RNA–Protein interactions for RNA: ENST00000641247.1

PHGDH-212, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-212ENST00000641247 DBX2Q6ZNG2 339 aa10.42□□□□□ -0.74
PHGDH-212ENST00000641247 CLEC17AQ6ZS10 378 aa10.42□□□□□ -0.74
PHGDH-212ENST00000641247 LURAP1LQ8IV03 231 aa10.42□□□□□ -0.74
PHGDH-212ENST00000641247 SETD7Q8WTS6 366 aaKnown RBP10.42□□□□□ -0.74
PHGDH-212ENST00000641247 FAM84AQ96KN4 292 aa10.42□□□□□ -0.74
PHGDH-212ENST00000641247 MMTAG2Q9BU76 263 aaKnown RBP10.42□□□□□ -0.74
PHGDH-212ENST00000641247 RPF1Q9H9Y2 349 aaKnown RBP10.42□□□□□ -0.74
PHGDH-212ENST00000641247 PRDM16Q9HAZ2 1276 aa10.42□□□□□ -0.74
PHGDH-212ENST00000641247 BRMS1Q9HCU9 246 aa10.42□□□□□ -0.74
PHGDH-212ENST00000641247 LRWD1Q9UFC0 647 aa10.42□□□□□ -0.74
PHGDH-212ENST00000641247 GTF3C4Q9UKN8 822 aa10.42□□□□□ -0.74
PHGDH-212ENST00000641247 CYP8B1Q9UNU6 501 aa10.42□□□□□ -0.74
PHGDH-212ENST00000641247 MTMR6Q9Y217 621 aa10.42□□□□□ -0.74
PHGDH-212ENST00000641247 GOLGA8CPA6NN73 597 aa10.41□□□□□ -0.74
PHGDH-212ENST00000641247 TISP43B9A030 160 aa10.41□□□□□ -0.74
PHGDH-212ENST00000641247 TLX3O43711 291 aaPredicted RBP10.41□□□□□ -0.74
PHGDH-212ENST00000641247 APODP05090 189 aa10.41□□□□□ -0.74
PHGDH-212ENST00000641247 NDUFV2P19404 249 aa10.41□□□□□ -0.74
PHGDH-212ENST00000641247 GRIA2P42262 883 aa10.41□□□□□ -0.74
PHGDH-212ENST00000641247 FXR2P51116 673 aaKnown RBP eCLIP10.41□□□□□ -0.744e-8■■■□□ 17.3
PHGDH-212ENST00000641247 WNT7BP56706 349 aa10.41□□□□□ -0.74
PHGDH-212ENST00000641247 CLDN6P56747 220 aa10.41□□□□□ -0.74
PHGDH-212ENST00000641247 GUCY1B3Q02153 619 aa10.41□□□□□ -0.74
PHGDH-212ENST00000641247 MYO1EQ12965 1108 aa10.41□□□□□ -0.74
PHGDH-212ENST00000641247 BYSLQ13895 437 aaKnown RBP10.41□□□□□ -0.74
PHGDH-212ENST00000641247 PDIA5Q14554 519 aa10.41□□□□□ -0.74
PHGDH-212ENST00000641247 HSF5Q4G112 596 aaPredicted RBP10.41□□□□□ -0.74
PHGDH-212ENST00000641247 LMBRD2Q68DH5 695 aaPredicted RBP10.41□□□□□ -0.74
PHGDH-212ENST00000641247 METTL23Q86XA0 190 aa10.41□□□□□ -0.74
PHGDH-212ENST00000641247 DCP1BQ8IZD4 617 aaKnown RBP10.41□□□□□ -0.74
PHGDH-212ENST00000641247 RGL4Q8IZJ4 473 aa10.41□□□□□ -0.74
PHGDH-212ENST00000641247 NAT16Q8N8M0 369 aa10.41□□□□□ -0.74
PHGDH-212ENST00000641247 DRC1Q96MC2 740 aa10.41□□□□□ -0.74
PHGDH-212ENST00000641247 IKZF4Q9H2S9 585 aa10.41□□□□□ -0.74
PHGDH-212ENST00000641247 GRPEL1Q9HAV7 217 aa10.41□□□□□ -0.74
PHGDH-212ENST00000641247 ARHGEF4Q9NR80 690 aa10.41□□□□□ -0.74
PHGDH-212ENST00000641247 DSEQ9UL01 958 aa10.41□□□□□ -0.74
PHGDH-212ENST00000641247 BTBD3Q9Y2F9 522 aa10.41□□□□□ -0.74
PHGDH-212ENST00000641247 SLCO1B1Q9Y6L6 691 aa10.41□□□□□ -0.74
PHGDH-212ENST00000641247 A0A0B4J269 797 aa10.4□□□□□ -0.74
PHGDH-212ENST00000641247 VPS37CA5D8V6 355 aaPredicted RBP10.4□□□□□ -0.74
PHGDH-212ENST00000641247 KPNA7A9QM74 516 aa10.4□□□□□ -0.74
PHGDH-212ENST00000641247 ANKRD63C9JTQ0 380 aa10.4□□□□□ -0.74
PHGDH-212ENST00000641247 H3BQV1 296 aa10.4□□□□□ -0.74
PHGDH-212ENST00000641247 OGTO15294 1046 aa10.4□□□□□ -0.74
PHGDH-212ENST00000641247 XPOTO43592 962 aaKnown RBP10.4□□□□□ -0.74
PHGDH-212ENST00000641247 TRAK2O60296 914 aa10.4□□□□□ -0.74
PHGDH-212ENST00000641247 F13A1P00488 732 aa10.4□□□□□ -0.74
PHGDH-212ENST00000641247 GUCY2CP25092 1073 aa10.4□□□□□ -0.74
PHGDH-212ENST00000641247 EIF2S3P41091 472 aaKnown RBP10.4□□□□□ -0.74
PHGDH-212ENST00000641247 TNFRSF4P43489 277 aa10.4□□□□□ -0.74
PHGDH-212ENST00000641247 ABCG1P45844 678 aa10.4□□□□□ -0.74
PHGDH-212ENST00000641247 ACOT2P49753 483 aa10.4□□□□□ -0.74
PHGDH-212ENST00000641247 TAF6P49848 677 aa10.4□□□□□ -0.74
PHGDH-212ENST00000641247 TMEM132DQ14C87 1099 aa10.4□□□□□ -0.74
PHGDH-212ENST00000641247 HAUS3Q68CZ6 603 aa10.4□□□□□ -0.74
PHGDH-212ENST00000641247 SLC36A4Q6YBV0 504 aa10.4□□□□□ -0.74
PHGDH-212ENST00000641247 PDCL2Q8N4E4 241 aa10.4□□□□□ -0.74
PHGDH-212ENST00000641247 IGSF22Q8N9C0 903 aa10.4□□□□□ -0.74
PHGDH-212ENST00000641247 SPATA18Q8TC71 538 aa10.4□□□□□ -0.74
PHGDH-212ENST00000641247 SNX29Q8TEQ0 813 aa10.4□□□□□ -0.74
PHGDH-212ENST00000641247 WASF1Q92558 559 aa10.4□□□□□ -0.74
PHGDH-212ENST00000641247 WBP2Q969T9 261 aa10.4□□□□□ -0.74
PHGDH-212ENST00000641247 CCSER1Q9C0I3 900 aa10.4□□□□□ -0.74
PHGDH-212ENST00000641247 C17orf75Q9HAS0 396 aa10.4□□□□□ -0.74
PHGDH-212ENST00000641247 SMPD4Q9NXE4 827 aa10.4□□□□□ -0.74
PHGDH-212ENST00000641247 DDX43Q9NXZ2 648 aaKnown RBP10.4□□□□□ -0.74
PHGDH-212ENST00000641247 DPP3Q9NY33 737 aa10.4□□□□□ -0.74
PHGDH-212ENST00000641247 UXTQ9UBK9 157 aaPredicted RBP10.4□□□□□ -0.74
PHGDH-212ENST00000641247 L1RE1Q9UN81 338 aa10.4□□□□□ -0.74
PHGDH-212ENST00000641247 DNM3Q9UQ16 869 aa10.4□□□□□ -0.74
PHGDH-212ENST00000641247 FNDC3AQ9Y2H6 1198 aaKnown RBP10.4□□□□□ -0.74
PHGDH-212ENST00000641247 ATP6V1DQ9Y5K8 247 aa10.4□□□□□ -0.74
PHGDH-212ENST00000641247 RAD54BQ9Y620 910 aa10.4□□□□□ -0.74
PHGDH-212ENST00000641247 TSC2P49815 1807 aa10.4□□□□□ -0.75
PHGDH-212ENST00000641247 TBC1D3BA6NDS4 549 aa10.39□□□□□ -0.75
PHGDH-212ENST00000641247 ATP2C2O75185 946 aa10.39□□□□□ -0.75
PHGDH-212ENST00000641247 CILPO75339 1184 aa10.39□□□□□ -0.75
PHGDH-212ENST00000641247 HOXB2P14652 356 aa10.39□□□□□ -0.75
PHGDH-212ENST00000641247 PAX3P23760 479 aa10.39□□□□□ -0.75
PHGDH-212ENST00000641247 EIF2DP41214 584 aaKnown RBP10.39□□□□□ -0.75
PHGDH-212ENST00000641247 NCKAP1LP55160 1127 aa10.39□□□□□ -0.75
PHGDH-212ENST00000641247 RPL10AP62906 217 aaKnown RBP10.39□□□□□ -0.75
PHGDH-212ENST00000641247 SLC7A9P82251 487 aa10.39□□□□□ -0.75
PHGDH-212ENST00000641247 RESTQ13127 1097 aa10.39□□□□□ -0.75
PHGDH-212ENST00000641247 KCNB1Q14721 858 aa10.39□□□□□ -0.75
PHGDH-212ENST00000641247 SMAD1Q15797 465 aaKnown RBP10.39□□□□□ -0.75
PHGDH-212ENST00000641247 NFE2Q16621 373 aaPredicted RBP10.39□□□□□ -0.75
PHGDH-212ENST00000641247 ARSHQ5FYA8 562 aa10.39□□□□□ -0.75
PHGDH-212ENST00000641247 INTS6LQ5JSJ4 861 aaKnown RBP10.39□□□□□ -0.75
PHGDH-212ENST00000641247 LY6G5CQ5SRR4 150 aa10.39□□□□□ -0.75
PHGDH-212ENST00000641247 FOXD4L5Q5VV16 416 aaPredicted RBP10.39□□□□□ -0.75
PHGDH-212ENST00000641247 EGFLAMQ63HQ2 1017 aa10.39□□□□□ -0.75
PHGDH-212ENST00000641247 RABEPKQ7Z6M1 372 aa10.39□□□□□ -0.75
PHGDH-212ENST00000641247 ZSCAN30Q86W11 494 aa10.39□□□□□ -0.75
PHGDH-212ENST00000641247 SCN4BQ8IWT1 228 aa10.39□□□□□ -0.75
PHGDH-212ENST00000641247 ETFBKMTQ8IXQ9 262 aa10.39□□□□□ -0.75
PHGDH-212ENST00000641247 ZNF513Q8N8E2 541 aaPredicted RBP10.39□□□□□ -0.75
PHGDH-212ENST00000641247 RHBDD1Q8TEB9 315 aa10.39□□□□□ -0.75
PHGDH-212ENST00000641247 LEO1Q8WVC0 666 aaPredicted RBP10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms