RNA–Protein interactions for RNA: YDL108W

KIN28, Transcript of Serine/threonine protein kinase, subunit of transcription factor TFIIH, yeastyeast

Gene KIN28, Length 921 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
KIN28YDL108W SEC11P15367 167 aa3.18□□□□□ -1.9
KIN28YDL108W YMR030W-AQ3E760 96 aa3.18□□□□□ -1.9
KIN28YDL108W YOL085CQ99345 113 aa3.18□□□□□ -1.9
KIN28YDL108W RIF1P29539 1916 aa3.17□□□□□ -1.9
KIN28YDL108W RPS22AP0C0W1 130 aaKnown RBP3.17□□□□□ -1.9
KIN28YDL108W YHR022CP38763 256 aa3.17□□□□□ -1.9
KIN28YDL108W HPA2Q06592 156 aa3.17□□□□□ -1.9
KIN28YDL108W YCL048W-AQ2V2Q2 79 aa3.17□□□□□ -1.9
KIN28YDL108W CMC4Q3E7A9 73 aa3.17□□□□□ -1.9
KIN28YDL108W NUP188P52593 1655 aaKnown RBP3.17□□□□□ -1.9
KIN28YDL108W YER188C-AP0C0V2 99 aa3.16□□□□□ -1.9
KIN28YDL108W MRPL38P35996 138 aaPredicted RBP3.16□□□□□ -1.9
KIN28YDL108W PDX3P38075 228 aaKnown RBP3.16□□□□□ -1.9
KIN28YDL108W SPI1P40092 148 aa3.16□□□□□ -1.9
KIN28YDL108W YMR321CQ04898 105 aa3.16□□□□□ -1.9
KIN28YDL108W RPS19AP07280 144 aaKnown RBP3.15□□□□□ -1.91
KIN28YDL108W RPS19BP07281 144 aaPredicted RBP3.15□□□□□ -1.91
KIN28YDL108W YLR162WQ06235 118 aa3.15□□□□□ -1.91
KIN28YDL108W YGR121W-AQ3E816 71 aa3.15□□□□□ -1.91
KIN28YDL108W TIM12P32830 109 aa3.14□□□□□ -1.91
KIN28YDL108W MIX17Q03667 156 aa3.14□□□□□ -1.91
KIN28YDL108W IRC21Q04772 201 aa3.14□□□□□ -1.91
KIN28YDL108W FIT2Q08906 153 aa3.14□□□□□ -1.91
KIN28YDL108W COX19Q3E731 98 aa3.14□□□□□ -1.91
KIN28YDL108W RPS22BQ3E7Y3 130 aaKnown RBP3.14□□□□□ -1.91
KIN28YDL108W STT4P37297 1900 aa3.14□□□□□ -1.91
KIN28YDL108W CYR1P08678 2026 aaKnown RBP3.14□□□□□ -1.91
KIN28YDL108W PFY1P07274 126 aa3.13□□□□□ -1.91
KIN28YDL108W DAD4P69851 72 aa3.13□□□□□ -1.91
KIN28YDL108W SED1Q01589 338 aa3.13□□□□□ -1.91
KIN28YDL108W KOG1P38873 1557 aa3.12□□□□□ -1.91
KIN28YDL108W FPR1P20081 114 aaKnown RBP3.12□□□□□ -1.91
KIN28YDL108W YHR173CP38864 112 aa3.12□□□□□ -1.91
KIN28YDL108W YDR246W-AQ3E763 66 aa3.12□□□□□ -1.91
KIN28YDL108W YCR095W-AQ3E787 52 aa3.12□□□□□ -1.91
KIN28YDL108W IML1P47170 1584 aa3.12□□□□□ -1.91
KIN28YDL108W QCR9P22289 66 aa3.11□□□□□ -1.91
KIN28YDL108W MRX7P53869 86 aa3.11□□□□□ -1.91
KIN28YDL108W VPS68Q12016 184 aa3.11□□□□□ -1.91
KIN28YDL108W YSY6P38374 65 aa3.1□□□□□ -1.91
KIN28YDL108W AIM19P40502 157 aa3.1□□□□□ -1.91
KIN28YDL108W YMR122CQ03879 124 aa3.1□□□□□ -1.91
KIN28YDL108W CCW14O13547 238 aa3.09□□□□□ -1.91
KIN28YDL108W HMRA2P0CY13 119 aa3.09□□□□□ -1.91
KIN28YDL108W FPR2P32472 135 aa3.09□□□□□ -1.91
KIN28YDL108W MPC2P38857 129 aa3.09□□□□□ -1.91
KIN28YDL108W VPS55P47111 140 aa3.09□□□□□ -1.91
KIN28YDL108W YGR035W-AQ45U48 73 aa3.09□□□□□ -1.91
KIN28YDL108W SPC1P46965 94 aa3.08□□□□□ -1.92
KIN28YDL108W SNA2P56508 79 aa3.08□□□□□ -1.92
KIN28YDL108W YDR114CQ04597 100 aa3.08□□□□□ -1.92
KIN28YDL108W CDC39P25655 2108 aaKnown RBP3.07□□□□□ -1.92
KIN28YDL108W HIR3P47171 1648 aa3.07□□□□□ -1.92
KIN28YDL108W PAU6P0CE90 120 aa3.06□□□□□ -1.92
KIN28YDL108W PAU18P0CE91 120 aa3.06□□□□□ -1.92
KIN28YDL108W PAU8P0CE92 120 aa3.06□□□□□ -1.92
KIN28YDL108W PAU11P0CE93 120 aa3.06□□□□□ -1.92
KIN28YDL108W PAU13P38725 120 aa3.06□□□□□ -1.92
KIN28YDL108W SLH1P53327 1967 aaKnown RBP3.06□□□□□ -1.92
KIN28YDL108W PAU4P53427 120 aa3.06□□□□□ -1.92
KIN28YDL108W ERI1P62651 68 aaKnown RBP3.06□□□□□ -1.92
KIN28YDL108W PAU10Q03050 120 aa3.06□□□□□ -1.92
KIN28YDL108W PRM7Q12459 698 aa3.06□□□□□ -1.92
KIN28YDL108W PAU9Q3E770 120 aa3.06□□□□□ -1.92
KIN28YDL108W YLR285C-AQ3E771 56 aa3.06□□□□□ -1.92
KIN28YDL108W COA3Q3E7B2 85 aa3.06□□□□□ -1.92
KIN28YDL108W AIM4P38305 123 aaPredicted RBP3.05□□□□□ -1.92
KIN28YDL108W YHR007C-AQ07074 71 aa3.05□□□□□ -1.92
KIN28YDL108W YJL144WP47009 104 aa3.04□□□□□ -1.92
KIN28YDL108W RPL26BP53221 127 aaKnown RBP3.04□□□□□ -1.92
KIN28YDL108W YRF1-1P0CX20 1796 aa3.04□□□□□ -1.92
KIN28YDL108W YRF1-5P0CX21 1796 aa3.04□□□□□ -1.92
KIN28YDL108W YRF1-8P0CX22 1796 aa3.04□□□□□ -1.92
KIN28YDL108W YGL014C-AP0C5N1 53 aa3.03□□□□□ -1.92
KIN28YDL108W YBL071CP38185 102 aa3.03□□□□□ -1.92
KIN28YDL108W BSC4P53841 131 aa3.03□□□□□ -1.92
KIN28YDL108W YBR032WP38223 100 aa3.02□□□□□ -1.93
KIN28YDL108W RDS3Q06835 107 aaPredicted RBP3.02□□□□□ -1.93
KIN28YDL108W ARO1P08566 1588 aaKnown RBP3.02□□□□□ -1.93
KIN28YDL108W YDR210WQ03482 75 aa3.01□□□□□ -1.93
KIN28YDL108W YDL012CQ12489 107 aa3.01□□□□□ -1.93
KIN28YDL108W YDR182W-AQ3E796 67 aa3.01□□□□□ -1.93
KIN28YDL108W SNF2P22082 1703 aa3□□□□□ -1.93
KIN28YDL108W YIL163CP40448 117 aa3□□□□□ -1.93
KIN28YDL108W VAM10Q08474 114 aa3□□□□□ -1.93
KIN28YDL108W ATG2P53855 1592 aa3□□□□□ -1.93
KIN28YDL108W RPL33AP05744 107 aaKnown RBP2.99□□□□□ -1.93
KIN28YDL108W YER084WP40057 128 aa2.99□□□□□ -1.93
KIN28YDL108W YDR010CQ12426 110 aa2.99□□□□□ -1.93
KIN28YDL108W YIL156W-BQ2V2P4 73 aa2.99□□□□□ -1.93
KIN28YDL108W NOP10Q6Q547 58 aaPredicted RBP2.99□□□□□ -1.93
KIN28YDL108W PDR15Q04182 1529 aaKnown RBP2.98□□□□□ -1.93
KIN28YDL108W DNF2Q12675 1612 aa2.98□□□□□ -1.93
KIN28YDL108W RPS11AP0CX47 156 aaKnown RBP2.98□□□□□ -1.93
KIN28YDL108W RPS11BP0CX48 156 aaKnown RBP2.98□□□□□ -1.93
KIN28YDL108W PAU7P39545 55 aa2.98□□□□□ -1.93
KIN28YDL108W BPH1P25356 2167 aa2.98□□□□□ -1.93
KIN28YDL108W GCN2P15442 1659 aa2.96□□□□□ -1.94
KIN28YDL108W YSF3P0C074 85 aaPredicted RBP2.96□□□□□ -1.94
KIN28YDL108W PAU1P0CE88 120 aa2.96□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 129 ms