RNA–Protein interactions for RNA: YDL126C

CDC48, Transcript of AAA ATPase, yeastyeast

Gene CDC48, Length 2,508 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC48YDL126C ATP15P21306 62 aa3.45□□□□□ -1.86
CDC48YDL126C MSA2P36157 363 aa3.45□□□□□ -1.86
CDC48YDL126C TDA8Q6B2U8 126 aa3.45□□□□□ -1.86
CDC48YDL126C PIS1P06197 220 aaKnown RBP3.44□□□□□ -1.86
CDC48YDL126C VTC1P40046 129 aaRIP-Chip data3.44□□□□□ -1.86not detected
CDC48YDL126C PIR5P46999 287 aa3.44□□□□□ -1.86
CDC48YDL126C MGR2Q02889 113 aa3.44□□□□□ -1.86
CDC48YDL126C PFY1P07274 126 aa3.44□□□□□ -1.86
CDC48YDL126C YDR182W-AQ3E796 67 aa3.44□□□□□ -1.86
CDC48YDL126C MPC2P38857 129 aa3.43□□□□□ -1.86
CDC48YDL126C COX14P39103 70 aa3.43□□□□□ -1.86
CDC48YDL126C YBR056W-AI2HB52 66 aa3.43□□□□□ -1.86
CDC48YDL126C RPB9P27999 122 aa3.43□□□□□ -1.86
CDC48YDL126C HUR1P45820 110 aa3.43□□□□□ -1.86
CDC48YDL126C YMR244WQ04018 355 aa3.43□□□□□ -1.86
CDC48YDL126C IRC23Q08416 157 aa3.43□□□□□ -1.86
CDC48YDL126C FYV12Q08559 129 aa3.43□□□□□ -1.86
CDC48YDL126C YBL008W-AQ3E821 79 aa3.43□□□□□ -1.86
CDC48YDL126C YMR105W-AQ8TGS8 64 aa3.43□□□□□ -1.86
CDC48YDL126C MIC10Q96VH5 97 aa3.43□□□□□ -1.86
CDC48YDL126C YMR316C-AI2HB70 103 aa3.42□□□□□ -1.86
CDC48YDL126C YHR213WP0CI67 198 aa3.42□□□□□ -1.86
CDC48YDL126C MRPL31P14063 131 aaPredicted RBP3.42□□□□□ -1.86
CDC48YDL126C DCV1P43595 202 aa3.42□□□□□ -1.86
CDC48YDL126C YIL014C-AQ02598 104 aa3.42□□□□□ -1.86
CDC48YDL126C YOR314WQ12506 109 aa3.42□□□□□ -1.86
CDC48YDL126C YGL258W-AQ3E740 77 aa3.42□□□□□ -1.86
CDC48YDL126C YER187WP40102 141 aa3.42□□□□□ -1.86
CDC48YDL126C ECM19Q06011 112 aa3.42□□□□□ -1.86
CDC48YDL126C PPT2Q12036 173 aa3.42□□□□□ -1.86
CDC48YDL126C YAL065CO13511 128 aa3.41□□□□□ -1.86
CDC48YDL126C DDR48P18899 430 aaKnown RBP3.41□□□□□ -1.86
CDC48YDL126C HSP12P22943 109 aaKnown RBP3.41□□□□□ -1.86
CDC48YDL126C YAL064WP39711 94 aa3.41□□□□□ -1.86
CDC48YDL126C RSM18P40033 138 aa3.41□□□□□ -1.86
CDC48YDL126C TOS6P48560 102 aa3.41□□□□□ -1.86
CDC48YDL126C YHR022CP38763 256 aa3.4□□□□□ -1.86
CDC48YDL126C NCA3P46955 337 aa3.4□□□□□ -1.86
CDC48YDL126C YMR007WQ03675 126 aa3.4□□□□□ -1.86
CDC48YDL126C YHP1Q04116 353 aa3.4□□□□□ -1.86
CDC48YDL126C VPS55P47111 140 aa3.4□□□□□ -1.87
CDC48YDL126C YCL048W-AQ2V2Q2 79 aa3.4□□□□□ -1.87
CDC48YDL126C YKR045CP36138 183 aa3.39□□□□□ -1.87
CDC48YDL126C KRE9P39005 276 aa3.39□□□□□ -1.87
CDC48YDL126C YOL085CQ99345 113 aa3.39□□□□□ -1.87
CDC48YDL126C HHF1P02309 103 aaKnown RBP3.38□□□□□ -1.87
CDC48YDL126C YLR156WP0CE96 114 aa3.38□□□□□ -1.87
CDC48YDL126C YLR159WP0CE97 114 aa3.38□□□□□ -1.87
CDC48YDL126C YLR161WP0CE98 114 aa3.38□□□□□ -1.87
CDC48YDL126C AIM4P38305 123 aaPredicted RBP3.38□□□□□ -1.87
CDC48YDL126C LST8P41318 303 aa3.38□□□□□ -1.87
CDC48YDL126C YPL261CQ08976 102 aa3.38□□□□□ -1.87
CDC48YDL126C YFR035CP43608 114 aa3.37□□□□□ -1.87
CDC48YDL126C ICY1Q04329 127 aa3.37□□□□□ -1.87
CDC48YDL126C YLR194CQ05777 254 aa3.37□□□□□ -1.87
CDC48YDL126C YOL014WQ08110 124 aa3.37□□□□□ -1.87
CDC48YDL126C YIL163CP40448 117 aa3.37□□□□□ -1.87
CDC48YDL126C YNR077CP53758 84 aa3.37□□□□□ -1.87
CDC48YDL126C YMR295CQ03559 197 aa3.37□□□□□ -1.87
CDC48YDL126C YLR162WQ06235 118 aa3.36□□□□□ -1.87
CDC48YDL126C YOR268CQ08734 132 aa3.36□□□□□ -1.87
CDC48YDL126C PRM7Q12459 698 aa3.36□□□□□ -1.87
CDC48YDL126C YLR342W-AQ3E810 57 aa3.36□□□□□ -1.87
CDC48YDL126C YML100W-AQ8TGT0 57 aa3.36□□□□□ -1.87
CDC48YDL126C YBL071CP38185 102 aa3.36□□□□□ -1.87
CDC48YDL126C MIG3P39943 394 aa3.36□□□□□ -1.87
CDC48YDL126C MPC3P53311 146 aa3.36□□□□□ -1.87
CDC48YDL126C FIT2Q08906 153 aa3.36□□□□□ -1.87
CDC48YDL126C YDR246W-AQ3E763 66 aa3.36□□□□□ -1.87
CDC48YDL126C IRA1P18963 3092 aa3.35□□□□□ -1.87
CDC48YDL126C RPL36BO14455 100 aaKnown RBP3.35□□□□□ -1.87
CDC48YDL126C RPL36AP05745 100 aaPredicted RBP3.35□□□□□ -1.87
CDC48YDL126C YER135CP40082 130 aa3.35□□□□□ -1.87
CDC48YDL126C PBA1Q05778 276 aa3.35□□□□□ -1.87
CDC48YDL126C ATP20Q12233 115 aa3.35□□□□□ -1.87
CDC48YDL126C YMR230W-AQ3E7B5 62 aa3.35□□□□□ -1.87
CDC48YDL126C IRA2P19158 3079 aa3.35□□□□□ -1.87
CDC48YDL126C YIR020CP40575 100 aa3.35□□□□□ -1.87
CDC48YDL126C RPL43AP0CX25 92 aaKnown RBP3.34□□□□□ -1.88
CDC48YDL126C RPL43BP0CX26 92 aa3.34□□□□□ -1.88
CDC48YDL126C YEL045CP32616 141 aa3.33□□□□□ -1.88
CDC48YDL126C RRT1P38192 103 aa3.33□□□□□ -1.88
CDC48YDL126C ICS3P47034 131 aa3.33□□□□□ -1.88
CDC48YDL126C YAR023CD6VPM8 179 aa3.33□□□□□ -1.88
CDC48YDL126C RPL26AP05743 127 aaKnown RBP3.32□□□□□ -1.88
CDC48YDL126C TDA2P40045 126 aa3.32□□□□□ -1.88
CDC48YDL126C Q0297Q9ZZV8 51 aa3.32□□□□□ -1.88
CDC48YDL126C MRPL38P35996 138 aaPredicted RBP3.32□□□□□ -1.88
CDC48YDL126C DSE2P38844 325 aa3.32□□□□□ -1.88
CDC48YDL126C YOR020W-AQ3E824 90 aa3.32□□□□□ -1.88
CDC48YDL126C CUP1-1P0CX80 61 aa3.31□□□□□ -1.88
CDC48YDL126C CUP1-2P0CX81 61 aa3.31□□□□□ -1.88
CDC48YDL126C YBR209WP38311 105 aa3.31□□□□□ -1.88
CDC48YDL126C YML122CQ03207 126 aa3.31□□□□□ -1.88
CDC48YDL126C QCR8P08525 94 aa3.31□□□□□ -1.88
CDC48YDL126C YDL022C-AP0C5L6 82 aa3.31□□□□□ -1.88
CDC48YDL126C YGR121W-AQ3E816 71 aa3.31□□□□□ -1.88
CDC48YDL126C YEL067CP39978 195 aa3.3□□□□□ -1.88
CDC48YDL126C IMP2P46972 177 aa3.3□□□□□ -1.88
CDC48YDL126C GCN1P33892 2672 aaKnown RBP3.3□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 27.2 ms