RNA–Protein interactions for RNA: YAR007C

RFA1, Transcript of Subunit of heterotrimeric Replication Protein A (RPA), yeastyeast

Gene RFA1, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RFA1YAR007C YOR011W-AQ3E807 68 aa4.15□□□□□ -1.75
RFA1YAR007C ARC15P40518 154 aaRIP-Chip data4.14□□□□□ -1.75not detected
RFA1YAR007C SBH1P52870 82 aa4.14□□□□□ -1.75
RFA1YAR007C RGM1Q00453 211 aa4.14□□□□□ -1.75
RFA1YAR007C YPR013CQ12145 317 aa4.14□□□□□ -1.75
RFA1YAR007C TRA1P38811 3744 aa4.14□□□□□ -1.75
RFA1YAR007C YBR121C-AP0C5L4 52 aa4.12□□□□□ -1.75
RFA1YAR007C YER135CP40082 130 aa4.12□□□□□ -1.75
RFA1YAR007C YER187WP40102 141 aa4.12□□□□□ -1.75
RFA1YAR007C YLR285C-AQ3E771 56 aa4.12□□□□□ -1.75
RFA1YAR007C YNL146C-AQ3E7Z1 64 aa4.11□□□□□ -1.75
RFA1YAR007C YRA2P36036 203 aaKnown RBP RIP-Chip data4.1□□□□□ -1.75not detected
RFA1YAR007C EDC1P53080 175 aaPredicted RBP4.1□□□□□ -1.75
RFA1YAR007C IRC21Q04772 201 aa4.1□□□□□ -1.75
RFA1YAR007C RPS28BP0C0X0 67 aaKnown RBP4.09□□□□□ -1.75
RFA1YAR007C YLR156WP0CE96 114 aa4.09□□□□□ -1.75
RFA1YAR007C YLR159WP0CE97 114 aa4.09□□□□□ -1.75
RFA1YAR007C YLR161WP0CE98 114 aa4.09□□□□□ -1.75
RFA1YAR007C YJR107C-AP0CT86 78 aa4.09□□□□□ -1.75
RFA1YAR007C ERG28P40030 148 aa4.09□□□□□ -1.75
RFA1YAR007C YFR035CP43608 114 aa4.09□□□□□ -1.75
RFA1YAR007C YMR295CQ03559 197 aa4.09□□□□□ -1.75
RFA1YAR007C YLR281CQ05863 155 aa4.09□□□□□ -1.75
RFA1YAR007C YDR246W-AQ3E763 66 aa4.09□□□□□ -1.75
RFA1YAR007C RPS28AQ3E7X9 67 aaPredicted RBP4.09□□□□□ -1.75
RFA1YAR007C YLR236CA0A023PZG4 107 aa4.09□□□□□ -1.76
RFA1YAR007C RPL11AP0C0W9 174 aaKnown RBP4.09□□□□□ -1.76
RFA1YAR007C ALG13P53178 202 aa4.09□□□□□ -1.76
RFA1YAR007C YMR175W-AQ3E766 64 aa4.09□□□□□ -1.76
RFA1YAR007C FMP27Q06179 2628 aa4.09□□□□□ -1.76
RFA1YAR007C MIG3P39943 394 aa4.08□□□□□ -1.76
RFA1YAR007C RPL11BQ3E757 174 aaPredicted RBP4.07□□□□□ -1.76
RFA1YAR007C YOR020W-AQ3E824 90 aa4.07□□□□□ -1.76
RFA1YAR007C BET1P22804 142 aa4.07□□□□□ -1.76
RFA1YAR007C YBR219CP38317 127 aa4.07□□□□□ -1.76
RFA1YAR007C COX14P39103 70 aa4.07□□□□□ -1.76
RFA1YAR007C RPR2P40571 144 aa4.07□□□□□ -1.76
RFA1YAR007C HAL1Q01766 294 aa4.07□□□□□ -1.76
RFA1YAR007C YMR244WQ04018 355 aa4.07□□□□□ -1.76
RFA1YAR007C YLL006W-AQ3E814 58 aa4.07□□□□□ -1.76
RFA1YAR007C TOS8P53147 276 aa4.06□□□□□ -1.76
RFA1YAR007C MPC3P53311 146 aa4.06□□□□□ -1.76
RFA1YAR007C TIM10P87108 93 aa4.06□□□□□ -1.76
RFA1YAR007C AIM4P38305 123 aaPredicted RBP4.05□□□□□ -1.76
RFA1YAR007C ATP20Q12233 115 aa4.05□□□□□ -1.76
RFA1YAR007C KTI11Q3E840 82 aa4.05□□□□□ -1.76
RFA1YAR007C KSH1Q8TGJ3 72 aa4.05□□□□□ -1.76
RFA1YAR007C PMP3P87284 55 aa4.05□□□□□ -1.76
RFA1YAR007C VAM10Q08474 114 aa4.05□□□□□ -1.76
RFA1YAR007C COX17Q12287 69 aa4.05□□□□□ -1.76
RFA1YAR007C ATP18P81450 59 aa4.04□□□□□ -1.76
RFA1YAR007C MRPS8Q03799 155 aa4.04□□□□□ -1.76
RFA1YAR007C UBC4P15731 148 aa4.03□□□□□ -1.76
RFA1YAR007C SPS100P13130 326 aa4.03□□□□□ -1.77
RFA1YAR007C GAT4P40569 121 aa4.03□□□□□ -1.77
RFA1YAR007C RPL38P49167 78 aaKnown RBP4.03□□□□□ -1.77
RFA1YAR007C ERI1P62651 68 aaKnown RBP4.02□□□□□ -1.77
RFA1YAR007C SRL1Q08673 210 aa4.02□□□□□ -1.77
RFA1YAR007C YAR029WP39549 74 aa4.01□□□□□ -1.77
RFA1YAR007C TDA8Q6B2U8 126 aa4.01□□□□□ -1.77
RFA1YAR007C YFR009W-AP0C5M9 85 aa4.01□□□□□ -1.77
RFA1YAR007C YIR020CP40575 100 aa4.01□□□□□ -1.77
RFA1YAR007C YFL019CP43576 117 aa4.01□□□□□ -1.77
RFA1YAR007C TMC1Q08422 150 aaPredicted RBP4.01□□□□□ -1.77
RFA1YAR007C YLR412C-AQ3E742 68 aa4.01□□□□□ -1.77
RFA1YAR007C YGL260WP53056 76 aa4□□□□□ -1.77
RFA1YAR007C SPG4Q04438 115 aa4□□□□□ -1.77
RFA1YAR007C YMR320WQ04897 101 aa4□□□□□ -1.77
RFA1YAR007C HOR7Q05827 59 aa4□□□□□ -1.77
RFA1YAR007C TAR1Q8TGM6 124 aa4□□□□□ -1.77
RFA1YAR007C RPS11AP0CX47 156 aaKnown RBP3.99□□□□□ -1.77
RFA1YAR007C RPS11BP0CX48 156 aaKnown RBP3.99□□□□□ -1.77
RFA1YAR007C RSM18P40033 138 aa3.99□□□□□ -1.77
RFA1YAR007C YGR164WP53291 111 aa3.99□□□□□ -1.77
RFA1YAR007C ICY1Q04329 127 aa3.99□□□□□ -1.77
RFA1YAR007C RSM19P53733 91 aaPredicted RBP3.98□□□□□ -1.77
RFA1YAR007C YKL183C-AQ3E765 70 aa3.98□□□□□ -1.77
RFA1YAR007C NOP10Q6Q547 58 aaPredicted RBP3.98□□□□□ -1.77
RFA1YAR007C TDA2P40045 126 aa3.98□□□□□ -1.77
RFA1YAR007C URA2P07259 2214 aaKnown RBP3.97□□□□□ -1.77
RFA1YAR007C YAL065CO13511 128 aa3.97□□□□□ -1.77
RFA1YAR007C YPS5P53057 165 aa3.97□□□□□ -1.77
RFA1YAR007C YOR314WQ12506 109 aa3.96□□□□□ -1.77
RFA1YAR007C YOR268CQ08734 132 aa3.96□□□□□ -1.78
RFA1YAR007C TSC3Q3E790 80 aa3.96□□□□□ -1.78
RFA1YAR007C RRT15Q3E811 62 aa3.96□□□□□ -1.78
RFA1YAR007C SFT1P43682 97 aa3.95□□□□□ -1.78
RFA1YAR007C CRC1Q12289 327 aa3.94□□□□□ -1.78
RFA1YAR007C YMR122W-AQ3E842 84 aa3.94□□□□□ -1.78
RFA1YAR007C YPR117WQ06116 2489 aa3.94□□□□□ -1.78
RFA1YAR007C RPL26AP05743 127 aaKnown RBP3.94□□□□□ -1.78
RFA1YAR007C RPL29P05747 59 aaPredicted RBP3.94□□□□□ -1.78
RFA1YAR007C RPL26BP53221 127 aaKnown RBP3.94□□□□□ -1.78
RFA1YAR007C YOL166W-AQ8TGJ1 51 aa3.93□□□□□ -1.78
RFA1YAR007C RPL36BO14455 100 aaKnown RBP3.92□□□□□ -1.78
RFA1YAR007C RPL36AP05745 100 aaPredicted RBP3.92□□□□□ -1.78
RFA1YAR007C MVB12P42939 101 aa3.92□□□□□ -1.78
RFA1YAR007C ICS3P47034 131 aa3.92□□□□□ -1.78
RFA1YAR007C YOL014WQ08110 124 aa3.92□□□□□ -1.78
RFA1YAR007C YGR121W-AQ3E816 71 aa3.92□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms