 aa1.52□□□□□ -2.17
PRE1YER012W ENV10Q99382 181 aa1.52□□□□□ -2.17
PRE1YER012W ECM12O13529 151 aa1.51□□□□□ -2.17
PRE1YER012W HYP2P23301 157 aaKnown RBP1.51□□□□□ -2.17
PRE1YER012W YGL149WP53116 101 aa1.51□□□□□ -2.17
PRE1YER012W YNL190WP53872 204 aa1.51□□□□□ -2.17
PRE1YER012W CYT2Q00873 224 aa1.51□□□□□ -2.17
PRE1YER012W YDR042CQ03205 200 aa1.51□□□□□ -2.17
PRE1YER012W YMR175W-AQ3E766 64 aa1.51□□□□□ -2.17
PRE1YER012W AQY2P0CD90 149 aa1.5□□□□□ -2.17
PRE1YER012W FYV4P38783 130 aaPredicted RBP1.5□□□□□ -2.17
PRE1YER012W YGL193CP53097 103 aa1.5□□□□□ -2.17
PRE1YER012W YNR077CP53758 84 aa1.5□□□□□ -2.17
PRE1YER012W AIM11P87275 137 aa1.5□□□□□ -2.17
PRE1YER012W PKR1Q03880 122 aaKnown RBP1.5□□□□□ -2.17
PRE1YER012W RPS22BQ3E7Y3 130 aaKnown RBP1.5□□□□□ -2.17
PRE1YER012W SHU1P38751 150 aa1.49□□□□□ -2.17
PRE1YER012W MVB12P42939 101 aa1.49□□□□□ -2.17
PRE1YER012W HHO1P53551 258 aa1.49□□□□□ -2.17
PRE1YER012W POP3P53833 195 aaPredicted RBP1.49□□□□□ -2.17
PRE1YER012W CMC2Q3E7A4 109 aa1.49□□□□□ -2.17
PRE1YER012W YLL006W-AQ3E814 58 aa1.49□□□□□ -2.17
PRE1YER012W SCS22Q6Q595 175 aa1.49□□□□□ -2.17
PRE1YER012W BET1P22804 142 aa1.48□□□□□ -2.17
PRE1YER012W YMR103CQ04436 120 aa1.48□□□□□ -2.17
PRE1YER012W YDL241WQ07738 123 aa1.48□□□□□ -2.17
PRE1YER012W TSC3Q3E790 80 aa1.48□□□□□ -2.17
PRE1YER012W UBC4P15731 148 aa1.47□□□□□ -2.17
PRE1YER012W MRPL11P36521 249 aaPredicted RBP1.47□□□□□ -2.17
PRE1YER012W YPL073CP40323 161 aa1.47□□□□□ -2.17
PRE1YER012W YFL019CP43576 117 aa1.47□□□□□ -2.17
PRE1YER012W ARL3Q02804 198 aa1.47□□□□□ -2.17
PRE1YER012W SEN15Q04675 128 aa1.47□□□□□ -2.17
PRE1YER012W YKL023C-AQ2V2P3 75 aa1.47□□□□□ -2.17
PRE1YER012W IGO2Q9P305 131 aa1.47□□□□□ -2.17
PRE1YER012W Q0032Q9ZZX7 96 aa1.47□□□□□ -2.17
PRE1YER012W YBL039W-BP0C268 59 aa1.46□□□□□ -2.18
PRE1YER012W YKR041WP36134 250 aa1.46□□□□□ -2.18
PRE1YER012W YAR029WP39549 74 aa1.46□□□□□ -2.18
PRE1YER012W YPL261CQ08976 102 aa1.46□□□□□ -2.18
PRE1YER012W MBF1O14467 151 aaKnown RBP1.45□□□□□ -2.18
PRE1YER012W UGX2P32772 223 aa1.45□□□□□ -2.18
PRE1YER012W YBR027CP38220 110 aa1.45□□□□□ -2.18
PRE1YER012W RPL37BP51402 88 aaKnown RBP1.45□□□□□ -2.18
PRE1YER012W YNL184CP53876 108 aa1.45□□□□□ -2.18
PRE1YER012W YOR034C-AQ3E735 80 aa1.45□□□□□ -2.18
PRE1YER012W YGL041C-BQ3E750 60 aa1.45□□□□□ -2.18
PRE1YER012W DSE2P38844 325 aa1.44□□□□□ -2.18
PRE1YER012W KNH1P50112 268 aa1.44□□□□□ -2.18
PRE1YER012W ERV14P53173 138 aa1.44□□□□□ -2.18
PRE1YER012W RPL29P05747 59 aaPredicted RBP1.43□□□□□ -2.18
PRE1YER012W SEC11P15367 167 aa1.43□□□□□ -2.18
PRE1YER012W GTT1P40582 234 aa1.43□□□□□ -2.18
PRE1YER012W MPC3P53311 146 aa1.43□□□□□ -2.18
PRE1YER012W BSC4P53841 131 aa1.43□□□□□ -2.18
PRE1YER012W HPA2Q06592 156 aa1.43□□□□□ -2.18
PRE1YER012W YBR230W-AQ3E762 66 aa1.43□□□□□ -2.18
PRE1YER012W DDR2P89113 61 aa1.42□□□□□ -2.18
PRE1YER012W YML079WQ03629 201 aa1.42□□□□□ -2.18
PRE1YER012W YHR007C-AQ07074 71 aa1.42□□□□□ -2.18
PRE1YER012W YOL014WQ08110 124 aa1.42□□□□□ -2.18
PRE1YER012W MRPL44P19956 98 aa1.41□□□□□ -2.18
PRE1YER012W SPG1P50088 95 aa1.41□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms