RNA–Protein interactions for RNA: YBR175W

SWD3, Transcript of Essential subunit of the COMPASS (Set1C) complex, yeastyeast

Gene SWD3, Length 948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWD3YBR175W YMR122CQ03879 124 aa1.69□□□□□ -2.14
SWD3YBR175W SEN15Q04675 128 aa1.69□□□□□ -2.14
SWD3YBR175W UBR2Q07963 1872 aa1.69□□□□□ -2.14
SWD3YBR175W AIM4P38305 123 aaPredicted RBP1.68□□□□□ -2.14
SWD3YBR175W YFL065CP43539 102 aa1.68□□□□□ -2.14
SWD3YBR175W SCP1Q08873 200 aa1.68□□□□□ -2.14
SWD3YBR175W PRM3Q08931 133 aa1.68□□□□□ -2.14
SWD3YBR175W YGL194C-AQ2V2P6 80 aa1.68□□□□□ -2.14
SWD3YBR175W RSM19P53733 91 aaPredicted RBP1.67□□□□□ -2.14
SWD3YBR175W FIT3Q08907 204 aa1.67□□□□□ -2.14
SWD3YBR175W MYO1P08964 1928 aa1.66□□□□□ -2.14
SWD3YBR175W SNU13P39990 126 aaKnown RBP1.66□□□□□ -2.14
SWD3YBR175W POR2P40478 281 aa1.66□□□□□ -2.14
SWD3YBR175W EMC5P40540 141 aa1.66□□□□□ -2.14
SWD3YBR175W NHP10Q03435 203 aa1.66□□□□□ -2.14
SWD3YBR175W COA4Q05809 96 aa1.66□□□□□ -2.14
SWD3YBR175W YDR029WQ12111 104 aa1.66□□□□□ -2.14
SWD3YBR175W PAU16P35994 123 aa1.65□□□□□ -2.15
SWD3YBR175W MSL1P40567 111 aaPredicted RBP1.65□□□□□ -2.15
SWD3YBR175W PAU15P40585 124 aa1.65□□□□□ -2.15
SWD3YBR175W PMD1P32634 1753 aa1.64□□□□□ -2.15
SWD3YBR175W RPL22AP05749 121 aaKnown RBP1.64□□□□□ -2.15
SWD3YBR175W YPR203WQ08994 102 aa1.64□□□□□ -2.15
SWD3YBR175W RRT15Q3E811 62 aa1.64□□□□□ -2.15
SWD3YBR175W YKL068W-AQ3E826 78 aa1.64□□□□□ -2.15
SWD3YBR175W YSF3P0C074 85 aaPredicted RBP1.63□□□□□ -2.15
SWD3YBR175W HMRA2P0CY13 119 aa1.63□□□□□ -2.15
SWD3YBR175W YHR138CP38841 114 aaPredicted RBP1.63□□□□□ -2.15
SWD3YBR175W CYB5P40312 120 aa1.63□□□□□ -2.15
SWD3YBR175W YIL163CP40448 117 aa1.63□□□□□ -2.15
SWD3YBR175W YMR082CQ04276 118 aa1.63□□□□□ -2.15
SWD3YBR175W YLR363W-AQ3E747 85 aa1.63□□□□□ -2.15
SWD3YBR175W YLR285C-AQ3E771 56 aa1.63□□□□□ -2.15
SWD3YBR175W HFA1P32874 2273 aa1.63□□□□□ -2.15
SWD3YBR175W YHR212W-AP0CX91 67 aa1.62□□□□□ -2.15
SWD3YBR175W HMRA1P0CY11 126 aa1.62□□□□□ -2.15
SWD3YBR175W YHL037CP38733 133 aa1.62□□□□□ -2.15
SWD3YBR175W IRC21Q04772 201 aa1.62□□□□□ -2.15
SWD3YBR175W BEM2P39960 2167 aaKnown RBP1.62□□□□□ -2.15
SWD3YBR175W SRB6P32570 121 aa1.61□□□□□ -2.15
SWD3YBR175W YHL005CP38752 130 aa1.61□□□□□ -2.15
SWD3YBR175W YMR321CQ04898 105 aa1.61□□□□□ -2.15
SWD3YBR175W SLH1P53327 1967 aaKnown RBP1.6□□□□□ -2.15
SWD3YBR175W ECM12O13529 151 aa1.6□□□□□ -2.15
SWD3YBR175W AQY2P0CD90 149 aa1.6□□□□□ -2.15
SWD3YBR175W SUS1Q6WNK7 96 aa1.6□□□□□ -2.15
SWD3YBR175W PAU5P43575 122 aa1.59□□□□□ -2.15
SWD3YBR175W LSM6Q06406 86 aaKnown RBP1.59□□□□□ -2.15
SWD3YBR175W CCW12Q12127 133 aa1.59□□□□□ -2.15
SWD3YBR175W YCL048W-AQ2V2Q2 79 aa1.59□□□□□ -2.15
SWD3YBR175W GCV3P39726 170 aaPredicted RBP1.58□□□□□ -2.16
SWD3YBR175W YJL009WP47078 108 aa1.58□□□□□ -2.16
SWD3YBR175W VPS55P47111 140 aa1.58□□□□□ -2.16
SWD3YBR175W YNL122CP53921 115 aaPredicted RBP1.58□□□□□ -2.16
SWD3YBR175W YDR042CQ03205 200 aa1.58□□□□□ -2.16
SWD3YBR175W ENV10Q99382 181 aa1.58□□□□□ -2.16
SWD3YBR175W RPS22AP0C0W1 130 aaKnown RBP1.57□□□□□ -2.16
SWD3YBR175W ROX3P25046 220 aa1.57□□□□□ -2.16
SWD3YBR175W YBR013CP38215 129 aa1.57□□□□□ -2.16
SWD3YBR175W YGL041C-BQ3E750 60 aa1.57□□□□□ -2.16
SWD3YBR175W LAA1P39526 2014 aa1.56□□□□□ -2.16
SWD3YBR175W RSM18P40033 138 aa1.56□□□□□ -2.16
SWD3YBR175W ICS3P47034 131 aa1.56□□□□□ -2.16
SWD3YBR175W MIC27P50945 234 aa1.56□□□□□ -2.16
SWD3YBR175W YOL118CQ08259 102 aa1.56□□□□□ -2.16
SWD3YBR175W YCR095W-AQ3E787 52 aa1.56□□□□□ -2.16
SWD3YBR175W POL2P21951 2222 aaKnown RBP1.55□□□□□ -2.16
SWD3YBR175W YAR064WP39563 99 aa1.55□□□□□ -2.16
SWD3YBR175W IMP2P46972 177 aa1.55□□□□□ -2.16
SWD3YBR175W MRPS12P53732 153 aa1.55□□□□□ -2.16
SWD3YBR175W YOR072WQ08486 104 aa1.55□□□□□ -2.16
SWD3YBR175W YGR240C-AQ3E786 66 aa1.55□□□□□ -2.16
SWD3YBR175W CCW14O13547 238 aa1.54□□□□□ -2.16
SWD3YBR175W ICY1Q04329 127 aa1.54□□□□□ -2.16
SWD3YBR175W LCL2Q08045 131 aa1.54□□□□□ -2.16
SWD3YBR175W HKR1P41809 1802 aa1.53□□□□□ -2.16
SWD3YBR175W YIL046W-AQ3E7Z4 54 aa1.53□□□□□ -2.16
SWD3YBR175W YOL013W-AP0C272 63 aaPredicted RBP1.52□□□□□ -2.17
SWD3YBR175W YCR001WP25347 104 aa1.52□□□□□ -2.17
SWD3YBR175W CWP2P43497 92 aa1.52□□□□□ -2.17
SWD3YBR175W SNA2P56508 79 aa1.52□□□□□ -2.17
SWD3YBR175W YMR175W-AQ3E766 64 aa1.52□□□□□ -2.17
SWD3YBR175W MHF2Q3E829 80 aa1.52□□□□□ -2.17
SWD3YBR175W MRPL31P14063 131 aaPredicted RBP1.51□□□□□ -2.17
SWD3YBR175W MGR2Q02889 113 aa1.51□□□□□ -2.17
SWD3YBR175W YDR210WQ03482 75 aa1.51□□□□□ -2.17
SWD3YBR175W RPS22BQ3E7Y3 130 aaKnown RBP1.51□□□□□ -2.17
SWD3YBR175W UTP10P42945 1769 aaKnown RBP1.5□□□□□ -2.17
SWD3YBR175W PAU6P0CE90 120 aa1.5□□□□□ -2.17
SWD3YBR175W PAU18P0CE91 120 aa1.5□□□□□ -2.17
SWD3YBR175W MRPL38P35996 138 aaPredicted RBP1.5□□□□□ -2.17
SWD3YBR175W YBL071CP38185 102 aa1.5□□□□□ -2.17
SWD3YBR175W YCR085WP25650 117 aa1.49□□□□□ -2.17
SWD3YBR175W MRP17P28778 131 aa1.49□□□□□ -2.17
SWD3YBR175W YIL102CP40488 101 aa1.49□□□□□ -2.17
SWD3YBR175W SPC1P46965 94 aa1.49□□□□□ -2.17
SWD3YBR175W POC4Q12245 148 aaPredicted RBP1.49□□□□□ -2.17
SWD3YBR175W YPL038W-AQ3E7B4 63 aa1.49□□□□□ -2.17
SWD3YBR175W MLP1Q02455 1875 aaKnown RBP1.49□□□□□ -2.17
SWD3YBR175W RPA12P32529 125 aaKnown RBP1.48□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 25.9 ms