RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-223ENST00000641597 CILPO75339 1184 aa17.59■□□□□ 0.41
PHGDH-223ENST00000641597 TAP1Q03518 808 aa17.59■□□□□ 0.41
PHGDH-223ENST00000641597 DPYSL3Q14195 570 aa17.59■□□□□ 0.41
PHGDH-223ENST00000641597 HADHQ16836 314 aaKnown RBP17.59■□□□□ 0.41
PHGDH-223ENST00000641597 SLC10A6Q3KNW5 377 aa17.59■□□□□ 0.41
PHGDH-223ENST00000641597 KBTBD12Q3ZCT8 623 aa17.59■□□□□ 0.41
PHGDH-223ENST00000641597 SCYL2Q6P3W7 929 aa17.59■□□□□ 0.41
PHGDH-223ENST00000641597 LRRC6Q86X45 466 aa17.59■□□□□ 0.41
PHGDH-223ENST00000641597 NSMCE1Q8WV22 266 aa17.59■□□□□ 0.41
PHGDH-223ENST00000641597 C10orf82Q8WW14 230 aa17.59■□□□□ 0.41
PHGDH-223ENST00000641597 TMEM176AQ96HP8 235 aa17.59■□□□□ 0.41
PHGDH-223ENST00000641597 LRRC37BQ96QE4 947 aa17.59■□□□□ 0.41
PHGDH-223ENST00000641597 LHX5Q9H2C1 402 aa17.59■□□□□ 0.41
PHGDH-223ENST00000641597 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.59■□□□□ 0.41
PHGDH-223ENST00000641597 STARD13Q9Y3M8 1113 aa17.59■□□□□ 0.41
PHGDH-223ENST00000641597 MAGEB2O15479 319 aa17.59■□□□□ 0.41
PHGDH-223ENST00000641597 TGFB3P10600 412 aa17.59■□□□□ 0.41
PHGDH-223ENST00000641597 CCNB1P14635 433 aa17.59■□□□□ 0.41
PHGDH-223ENST00000641597 NDST1P52848 882 aa17.59■□□□□ 0.41
PHGDH-223ENST00000641597 SMAD1Q15797 465 aaKnown RBP17.59■□□□□ 0.41
PHGDH-223ENST00000641597 CA9Q16790 459 aa17.59■□□□□ 0.41
PHGDH-223ENST00000641597 DARS2Q6PI48 645 aaKnown RBP17.59■□□□□ 0.41
PHGDH-223ENST00000641597 FAM183BPQ6ZVS7 135 aa17.59■□□□□ 0.41
PHGDH-223ENST00000641597 ATP11CQ8NB49 1132 aa17.59■□□□□ 0.41
PHGDH-223ENST00000641597 CMASQ8NFW8 434 aaPredicted RBP17.59■□□□□ 0.41
PHGDH-223ENST00000641597 RXFP2Q8WXD0 754 aa17.59■□□□□ 0.41
PHGDH-223ENST00000641597 ACSS3Q9H6R3 686 aa17.59■□□□□ 0.41
PHGDH-223ENST00000641597 RBPJLQ9UBG7 517 aa17.59■□□□□ 0.41
PHGDH-223ENST00000641597 ZMYND8Q9ULU4 1186 aaPredicted RBP17.59■□□□□ 0.41
PHGDH-223ENST00000641597 TCRBV9S1A1TA0A576 114 aa17.58■□□□□ 0.41
PHGDH-223ENST00000641597 EIF4E1BA6NMX2 242 aaKnown RBP17.58■□□□□ 0.41
PHGDH-223ENST00000641597 PPEF2O14830 753 aa17.58■□□□□ 0.41
PHGDH-223ENST00000641597 DDNO94850 711 aaPredicted RBP17.58■□□□□ 0.41
PHGDH-223ENST00000641597 ZNF286BP0CG31 522 aa17.58■□□□□ 0.41
PHGDH-223ENST00000641597 INSRRP14616 1297 aa17.58■□□□□ 0.41
PHGDH-223ENST00000641597 EZRP15311 586 aaKnown RBP17.58■□□□□ 0.41
PHGDH-223ENST00000641597 TAZQ16635 292 aa17.58■□□□□ 0.41
PHGDH-223ENST00000641597 OR6B2Q6IFH4 312 aa17.58■□□□□ 0.41
PHGDH-223ENST00000641597 GBP7Q8N8V2 638 aaPredicted RBP17.58■□□□□ 0.41
PHGDH-223ENST00000641597 L3MBTL3Q96JM7 780 aaPredicted RBP17.58■□□□□ 0.41
PHGDH-223ENST00000641597 FAM167AQ96KS9 214 aa17.58■□□□□ 0.41
PHGDH-223ENST00000641597 B3GNT5Q9BYG0 378 aa17.58■□□□□ 0.41
PHGDH-223ENST00000641597 FAM49BQ9NUQ9 324 aa17.58■□□□□ 0.41
PHGDH-223ENST00000641597 NKX1-2Q9UD57 310 aaPredicted RBP17.58■□□□□ 0.41
PHGDH-223ENST00000641597 UGT1A9O60656 530 aa17.58■□□□□ 0.4
PHGDH-223ENST00000641597 LGR5O75473 907 aa17.58■□□□□ 0.4
PHGDH-223ENST00000641597 PDGFRAP16234 1089 aa17.58■□□□□ 0.4
PHGDH-223ENST00000641597 GM2AP17900 193 aa17.58■□□□□ 0.4
PHGDH-223ENST00000641597 ATXN1P54253 815 aaKnown RBP17.58■□□□□ 0.4
PHGDH-223ENST00000641597 FAAP100Q0VG06 881 aa17.58■□□□□ 0.4
PHGDH-223ENST00000641597 TAF1BQ53T94 588 aaPredicted RBP17.58■□□□□ 0.4
PHGDH-223ENST00000641597 PPP1R2P3Q6NXS1 205 aa17.58■□□□□ 0.4
PHGDH-223ENST00000641597 MTDHQ86UE4 582 aaKnown RBP17.58■□□□□ 0.4
PHGDH-223ENST00000641597 CFAP36Q96G28 342 aa17.58■□□□□ 0.4
PHGDH-223ENST00000641597 HPDLQ96IR7 371 aa17.58■□□□□ 0.4
PHGDH-223ENST00000641597 UGT1A7Q9HAW7 530 aa17.58■□□□□ 0.4
PHGDH-223ENST00000641597 UGT1A10Q9HAW8 530 aa17.58■□□□□ 0.4
PHGDH-223ENST00000641597 UGT1A8Q9HAW9 530 aa17.58■□□□□ 0.4
PHGDH-223ENST00000641597 GINS2Q9Y248 185 aa17.58■□□□□ 0.4
PHGDH-223ENST00000641597 SCN1AP35498 2009 aa17.57■□□□□ 0.4
PHGDH-223ENST00000641597 APOC4-APOC2K7ER74 178 aa17.57■□□□□ 0.4
PHGDH-223ENST00000641597 DIAPH2O60879 1101 aa17.57■□□□□ 0.4
PHGDH-223ENST00000641597 RNF8O76064 485 aa17.57■□□□□ 0.4
PHGDH-223ENST00000641597 C22orf31O95567 290 aa17.57■□□□□ 0.4
PHGDH-223ENST00000641597 APOC2P02655 101 aa17.57■□□□□ 0.4
PHGDH-223ENST00000641597 ARF4P18085 180 aaPredicted RBP17.57■□□□□ 0.4
PHGDH-223ENST00000641597 YWHAGP61981 247 aaKnown RBP eCLIP17.57■□□□□ 0.4
PHGDH-223ENST00000641597 NR1H3Q13133 447 aa17.57■□□□□ 0.4
PHGDH-223ENST00000641597 ACVR2BQ13705 512 aa17.57■□□□□ 0.4
PHGDH-223ENST00000641597 AMHR2Q16671 573 aa17.57■□□□□ 0.4
PHGDH-223ENST00000641597 CCDC62Q6P9F0 684 aa17.57■□□□□ 0.4
PHGDH-223ENST00000641597 ADGRD1Q6QNK2 874 aa17.57■□□□□ 0.4
PHGDH-223ENST00000641597 SCUBE3Q8IX30 993 aa17.57■□□□□ 0.4
PHGDH-223ENST00000641597 PDZD7Q9H5P4 517 aa17.57■□□□□ 0.4
PHGDH-223ENST00000641597 NGRNQ9NPE2 291 aaKnown RBP17.57■□□□□ 0.4
PHGDH-223ENST00000641597 SLC24A2Q9UI40 661 aa17.57■□□□□ 0.4
PHGDH-223ENST00000641597 SMG5Q9UPR3 1016 aaKnown RBP17.57■□□□□ 0.4
PHGDH-223ENST00000641597 NME7Q9Y5B8 376 aa17.57■□□□□ 0.4
PHGDH-223ENST00000641597 A0A0G2JMZ2 1700 aa17.57■□□□□ 0.4
PHGDH-223ENST00000641597 LRRC37A2A6NM11 1700 aa17.57■□□□□ 0.4
PHGDH-223ENST00000641597 CXorf49A8MYA2 514 aaPredicted RBP17.57■□□□□ 0.4
PHGDH-223ENST00000641597 H7C0C1 242 aa17.57■□□□□ 0.4
PHGDH-223ENST00000641597 MCF2LO15068 1137 aa17.57■□□□□ 0.4
PHGDH-223ENST00000641597 PFKMP08237 780 aa17.57■□□□□ 0.4
PHGDH-223ENST00000641597 EPHB2P29323 1055 aa17.57■□□□□ 0.4
PHGDH-223ENST00000641597 SLC8A1P32418 973 aa17.57■□□□□ 0.4
PHGDH-223ENST00000641597 ATP5OP48047 213 aa17.57■□□□□ 0.4
PHGDH-223ENST00000641597 TMEM62Q0P6H9 643 aa17.57■□□□□ 0.4
PHGDH-223ENST00000641597 RIPK1Q13546 671 aa17.57■□□□□ 0.4
PHGDH-223ENST00000641597 CDHR3Q6ZTQ4 885 aa17.57■□□□□ 0.4
PHGDH-223ENST00000641597 ILDR2Q71H61 639 aa17.57■□□□□ 0.4
PHGDH-223ENST00000641597 PDIK1LQ8N165 341 aa17.57■□□□□ 0.4
PHGDH-223ENST00000641597 MAGEC3Q8TD91 643 aa17.57■□□□□ 0.4
PHGDH-223ENST00000641597 SLC7A6OSQ96CW6 309 aaPredicted RBP17.57■□□□□ 0.4
PHGDH-223ENST00000641597 MCRS1Q96EZ8 462 aa17.57■□□□□ 0.4
PHGDH-223ENST00000641597 TSPAN16Q9UKR8 245 aa17.57■□□□□ 0.4
PHGDH-223ENST00000641597 TNFSF13BQ9Y275 285 aa17.57■□□□□ 0.4
PHGDH-223ENST00000641597 A0A0G2JND7 137 aa17.56■□□□□ 0.4
PHGDH-223ENST00000641597 MED7O43513 233 aa17.56■□□□□ 0.4
PHGDH-223ENST00000641597 HMGCRP04035 888 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms