RNA–Protein interactions for RNA: YBL004W

UTP20, Transcript of Component of the small-subunit (SSU) processome, yeastyeast

Gene UTP20, Length 7,482 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UTP20YBL004W PAA1Q12447 191 aaKnown RBP0.14□□□□□ -2.39
UTP20YBL004W RPP1AP05318 106 aaPredicted RBP0.13□□□□□ -2.39
UTP20YBL004W YFR057WP43625 151 aa0.13□□□□□ -2.39
UTP20YBL004W BCP1Q06338 283 aa0.13□□□□□ -2.39
UTP20YBL004W YOL118CQ08259 102 aa0.13□□□□□ -2.39
UTP20YBL004W SCP1Q08873 200 aa0.13□□□□□ -2.39
UTP20YBL004W RPL26AP05743 127 aaKnown RBP0.13□□□□□ -2.39
UTP20YBL004W PAM17P36147 197 aa0.13□□□□□ -2.39
UTP20YBL004W YGR026WP53217 278 aa0.13□□□□□ -2.39
UTP20YBL004W RPL26BP53221 127 aaKnown RBP0.13□□□□□ -2.39
UTP20YBL004W NMA1Q06178 401 aaKnown RBP0.13□□□□□ -2.39
UTP20YBL004W YPL257WQ08974 193 aa0.13□□□□□ -2.39
UTP20YBL004W MRPL11P36521 249 aaPredicted RBP0.13□□□□□ -2.39
UTP20YBL004W SHG1P38337 142 aa0.13□□□□□ -2.39
UTP20YBL004W SER2P42941 309 aa0.13□□□□□ -2.39
UTP20YBL004W SBH1P52870 82 aa0.13□□□□□ -2.39
UTP20YBL004W YNR066CP53752 436 aa0.13□□□□□ -2.39
UTP20YBL004W YHR173CP38864 112 aa0.13□□□□□ -2.39
UTP20YBL004W YCL021W-AQ96VH3 125 aa0.13□□□□□ -2.39
UTP20YBL004W TOA2P32774 122 aa0.13□□□□□ -2.39
UTP20YBL004W YIL102C-AQ2V2P5 75 aa0.13□□□□□ -2.39
UTP20YBL004W AQY2P0CD90 149 aa0.13□□□□□ -2.39
UTP20YBL004W PRE1P22141 198 aaKnown RBP0.13□□□□□ -2.39
UTP20YBL004W VMA7P39111 118 aa0.13□□□□□ -2.39
UTP20YBL004W VMA21P41806 77 aa0.13□□□□□ -2.39
UTP20YBL004W LSM8P47093 109 aaKnown RBP0.13□□□□□ -2.39
UTP20YBL004W RRT15Q3E811 62 aa0.13□□□□□ -2.39
UTP20YBL004W YFL041W-AQ3E817 63 aa0.13□□□□□ -2.39
UTP20YBL004W YOR020W-AQ3E824 90 aa0.13□□□□□ -2.39
UTP20YBL004W GCV3P39726 170 aaPredicted RBP0.12□□□□□ -2.39
UTP20YBL004W JAC1P53193 184 aa0.12□□□□□ -2.39
UTP20YBL004W GPI19Q04082 140 aa0.12□□□□□ -2.39
UTP20YBL004W TIR2P33890 251 aa0.12□□□□□ -2.39
UTP20YBL004W RPL27BP0C2H7 136 aaKnown RBP0.12□□□□□ -2.39
UTP20YBL004W ATG8P38182 117 aaRIP-Chip data0.12□□□□□ -2.39not detected
UTP20YBL004W YBR292CP38357 123 aa0.12□□□□□ -2.39
UTP20YBL004W SNN1P48232 102 aa0.12□□□□□ -2.39
UTP20YBL004W YPL038W-AQ3E7B4 63 aa0.12□□□□□ -2.39
UTP20YBL004W ADD37Q03233 198 aa0.12□□□□□ -2.39
UTP20YBL004W DCN1Q12395 269 aa0.12□□□□□ -2.39
UTP20YBL004W TPI1P00942 248 aaKnown RBP0.12□□□□□ -2.39
UTP20YBL004W YLR157W-DP0CE99 70 aa0.12□□□□□ -2.39
UTP20YBL004W QCR9P22289 66 aa0.12□□□□□ -2.39
UTP20YBL004W GDT1P38301 280 aaPredicted RBP0.12□□□□□ -2.39
UTP20YBL004W MPC3P53311 146 aa0.12□□□□□ -2.39
UTP20YBL004W YMR090WQ04304 227 aaKnown RBP0.12□□□□□ -2.39
UTP20YBL004W ICY1Q04329 127 aa0.12□□□□□ -2.39
UTP20YBL004W SLO1Q3E784 85 aa0.12□□□□□ -2.39
UTP20YBL004W UBI4P0CG63 381 aaKnown RBP0.12□□□□□ -2.39
UTP20YBL004W DSE2P38844 325 aa0.12□□□□□ -2.39
UTP20YBL004W YPR153WQ06537 140 aa0.12□□□□□ -2.39
UTP20YBL004W APS1P35181 156 aa0.11□□□□□ -2.39
UTP20YBL004W COX23P38824 151 aa0.11□□□□□ -2.39
UTP20YBL004W PEX17P40155 199 aa0.11□□□□□ -2.39
UTP20YBL004W GIM5Q04493 163 aa0.11□□□□□ -2.39
UTP20YBL004W YKR070WP36151 352 aaKnown RBP0.11□□□□□ -2.39
UTP20YBL004W PAU24P38155 120 aa0.11□□□□□ -2.39
UTP20YBL004W MSL1P40567 111 aaPredicted RBP0.11□□□□□ -2.39
UTP20YBL004W YPR014CQ6B0W2 109 aa0.11□□□□□ -2.39
UTP20YBL004W RPS25BP0C0T4 108 aaKnown RBP0.11□□□□□ -2.39
UTP20YBL004W COX14P39103 70 aa0.11□□□□□ -2.39
UTP20YBL004W NAT5Q08689 176 aa0.11□□□□□ -2.39
UTP20YBL004W RPS25AQ3E792 108 aaPredicted RBP0.11□□□□□ -2.39
UTP20YBL004W YAL064WP39711 94 aa0.11□□□□□ -2.39
UTP20YBL004W GLC8P41818 229 aa0.11□□□□□ -2.39
UTP20YBL004W THG1P53215 237 aaKnown RBP0.11□□□□□ -2.39
UTP20YBL004W YMR295CQ03559 197 aa0.11□□□□□ -2.39
UTP20YBL004W YOR314WQ12506 109 aa0.11□□□□□ -2.39
UTP20YBL004W YNL162W-AQ3E7A8 72 aa0.11□□□□□ -2.39
UTP20YBL004W RPL36BO14455 100 aaKnown RBP0.11□□□□□ -2.39
UTP20YBL004W RPL36AP05745 100 aaPredicted RBP0.11□□□□□ -2.39
UTP20YBL004W RPL27AP0C2H6 136 aaKnown RBP0.11□□□□□ -2.39
UTP20YBL004W SRB6P32570 121 aa0.11□□□□□ -2.39
UTP20YBL004W SKI6P46948 246 aaPredicted RBP0.11□□□□□ -2.39
UTP20YBL004W LSM6Q06406 86 aaKnown RBP0.1□□□□□ -2.39
UTP20YBL004W HUG1Q6Q5K6 68 aa0.1□□□□□ -2.39
UTP20YBL004W YFR009W-AP0C5M9 85 aa0.1□□□□□ -2.39
UTP20YBL004W HSP12P22943 109 aaKnown RBP0.1□□□□□ -2.39
UTP20YBL004W CWP2P43497 92 aa0.1□□□□□ -2.39
UTP20YBL004W AIM11P87275 137 aa0.1□□□□□ -2.39
UTP20YBL004W YMR181CQ03231 154 aa0.1□□□□□ -2.39
UTP20YBL004W YHR086W-AQ3E746 53 aa0.1□□□□□ -2.39
UTP20YBL004W PDR17P53844 350 aa0.1□□□□□ -2.39
UTP20YBL004W YIL014C-AQ02598 104 aa0.1□□□□□ -2.39
UTP20YBL004W YKL065W-AQ2V2P2 73 aa0.1□□□□□ -2.39
UTP20YBL004W YER078W-AQ3E7A2 54 aa0.1□□□□□ -2.39
UTP20YBL004W YAL067W-AQ8TGK6 75 aa0.1□□□□□ -2.39
UTP20YBL004W IGO2Q9P305 131 aa0.1□□□□□ -2.39
UTP20YBL004W LIP1Q03579 150 aa0.1□□□□□ -2.39
UTP20YBL004W YMR316C-AI2HB70 103 aa0.1□□□□□ -2.39
UTP20YBL004W PAU1P0CE88 120 aa0.1□□□□□ -2.39
UTP20YBL004W PAU14P0CE89 120 aa0.1□□□□□ -2.39
UTP20YBL004W PAU6P0CE90 120 aa0.1□□□□□ -2.39
UTP20YBL004W PAU18P0CE91 120 aa0.1□□□□□ -2.39
UTP20YBL004W PAU8P0CE92 120 aa0.1□□□□□ -2.39
UTP20YBL004W PAU11P0CE93 120 aa0.1□□□□□ -2.39
UTP20YBL004W YCR085WP25650 117 aa0.1□□□□□ -2.39
UTP20YBL004W SHE2P36068 246 aaKnown RBP RIP-Chip data0.1□□□□□ -2.39not detected
UTP20YBL004W YBR219CP38317 127 aa0.1□□□□□ -2.39
UTP20YBL004W PAU13P38725 120 aa0.1□□□□□ -2.39
Retrieved 100 of 5,963 RNA–protein pairs in 34.4 ms