RNA–Protein interactions for RNA: ENST00000638883.1

NECAP1-213, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,940 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-213ENST00000638883 RETREG3Q86VR2 466 aa7.41□□□□□ -1.22
NECAP1-213ENST00000638883 GRAMD2AQ8IUY3 354 aa7.41□□□□□ -1.22
NECAP1-213ENST00000638883 LRRC49Q8IUZ0 686 aa7.41□□□□□ -1.22
NECAP1-213ENST00000638883 SPERTQ8NA61 448 aa7.41□□□□□ -1.22
NECAP1-213ENST00000638883 ZNF384Q8TF68 577 aa7.41□□□□□ -1.22
NECAP1-213ENST00000638883 CSRNP1Q96S65 589 aa7.41□□□□□ -1.22
NECAP1-213ENST00000638883 HGH1Q9BTY7 390 aa7.41□□□□□ -1.22
NECAP1-213ENST00000638883 CCSER1Q9C0I3 900 aa7.41□□□□□ -1.22
NECAP1-213ENST00000638883 ZDHHC18Q9NUE0 388 aa7.41□□□□□ -1.22
NECAP1-213ENST00000638883 SIK3Q9Y2K2 1263 aa7.41□□□□□ -1.22
NECAP1-213ENST00000638883 TTLL3Q9Y4R7 772 aa7.41□□□□□ -1.22
NECAP1-213ENST00000638883 SYNGAP1Q96PV0 1343 aa7.41□□□□□ -1.22
NECAP1-213ENST00000638883 POTECB2RU33 542 aa7.41□□□□□ -1.22
NECAP1-213ENST00000638883 GOLGA8RI6L899 631 aa7.41□□□□□ -1.22
NECAP1-213ENST00000638883 J3QRK9 145 aa7.41□□□□□ -1.22
NECAP1-213ENST00000638883 POLR2MP0CAP2 368 aa7.41□□□□□ -1.22
NECAP1-213ENST00000638883 CHRNB1P11230 501 aa7.41□□□□□ -1.22
NECAP1-213ENST00000638883 KRT3P12035 628 aa7.41□□□□□ -1.22
NECAP1-213ENST00000638883 PHKA2P46019 1235 aa7.41□□□□□ -1.22
NECAP1-213ENST00000638883 IREB2P48200 963 aaKnown RBP7.41□□□□□ -1.22
NECAP1-213ENST00000638883 CSE1LP55060 971 aaKnown RBP7.41□□□□□ -1.22
NECAP1-213ENST00000638883 MESDQ14696 234 aa7.41□□□□□ -1.22
NECAP1-213ENST00000638883 KCNJ8Q15842 424 aa7.41□□□□□ -1.22
NECAP1-213ENST00000638883 PDK4Q16654 411 aa7.41□□□□□ -1.22
NECAP1-213ENST00000638883 SGO2Q562F6 1265 aa7.41□□□□□ -1.22
NECAP1-213ENST00000638883 ZNF618Q5T7W0 954 aa7.41□□□□□ -1.22
NECAP1-213ENST00000638883 TUBA3EQ6PEY2 450 aa7.41□□□□□ -1.22
NECAP1-213ENST00000638883 DCDC5Q6ZRR9 648 aa7.41□□□□□ -1.22
NECAP1-213ENST00000638883 FRA10AC1Q70Z53 315 aa7.41□□□□□ -1.22
NECAP1-213ENST00000638883 SGMS1Q86VZ5 419 aa7.41□□□□□ -1.22
NECAP1-213ENST00000638883 ZNF34Q8IZ26 560 aa7.41□□□□□ -1.22
NECAP1-213ENST00000638883 ZNF654Q8IZM8 581 aa7.41□□□□□ -1.22
NECAP1-213ENST00000638883 DCLK2Q8N568 766 aa7.41□□□□□ -1.22
NECAP1-213ENST00000638883 SRBD1Q8N5C6 995 aaKnown RBP7.41□□□□□ -1.22
NECAP1-213ENST00000638883 C10orf82Q8WW14 230 aa7.41□□□□□ -1.22
NECAP1-213ENST00000638883 FBXL8Q96CD0 374 aa7.41□□□□□ -1.22
NECAP1-213ENST00000638883 ZNF512BQ96KM6 892 aaPredicted RBP7.41□□□□□ -1.22
NECAP1-213ENST00000638883 ZNF287Q9HBT7 754 aa7.41□□□□□ -1.22
NECAP1-213ENST00000638883 S100A14Q9HCY8 104 aa7.41□□□□□ -1.22
NECAP1-213ENST00000638883 HDAC9Q9UKV0 1011 aa7.41□□□□□ -1.22
NECAP1-213ENST00000638883 INPP5FQ9Y2H2 1132 aa7.41□□□□□ -1.22
NECAP1-213ENST00000638883 PCDHGA3Q9Y5H0 932 aa7.41□□□□□ -1.22
NECAP1-213ENST00000638883 CEP350Q5VT06 3117 aa7.4□□□□□ -1.22
NECAP1-213ENST00000638883 MYOCOSA0A1B0GUC4 107 aa7.4□□□□□ -1.22
NECAP1-213ENST00000638883 CYP26A1O43174 497 aa7.4□□□□□ -1.22
NECAP1-213ENST00000638883 ITM2AO43736 263 aa7.4□□□□□ -1.22
NECAP1-213ENST00000638883 MTRF1O75570 445 aaKnown RBP7.4□□□□□ -1.22
NECAP1-213ENST00000638883 CAMTA2O94983 1202 aa7.4□□□□□ -1.22
NECAP1-213ENST00000638883 STAT1P42224 750 aa7.4□□□□□ -1.22
NECAP1-213ENST00000638883 ECE1P42892 770 aa7.4□□□□□ -1.22
NECAP1-213ENST00000638883 DRG2P55039 364 aaKnown RBP7.4□□□□□ -1.22
NECAP1-213ENST00000638883 WDR4P57081 412 aaKnown RBP7.4□□□□□ -1.22
NECAP1-213ENST00000638883 ACTR3P61158 418 aa7.4□□□□□ -1.22
NECAP1-213ENST00000638883 XIAPP98170 497 aa7.4□□□□□ -1.22
NECAP1-213ENST00000638883 SMU1Q2TAY7 513 aa7.4□□□□□ -1.22
NECAP1-213ENST00000638883 DCAF6Q58WW2 860 aa7.4□□□□□ -1.22
NECAP1-213ENST00000638883 C4orf22Q6V702 233 aa7.4□□□□□ -1.22
NECAP1-213ENST00000638883 SH3BP5LQ7L8J4 393 aa7.4□□□□□ -1.22
NECAP1-213ENST00000638883 FAM160A2Q8N612 972 aaPredicted RBP7.4□□□□□ -1.22
NECAP1-213ENST00000638883 RBM15BQ8NDT2 890 aaKnown RBP7.4□□□□□ -1.22
NECAP1-213ENST00000638883 BAP1Q92560 729 aa7.4□□□□□ -1.22
NECAP1-213ENST00000638883 DACT3Q96B18 629 aaPredicted RBP7.4□□□□□ -1.22
NECAP1-213ENST00000638883 MANSC1Q9H8J5 431 aa7.4□□□□□ -1.22
NECAP1-213ENST00000638883 TXNDC16Q9P2K2 825 aa7.4□□□□□ -1.22
NECAP1-213ENST00000638883 NAGPAQ9UK23 515 aa7.4□□□□□ -1.22
NECAP1-213ENST00000638883 ANGPTL3Q9Y5C1 460 aa7.4□□□□□ -1.22
NECAP1-213ENST00000638883 COL4A3BPQ9Y5P4 624 aa7.4□□□□□ -1.22
NECAP1-213ENST00000638883 AP4B1Q9Y6B7 739 aa7.4□□□□□ -1.22
NECAP1-213ENST00000638883 WDR19Q8NEZ3 1342 aa7.4□□□□□ -1.22
NECAP1-213ENST00000638883 ATG2AQ2TAZ0 1938 aa7.4□□□□□ -1.22
NECAP1-213ENST00000638883 NID2Q14112 1375 aa7.4□□□□□ -1.22
NECAP1-213ENST00000638883 A0A1W2PQ67 120 aa7.4□□□□□ -1.22
NECAP1-213ENST00000638883 CCRL2O00421 344 aa7.4□□□□□ -1.22
NECAP1-213ENST00000638883 PDE8AO60658 829 aa7.4□□□□□ -1.22
NECAP1-213ENST00000638883 P4HA1P13674 534 aa7.4□□□□□ -1.22
NECAP1-213ENST00000638883 CDH2P19022 906 aaPredicted RBP7.4□□□□□ -1.22
NECAP1-213ENST00000638883 SERPINB1P30740 379 aa7.4□□□□□ -1.22
NECAP1-213ENST00000638883 PRKCIP41743 596 aa7.4□□□□□ -1.22
NECAP1-213ENST00000638883 ALDH1A3P47895 512 aa7.4□□□□□ -1.22
NECAP1-213ENST00000638883 KRT6CP48668 564 aa7.4□□□□□ -1.22
NECAP1-213ENST00000638883 PRAMEP78395 509 aa7.4□□□□□ -1.22
NECAP1-213ENST00000638883 FKBP3Q00688 224 aaKnown RBP7.4□□□□□ -1.22
NECAP1-213ENST00000638883 ZNF829Q3KNS6 432 aaPredicted RBP7.4□□□□□ -1.22
NECAP1-213ENST00000638883 TIGD2Q4W5G0 525 aa7.4□□□□□ -1.22
NECAP1-213ENST00000638883 XKR5Q6UX68 686 aa7.4□□□□□ -1.22
NECAP1-213ENST00000638883 ZNF410Q86VK4 478 aa7.4□□□□□ -1.22
NECAP1-213ENST00000638883 FAM20CQ8IXL6 584 aa7.4□□□□□ -1.22
NECAP1-213ENST00000638883 BBOF1Q8ND07 529 aa7.4□□□□□ -1.22
NECAP1-213ENST00000638883 CATSPER1Q8NEC5 780 aa7.4□□□□□ -1.22
NECAP1-213ENST00000638883 FAM172AQ8WUF8 416 aa7.4□□□□□ -1.22
NECAP1-213ENST00000638883 ATP2A3Q93084 1043 aa7.4□□□□□ -1.22
NECAP1-213ENST00000638883 TLE6Q9H808 572 aa7.4□□□□□ -1.22
NECAP1-213ENST00000638883 PARVGQ9HBI0 331 aa7.4□□□□□ -1.22
NECAP1-213ENST00000638883 SACM1LQ9NTJ5 587 aa7.4□□□□□ -1.22
NECAP1-213ENST00000638883 EXOC7Q9UPT5 735 aa7.4□□□□□ -1.22
NECAP1-213ENST00000638883 STXBP5LQ9Y2K9 1186 aa7.4□□□□□ -1.22
NECAP1-213ENST00000638883 NOP56O00567 594 aaKnown RBP7.4□□□□□ -1.23
NECAP1-213ENST00000638883 UGT1A9O60656 530 aa7.4□□□□□ -1.23
NECAP1-213ENST00000638883 MAGEC1O60732 1142 aa7.4□□□□□ -1.23
NECAP1-213ENST00000638883 UGT1A6P19224 532 aa7.4□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms