RNA–Protein interactions for RNA: ENST00000639848.1

HLA-B-256, Transcript of major histocompatibility complex, class I, B, humanhuman

BASIC

Gene HLA-B, Length 1,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-256ENST00000639848 ZNF394Q53GI3 561 aa21.39■■□□□ 1.01
HLA-B-256ENST00000639848 CT47A1Q5JQC4 288 aaPredicted RBP21.39■■□□□ 1.01
HLA-B-256ENST00000639848 SNX30Q5VWJ9 437 aa21.39■■□□□ 1.01
HLA-B-256ENST00000639848 CLEC20AQ6ZU45 233 aa21.39■■□□□ 1.01
HLA-B-256ENST00000639848 SLC4A11Q8NBS3 891 aa21.39■■□□□ 1.01
HLA-B-256ENST00000639848 LMO3Q8TAP4 145 aa21.39■■□□□ 1.01
HLA-B-256ENST00000639848 FBXO32Q969P5 355 aa21.39■■□□□ 1.01
HLA-B-256ENST00000639848 NT5C1BQ96P26 610 aa21.39■■□□□ 1.01
HLA-B-256ENST00000639848 MED15Q96RN5 788 aa21.39■■□□□ 1.01
HLA-B-256ENST00000639848 SLC22A12Q96S37 553 aa21.39■■□□□ 1.01
HLA-B-256ENST00000639848 FOXQ1Q9C009 403 aa21.39■■□□□ 1.01
HLA-B-256ENST00000639848 FBXO44Q9H4M3 255 aa21.39■■□□□ 1.01
HLA-B-256ENST00000639848 C8orf33Q9H7E9 229 aaPredicted RBP21.39■■□□□ 1.01
HLA-B-256ENST00000639848 DLGAP2Q9P1A6 1054 aa21.39■■□□□ 1.01
HLA-B-256ENST00000639848 ARHGAP26Q9UNA1 814 aa21.39■■□□□ 1.01
HLA-B-256ENST00000639848 PIAS3Q9Y6X2 628 aa21.39■■□□□ 1.01
HLA-B-256ENST00000639848 BEST1O76090 585 aa21.38■■□□□ 1.01
HLA-B-256ENST00000639848 OLFM2O95897 454 aa21.38■■□□□ 1.01
HLA-B-256ENST00000639848 OAS1P00973 400 aaKnown RBP21.38■■□□□ 1.01
HLA-B-256ENST00000639848 ERCC5P28715 1186 aaPredicted RBP21.38■■□□□ 1.01
HLA-B-256ENST00000639848 ADORA2BP29275 332 aa21.38■■□□□ 1.01
HLA-B-256ENST00000639848 PLA2G5P39877 138 aa21.38■■□□□ 1.01
HLA-B-256ENST00000639848 MAP3K7CLP57077 242 aa21.38■■□□□ 1.01
HLA-B-256ENST00000639848 TCF15Q12870 199 aa21.38■■□□□ 1.01
HLA-B-256ENST00000639848 USP4Q13107 963 aa21.38■■□□□ 1.01
HLA-B-256ENST00000639848 UBXN2BQ14CS0 331 aa21.38■■□□□ 1.01
HLA-B-256ENST00000639848 KIAA1958Q8N8K9 716 aa21.38■■□□□ 1.01
HLA-B-256ENST00000639848 ARL14EPQ8N8R7 260 aaPredicted RBP21.38■■□□□ 1.01
HLA-B-256ENST00000639848 DTWD2Q8NBA8 298 aa21.38■■□□□ 1.01
HLA-B-256ENST00000639848 HEXIM2Q96MH2 286 aaKnown RBP21.38■■□□□ 1.01
HLA-B-256ENST00000639848 CYP2S1Q96SQ9 504 aa21.38■■□□□ 1.01
HLA-B-256ENST00000639848 FAM83CQ9BQN1 747 aa21.38■■□□□ 1.01
HLA-B-256ENST00000639848 SHISA7A6NL88 538 aa21.37■■□□□ 1.01
HLA-B-256ENST00000639848 FAM170BA6NMN3 283 aa21.37■■□□□ 1.01
HLA-B-256ENST00000639848 NCAM2O15394 837 aa21.37■■□□□ 1.01
HLA-B-256ENST00000639848 TUBP50607 506 aa21.37■■□□□ 1.01
HLA-B-256ENST00000639848 SLC7A9P82251 487 aa21.37■■□□□ 1.01
HLA-B-256ENST00000639848 ZNF77Q15935 545 aa21.37■■□□□ 1.01
HLA-B-256ENST00000639848 DPCR1Q3MIW9 517 aa21.37■■□□□ 1.01
HLA-B-256ENST00000639848 PPP1R26Q5T8A7 1209 aaPredicted RBP21.37■■□□□ 1.01
HLA-B-256ENST00000639848 ARHGAP17Q68EM7 881 aa21.37■■□□□ 1.01
HLA-B-256ENST00000639848 CC2D1AQ6P1N0 951 aaPredicted RBP21.37■■□□□ 1.01
HLA-B-256ENST00000639848 UBR7Q8N806 425 aa21.37■■□□□ 1.01
HLA-B-256ENST00000639848 SCAMP5Q8TAC9 235 aa21.37■■□□□ 1.01
HLA-B-256ENST00000639848 GPT2Q8TD30 523 aa21.37■■□□□ 1.01
HLA-B-256ENST00000639848 FAM122AQ96E09 287 aa21.37■■□□□ 1.01
HLA-B-256ENST00000639848 CNOT6LQ96LI5 555 aaKnown RBP21.37■■□□□ 1.01
HLA-B-256ENST00000639848 DUSP16Q9BY84 665 aa21.37■■□□□ 1.01
HLA-B-256ENST00000639848 GKN1Q9NS71 199 aa21.37■■□□□ 1.01
HLA-B-256ENST00000639848 WDFY4Q6ZS81 3184 aa21.37■■□□□ 1.01
HLA-B-256ENST00000639848 COL4A2P08572 1712 aa21.36■■□□□ 1.01
HLA-B-256ENST00000639848 HHLA1C9JL84 531 aa21.36■■□□□ 1.01
HLA-B-256ENST00000639848 DCNP07585 359 aaKnown RBP21.36■■□□□ 1.01
HLA-B-256ENST00000639848 ZDHHC11BP0C7U3 371 aa21.36■■□□□ 1.01
HLA-B-256ENST00000639848 CD72P21854 359 aa21.36■■□□□ 1.01
HLA-B-256ENST00000639848 GCNT1Q02742 428 aa21.36■■□□□ 1.01
HLA-B-256ENST00000639848 IFRD2Q12894 506 aaPredicted RBP21.36■■□□□ 1.01
HLA-B-256ENST00000639848 PDGFRLQ15198 375 aa21.36■■□□□ 1.01
HLA-B-256ENST00000639848 RALGPS2Q86X27 583 aaPredicted RBP21.36■■□□□ 1.01
HLA-B-256ENST00000639848 EHBP1Q8NDI1 1231 aa21.36■■□□□ 1.01
HLA-B-256ENST00000639848 FAM3CQ92520 227 aa21.36■■□□□ 1.01
HLA-B-256ENST00000639848 CLDN23Q96B33 292 aa21.36■■□□□ 1.01
HLA-B-256ENST00000639848 ZFYVE19Q96K21 471 aa21.36■■□□□ 1.01
HLA-B-256ENST00000639848 KIAA1257Q9ULG3 409 aa21.36■■□□□ 1.01
HLA-B-256ENST00000639848 MBD3O95983 291 aa21.35■■□□□ 1.01
HLA-B-256ENST00000639848 TARSP26639 723 aaKnown RBP21.35■■□□□ 1.01
HLA-B-256ENST00000639848 RPS9P46781 194 aaKnown RBP21.35■■□□□ 1.01
HLA-B-256ENST00000639848 KPNA1P52294 538 aaPredicted RBP21.35■■□□□ 1.01
HLA-B-256ENST00000639848 LRMPQ12912 555 aa21.35■■□□□ 1.01
HLA-B-256ENST00000639848 MTF1Q14872 753 aa21.35■■□□□ 1.01
HLA-B-256ENST00000639848 TPD52L1Q16890 204 aaPredicted RBP21.35■■□□□ 1.01
HLA-B-256ENST00000639848 ITPRIPL2Q3MIP1 535 aa21.35■■□□□ 1.01
HLA-B-256ENST00000639848 RBM43Q6ZSC3 357 aaKnown RBP21.35■■□□□ 1.01
HLA-B-256ENST00000639848 IRF2BP1Q8IU81 584 aa21.35■■□□□ 1.01
HLA-B-256ENST00000639848 ZNF687Q8N1G0 1237 aa21.35■■□□□ 1.01
HLA-B-256ENST00000639848 PPM1KQ8N3J5 372 aa21.35■■□□□ 1.01
HLA-B-256ENST00000639848 RIN3Q8TB24 985 aa21.35■■□□□ 1.01
HLA-B-256ENST00000639848 SH3RF2Q8TEC5 729 aa21.35■■□□□ 1.01
HLA-B-256ENST00000639848 UBXN6Q9BZV1 441 aa21.35■■□□□ 1.01
HLA-B-256ENST00000639848 THAP9Q9H5L6 903 aa21.35■■□□□ 1.01
HLA-B-256ENST00000639848 SCML2Q9UQR0 700 aa21.35■■□□□ 1.01
HLA-B-256ENST00000639848 MTF2Q9Y483 593 aaPredicted RBP21.35■■□□□ 1.01
HLA-B-256ENST00000639848 GREB1Q4ZG55 1949 aa21.35■■□□□ 1.01
HLA-B-256ENST00000639848 OBSL1O75147 1896 aa21.35■■□□□ 1.01
HLA-B-256ENST00000639848 DENND4CQ5VZ89 1909 aa21.34■■□□□ 1.01
HLA-B-256ENST00000639848 ABL1P00519 1130 aa21.34■■□□□ 1.01
HLA-B-256ENST00000639848 PAEPP09466 180 aa21.34■■□□□ 1.01
HLA-B-256ENST00000639848 CTHP32929 405 aa21.34■■□□□ 1.01
HLA-B-256ENST00000639848 SLC8A3P57103 927 aa21.34■■□□□ 1.01
HLA-B-256ENST00000639848 NHLH1Q02575 133 aa21.34■■□□□ 1.01
HLA-B-256ENST00000639848 RUNX3Q13761 415 aa21.34■■□□□ 1.01
HLA-B-256ENST00000639848 HECTD3Q5T447 861 aa21.34■■□□□ 1.01
HLA-B-256ENST00000639848 DDX42Q86XP3 938 aaKnown RBP eCLIP21.34■■□□□ 1.01
HLA-B-256ENST00000639848 FAM114A1Q8IWE2 563 aa21.34■■□□□ 1.01
HLA-B-256ENST00000639848 ANKRD52Q8NB46 1076 aa21.34■■□□□ 1.01
HLA-B-256ENST00000639848 OSCP1Q8WVF1 389 aa21.34■■□□□ 1.01
HLA-B-256ENST00000639848 JAKMIP2Q96AA8 810 aa21.34■■□□□ 1.01
HLA-B-256ENST00000639848 RNF38Q9H0F5 515 aa21.34■■□□□ 1.01
HLA-B-256ENST00000639848 TLR8Q9NR97 1041 aaKnown RBP21.34■■□□□ 1.01
HLA-B-256ENST00000639848 GTSE1Q9NYZ3 720 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms