RNA–Protein interactions for RNA: ENST00000638853.1

PAX6-241, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 1,248 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-241ENST00000638853 ENGP17813 658 aa12.42□□□□□ -0.42
PAX6-241ENST00000638853 LHX1P48742 406 aa12.42□□□□□ -0.42
PAX6-241ENST00000638853 PSMC1P62191 440 aaKnown RBP12.42□□□□□ -0.42
PAX6-241ENST00000638853 ASIC1P78348 528 aa12.42□□□□□ -0.42
PAX6-241ENST00000638853 MYL7Q01449 175 aa12.42□□□□□ -0.42
PAX6-241ENST00000638853 PKP1Q13835 747 aa12.42□□□□□ -0.42
PAX6-241ENST00000638853 PDGFRLQ15198 375 aa12.42□□□□□ -0.42
PAX6-241ENST00000638853 DUOXA2Q1HG44 320 aa12.42□□□□□ -0.42
PAX6-241ENST00000638853 COL28A1Q2UY09 1125 aa12.42□□□□□ -0.42
PAX6-241ENST00000638853 ARMCX6Q7L4S7 300 aa12.42□□□□□ -0.42
PAX6-241ENST00000638853 TRAPPC11Q7Z392 1133 aa12.42□□□□□ -0.42
PAX6-241ENST00000638853 SCN4BQ8IWT1 228 aa12.42□□□□□ -0.42
PAX6-241ENST00000638853 CPA6Q8N4T0 437 aa12.42□□□□□ -0.42
PAX6-241ENST00000638853 ZNF396Q96N95 335 aaPredicted RBP12.42□□□□□ -0.42
PAX6-241ENST00000638853 MRPL45Q9BRJ2 306 aaKnown RBP12.42□□□□□ -0.42
PAX6-241ENST00000638853 BLZF1Q9H2G9 400 aa12.42□□□□□ -0.42
PAX6-241ENST00000638853 KIF9Q9HAQ2 790 aa12.42□□□□□ -0.42
PAX6-241ENST00000638853 ABCB6Q9NP58 842 aa12.42□□□□□ -0.42
PAX6-241ENST00000638853 AGPAT3Q9NRZ7 376 aa12.42□□□□□ -0.42
PAX6-241ENST00000638853 PCDHA7Q9UN72 937 aa12.42□□□□□ -0.42
PAX6-241ENST00000638853 PTPRDP23468 1912 aa12.42□□□□□ -0.42
PAX6-241ENST00000638853 TCHHQ07283 1943 aa12.42□□□□□ -0.42
PAX6-241ENST00000638853 PCNX2A6NKB5 2137 aa12.41□□□□□ -0.42
PAX6-241ENST00000638853 ADAMTS9Q9P2N4 1935 aa12.41□□□□□ -0.42
PAX6-241ENST00000638853 KIAA0391O15091 583 aaKnown RBP12.41□□□□□ -0.42
PAX6-241ENST00000638853 POLR2DO15514 142 aaKnown RBP12.41□□□□□ -0.42
PAX6-241ENST00000638853 DDX6P26196 483 aaKnown RBP eCLIP12.41□□□□□ -0.42
PAX6-241ENST00000638853 RDXP35241 583 aaKnown RBP12.41□□□□□ -0.42
PAX6-241ENST00000638853 USP46P62068 366 aa12.41□□□□□ -0.42
PAX6-241ENST00000638853 RPL10AP62906 217 aaKnown RBP12.41□□□□□ -0.42
PAX6-241ENST00000638853 ZXDBP98169 803 aa12.41□□□□□ -0.42
PAX6-241ENST00000638853 SEMA3BQ13214 749 aa12.41□□□□□ -0.42
PAX6-241ENST00000638853 CFAP221Q4G0U5 840 aa12.41□□□□□ -0.42
PAX6-241ENST00000638853 FAM26FQ5R3K3 315 aa12.41□□□□□ -0.42
PAX6-241ENST00000638853 DPH6Q7L8W6 267 aa12.41□□□□□ -0.42
PAX6-241ENST00000638853 RASSF3Q86WH2 238 aa12.41□□□□□ -0.42
PAX6-241ENST00000638853 SPATA2LQ8IUW3 424 aaPredicted RBP12.41□□□□□ -0.42
PAX6-241ENST00000638853 NELFCDQ8IXH7 590 aa12.41□□□□□ -0.42
PAX6-241ENST00000638853 GRAMD1CQ8IYS0 662 aa12.41□□□□□ -0.42
PAX6-241ENST00000638853 IQUBQ8NA54 791 aa12.41□□□□□ -0.42
PAX6-241ENST00000638853 MDGA1Q8NFP4 955 aa12.41□□□□□ -0.42
PAX6-241ENST00000638853 PLEKHO2Q8TD55 490 aa12.41□□□□□ -0.42
PAX6-241ENST00000638853 TRMT2BQ96GJ1 504 aaKnown RBP12.41□□□□□ -0.42
PAX6-241ENST00000638853 ANKRD36BP1Q96IX9 119 aa12.41□□□□□ -0.42
PAX6-241ENST00000638853 CNOT6LQ96LI5 555 aaKnown RBP12.41□□□□□ -0.42
PAX6-241ENST00000638853 LINC00597Q9H2U6 94 aa12.41□□□□□ -0.42
PAX6-241ENST00000638853 CUEDC2Q9H467 287 aa12.41□□□□□ -0.42
PAX6-241ENST00000638853 ECT2Q9H8V3 914 aa12.41□□□□□ -0.42
PAX6-241ENST00000638853 TMEM74BQ9NUR3 256 aa12.41□□□□□ -0.42
PAX6-241ENST00000638853 GCNT4Q9P109 453 aa12.41□□□□□ -0.42
PAX6-241ENST00000638853 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.4□□□□□ -0.42
PAX6-241ENST00000638853 C2orf78A6NCI8 922 aa12.4□□□□□ -0.42
PAX6-241ENST00000638853 ANTXRLA6NF34 631 aa12.4□□□□□ -0.42
PAX6-241ENST00000638853 UPK3BL1B0FP48 263 aa12.4□□□□□ -0.42
PAX6-241ENST00000638853 UPK3BL2E5RIL1 263 aa12.4□□□□□ -0.42
PAX6-241ENST00000638853 EIF3DO15371 548 aaKnown RBP eCLIP12.4□□□□□ -0.42
PAX6-241ENST00000638853 TNNC2P02585 160 aa12.4□□□□□ -0.42
PAX6-241ENST00000638853 ZSCAN22P10073 491 aaPredicted RBP12.4□□□□□ -0.42
PAX6-241ENST00000638853 DLATP10515 647 aaKnown RBP12.4□□□□□ -0.42
PAX6-241ENST00000638853 WARSP23381 471 aaKnown RBP12.4□□□□□ -0.42
PAX6-241ENST00000638853 BDNFP23560 247 aa12.4□□□□□ -0.42
PAX6-241ENST00000638853 PCSK1P29120 753 aa12.4□□□□□ -0.42
PAX6-241ENST00000638853 PTGER3P43115 390 aa12.4□□□□□ -0.42
PAX6-241ENST00000638853 MAGEA11P43364 429 aa12.4□□□□□ -0.42
PAX6-241ENST00000638853 CACNA2D1P54289 1103 aa12.4□□□□□ -0.42
PAX6-241ENST00000638853 SEC13P55735 322 aa12.4□□□□□ -0.42
PAX6-241ENST00000638853 FAM193AP78312 1265 aa12.4□□□□□ -0.42
PAX6-241ENST00000638853 CYP24A1Q07973 514 aa12.4□□□□□ -0.42
PAX6-241ENST00000638853 SCAPQ12770 1279 aa12.4□□□□□ -0.42
PAX6-241ENST00000638853 MYO1EQ12965 1108 aa12.4□□□□□ -0.42
PAX6-241ENST00000638853 CUL4BQ13620 913 aa12.4□□□□□ -0.42
PAX6-241ENST00000638853 ZNF268Q14587 947 aaPredicted RBP12.4□□□□□ -0.42
PAX6-241ENST00000638853 SNRNP35Q16560 246 aaKnown RBP12.4□□□□□ -0.42
PAX6-241ENST00000638853 C2orf27AQ580R0 203 aa12.4□□□□□ -0.42
PAX6-241ENST00000638853 UNC13DQ70J99 1090 aa12.4□□□□□ -0.42
PAX6-241ENST00000638853 LPCAT2Q7L5N7 544 aa12.4□□□□□ -0.42
PAX6-241ENST00000638853 TTC30AQ86WT1 665 aa12.4□□□□□ -0.42
PAX6-241ENST00000638853 SYT12Q8IV01 421 aa12.4□□□□□ -0.42
PAX6-241ENST00000638853 WDR49Q8IV35 697 aa12.4□□□□□ -0.42
PAX6-241ENST00000638853 ARL14EPQ8N8R7 260 aaPredicted RBP12.4□□□□□ -0.42
PAX6-241ENST00000638853 TTC16Q8NEE8 873 aa12.4□□□□□ -0.42
PAX6-241ENST00000638853 SPATA18Q8TC71 538 aa12.4□□□□□ -0.42
PAX6-241ENST00000638853 USP33Q8TEY7 942 aa12.4□□□□□ -0.42
PAX6-241ENST00000638853 OSCP1Q8WVF1 389 aa12.4□□□□□ -0.42
PAX6-241ENST00000638853 RLN3Q8WXF3 142 aa12.4□□□□□ -0.42
PAX6-241ENST00000638853 MRPS31Q92665 395 aaKnown RBP12.4□□□□□ -0.42
PAX6-241ENST00000638853 MYLPFQ96A32 169 aa12.4□□□□□ -0.42
PAX6-241ENST00000638853 ELMO3Q96BJ8 720 aa12.4□□□□□ -0.42
PAX6-241ENST00000638853 SYT15Q9BQS2 421 aa12.4□□□□□ -0.42
PAX6-241ENST00000638853 LRRC27Q9C0I9 530 aa12.4□□□□□ -0.42
PAX6-241ENST00000638853 SLC39A2Q9NP94 309 aa12.4□□□□□ -0.42
PAX6-241ENST00000638853 TMEM30AQ9NV96 361 aa12.4□□□□□ -0.42
PAX6-241ENST00000638853 DUS2Q9NX74 493 aaKnown RBP12.4□□□□□ -0.42
PAX6-241ENST00000638853 MAGEC2Q9UBF1 373 aaPredicted RBP12.4□□□□□ -0.42
PAX6-241ENST00000638853 MBD1Q9UIS9 605 aaPredicted RBP12.4□□□□□ -0.42
PAX6-241ENST00000638853 CIZ1Q9ULV3 898 aaPredicted RBP12.4□□□□□ -0.42
PAX6-241ENST00000638853 CACNA1EQ15878 2313 aa12.4□□□□□ -0.42
PAX6-241ENST00000638853 ATXN2Q99700 1313 aaKnown RBP12.39□□□□□ -0.43
PAX6-241ENST00000638853 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.39□□□□□ -0.43
PAX6-241ENST00000638853 TNFRSF10BO14763 440 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms