RNA–Protein interactions for RNA: ENST00000641711.1

PHGDH-224, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 712 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-224ENST00000641711 METTL23Q86XA0 190 aa10.83□□□□□ -0.68
PHGDH-224ENST00000641711 PHF13Q86YI8 300 aaPredicted RBP10.83□□□□□ -0.68
PHGDH-224ENST00000641711 MCOLN2Q8IZK6 566 aa10.83□□□□□ -0.68
PHGDH-224ENST00000641711 TTC39CQ8N584 583 aa10.83□□□□□ -0.68
PHGDH-224ENST00000641711 CCDC26Q8TAB7 109 aa10.83□□□□□ -0.68
PHGDH-224ENST00000641711 WHAMMQ8TF30 809 aa10.83□□□□□ -0.68
PHGDH-224ENST00000641711 HASPINQ8TF76 798 aa10.83□□□□□ -0.68
PHGDH-224ENST00000641711 CASKIN2Q8WXE0 1202 aa10.83□□□□□ -0.68
PHGDH-224ENST00000641711 MYLIPQ8WY64 445 aa10.83□□□□□ -0.68
PHGDH-224ENST00000641711 ALG3Q92685 438 aa10.83□□□□□ -0.68
PHGDH-224ENST00000641711 HPDLQ96IR7 371 aa10.83□□□□□ -0.68
PHGDH-224ENST00000641711 FAM84AQ96KN4 292 aa10.83□□□□□ -0.68
PHGDH-224ENST00000641711 SENP8Q96LD8 212 aa10.83□□□□□ -0.68
PHGDH-224ENST00000641711 FAM161BQ96MY7 647 aa10.83□□□□□ -0.68
PHGDH-224ENST00000641711 EPB41L5Q9HCM4 733 aa10.83□□□□□ -0.68
PHGDH-224ENST00000641711 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.83□□□□□ -0.68
PHGDH-224ENST00000641711 CACNG4Q9UBN1 327 aa10.83□□□□□ -0.68
PHGDH-224ENST00000641711 CNOT8Q9UFF9 292 aaKnown RBP10.83□□□□□ -0.68
PHGDH-224ENST00000641711 PCDHB4Q9Y5E5 795 aa10.83□□□□□ -0.68
PHGDH-224ENST00000641711 GOLGA6L10A0A0M3HER8 536 aa10.82□□□□□ -0.68
PHGDH-224ENST00000641711 F8W810 466 aa10.82□□□□□ -0.68
PHGDH-224ENST00000641711 PPEF2O14830 753 aa10.82□□□□□ -0.68
PHGDH-224ENST00000641711 FGGP02679 453 aa10.82□□□□□ -0.68
PHGDH-224ENST00000641711 IGFBP4P22692 258 aa10.82□□□□□ -0.68
PHGDH-224ENST00000641711 TKTP29401 623 aaKnown RBP10.82□□□□□ -0.68
PHGDH-224ENST00000641711 SLC1A1P43005 524 aa10.82□□□□□ -0.68
PHGDH-224ENST00000641711 BRCC3P46736 316 aa10.82□□□□□ -0.68
PHGDH-224ENST00000641711 LHX1P48742 406 aa10.82□□□□□ -0.68
PHGDH-224ENST00000641711 ERVFC1P60507 584 aa10.82□□□□□ -0.68
PHGDH-224ENST00000641711 MRPS25P82663 173 aaKnown RBP10.82□□□□□ -0.68
PHGDH-224ENST00000641711 GUCY2DQ02846 1103 aa10.82□□□□□ -0.68
PHGDH-224ENST00000641711 MESDQ14696 234 aa10.82□□□□□ -0.68
PHGDH-224ENST00000641711 HSP90B2PQ58FF3 399 aa10.82□□□□□ -0.68
PHGDH-224ENST00000641711 ZNF667Q5HYK9 610 aa10.82□□□□□ -0.68
PHGDH-224ENST00000641711 RTP2Q5QGT7 225 aa10.82□□□□□ -0.68
PHGDH-224ENST00000641711 VARS2Q5ST30 1063 aaKnown RBP10.82□□□□□ -0.68
PHGDH-224ENST00000641711 SPOPLQ6IQ16 392 aa10.82□□□□□ -0.68
PHGDH-224ENST00000641711 SLC8B1Q6J4K2 584 aa10.82□□□□□ -0.68
PHGDH-224ENST00000641711 SND1Q7KZF4 910 aaKnown RBP eCLIP10.82□□□□□ -0.683e-7■□□□□ 9.2
PHGDH-224ENST00000641711 MON1BQ7L1V2 547 aa10.82□□□□□ -0.68
PHGDH-224ENST00000641711 KLHL7Q8IXQ5 586 aa10.82□□□□□ -0.68
PHGDH-224ENST00000641711 GSPT2Q8IYD1 628 aaKnown RBP10.82□□□□□ -0.68
PHGDH-224ENST00000641711 EFHBQ8N7U6 833 aa10.82□□□□□ -0.68
PHGDH-224ENST00000641711 RBBP8NLQ8NC74 664 aaPredicted RBP10.82□□□□□ -0.68
PHGDH-224ENST00000641711 MICAL1Q8TDZ2 1067 aa10.82□□□□□ -0.68
PHGDH-224ENST00000641711 RIN2Q8WYP3 895 aaPredicted RBP10.82□□□□□ -0.68
PHGDH-224ENST00000641711 AP1M1Q9BXS5 423 aa10.82□□□□□ -0.68
PHGDH-224ENST00000641711 DNAI2Q9GZS0 605 aa10.82□□□□□ -0.68
PHGDH-224ENST00000641711 NIF3L1Q9GZT8 377 aa10.82□□□□□ -0.68
PHGDH-224ENST00000641711 XYLT2Q9H1B5 865 aa10.82□□□□□ -0.68
PHGDH-224ENST00000641711 DZANK1Q9NVP4 752 aa10.82□□□□□ -0.68
PHGDH-224ENST00000641711 PCDHA3Q9Y5H8 950 aa10.82□□□□□ -0.68
PHGDH-224ENST00000641711 PLXNA3P51805 1871 aa10.81□□□□□ -0.68
PHGDH-224ENST00000641711 FAM187AA6NFU0 413 aa10.81□□□□□ -0.68
PHGDH-224ENST00000641711 AGPSO00116 658 aa10.81□□□□□ -0.68
PHGDH-224ENST00000641711 RFXAPO00287 272 aa10.81□□□□□ -0.68
PHGDH-224ENST00000641711 TULP1O00294 542 aaPredicted RBP10.81□□□□□ -0.68
PHGDH-224ENST00000641711 CYB561D2O14569 222 aa10.81□□□□□ -0.68
PHGDH-224ENST00000641711 SPTLC1O15269 473 aa10.81□□□□□ -0.68
PHGDH-224ENST00000641711 TBC1D4O60343 1298 aa10.81□□□□□ -0.68
PHGDH-224ENST00000641711 CXCL14O95715 111 aa10.81□□□□□ -0.68
PHGDH-224ENST00000641711 SYF2O95926 243 aaKnown RBP10.81□□□□□ -0.68
PHGDH-224ENST00000641711 CST3P01034 146 aaPredicted RBP10.81□□□□□ -0.68
PHGDH-224ENST00000641711 PCSK1P29120 753 aa10.81□□□□□ -0.68
PHGDH-224ENST00000641711 GNA15P30679 374 aa10.81□□□□□ -0.68
PHGDH-224ENST00000641711 IRS1P35568 1242 aa10.81□□□□□ -0.68
PHGDH-224ENST00000641711 NSFP46459 744 aaKnown RBP10.81□□□□□ -0.68
PHGDH-224ENST00000641711 CARSP49589 748 aaKnown RBP10.81□□□□□ -0.68
PHGDH-224ENST00000641711 MYL6P60660 151 aa10.81□□□□□ -0.68
PHGDH-224ENST00000641711 YWHAEP62258 255 aaKnown RBP10.81□□□□□ -0.68
PHGDH-224ENST00000641711 NOMO3P69849 1222 aa10.81□□□□□ -0.68
PHGDH-224ENST00000641711 DMTNQ08495 405 aa10.81□□□□□ -0.68
PHGDH-224ENST00000641711 PTP4A2Q12974 167 aa10.81□□□□□ -0.68
PHGDH-224ENST00000641711 CYP1B1Q16678 543 aa10.81□□□□□ -0.68
PHGDH-224ENST00000641711 TCEAL5Q5H9L2 206 aa10.81□□□□□ -0.68
PHGDH-224ENST00000641711 LIN9Q5TKA1 542 aa10.81□□□□□ -0.68
PHGDH-224ENST00000641711 TPGS2Q68CL5 300 aa10.81□□□□□ -0.68
PHGDH-224ENST00000641711 OVOS1Q6IE37 1185 aa10.81□□□□□ -0.68
PHGDH-224ENST00000641711 TMEM270Q6UE05 265 aa10.81□□□□□ -0.68
PHGDH-224ENST00000641711 TMEM184AQ6ZMB5 413 aa10.81□□□□□ -0.68
PHGDH-224ENST00000641711 CEP57Q86XR8 500 aa10.81□□□□□ -0.68
PHGDH-224ENST00000641711 THEM5Q8N1Q8 247 aa10.81□□□□□ -0.68
PHGDH-224ENST00000641711 KRT35Q92764 455 aa10.81□□□□□ -0.68
PHGDH-224ENST00000641711 CASP10Q92851 521 aa10.81□□□□□ -0.68
PHGDH-224ENST00000641711 ELMO3Q96BJ8 720 aa10.81□□□□□ -0.68
PHGDH-224ENST00000641711 RHOBTB2Q9BYZ6 727 aa10.81□□□□□ -0.68
PHGDH-224ENST00000641711 PLEKHA4Q9H4M7 779 aa10.81□□□□□ -0.68
PHGDH-224ENST00000641711 TLE6Q9H808 572 aa10.81□□□□□ -0.68
PHGDH-224ENST00000641711 CYP3A43Q9HB55 503 aa10.81□□□□□ -0.68
PHGDH-224ENST00000641711 PSD3Q9NYI0 1048 aa10.81□□□□□ -0.68
PHGDH-224ENST00000641711 HSFX1Q9UBD0 423 aa10.81□□□□□ -0.68
PHGDH-224ENST00000641711 SNX9Q9Y5X1 595 aa10.81□□□□□ -0.68
PHGDH-224ENST00000641711 PTPRDP23468 1912 aa10.81□□□□□ -0.68
PHGDH-224ENST00000641711 GOLGA6BA6NDN3 693 aa10.8□□□□□ -0.68
PHGDH-224ENST00000641711 GABRDO14764 452 aa10.8□□□□□ -0.68
PHGDH-224ENST00000641711 POLR3GO15318 223 aaPredicted RBP10.8□□□□□ -0.68
PHGDH-224ENST00000641711 TEX28O15482 410 aa10.8□□□□□ -0.68
PHGDH-224ENST00000641711 PAPLNO95428 1278 aa10.8□□□□□ -0.68
PHGDH-224ENST00000641711 LSM8O95777 96 aaKnown RBP10.8□□□□□ -0.68
PHGDH-224ENST00000641711 GLUD1P00367 558 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms